nLs.2.1.2.g05683 (Litomosoides sigmodontis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nLs.2.1.2.g05683 T235421_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG24578
M02065_2.00 		Caenorhabditis briggsae
NNNTGACAKSTN
NASMTGTCANNN		 PBM
Weirauch et al.(2014)
pTH6524 		0.599 0.472
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nLs.2.1.2.t05683-RA Homeodomain 164 220

Links

Other Homeodomain family TFs
Other Litomosoides sigmodontis TFs

18 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g05377 Acanthocheilonema viteae nAv.1.0.1.g05377 I 0.867
WBGene00242324 Onchocerca volvulus WBGene00242324 I 0.858
nDi.2.2.2.g04955 Dirofilaria immitis nDi.2.2.2.g04955 I 0.858
Bm10123 Brugia malayi Bm10123 I 0.858
BTMF_0000901301 Brugia timori BTMF_0000901301 I 0.858
SLOPH_443 Spraguea lophii SLOPH_443 I 0.666
GPLIN_000275800 Globodera pallida GPLIN_000275800 I 0.663
HMEL005588 Heliconius melpomene HMEL005588 I 0.604
DAPPUDRAFT_314795 Daphnia pulex DAPPUDRAFT_314795 I 0.604
KGM_17297 Danaus plexippus KGM_17297 I 0.604
ASU_10550 Ascaris suum ASU_10550 I 0.599
AALB005452 Anopheles albimanus AALB005452 I 0.599
TriadG9468 Trichoplax adhaerens TriadG9468 I 0.599
CBG24578 Caenorhabditis briggsae CBG24578 D 0.599
CJA02489 Caenorhabditis japonica CJA02489 I 0.599
CRE18960 Caenorhabditis remanei CRE18960 I 0.599
unc-62 Caenorhabditis elegans WBGene00006796 D 0.599
XP_002647234.1 Caenorhabditis briggsae XP_002647234.1 I 0.599