nRc.2.0.1.g07191 (Romanomermis culicivorax)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 nRc.2.0.1.g07191 T235511_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Mnx1
M00388_2.00 		Mus musculus
NTAATBDNNN
NNNHVATTAN		 PBM
Berger et al.(2008)
Hlxb9_3422 		0.613 0.855
MNX1
M03143_2.00 		Homo sapiens
NHTAATTRNH
DNYAATTADN		 SELEX
Jolma et al.(2013)
MNX1_1 		0.613 0.855
MNX1
M05126_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_HT-SELEX 		0.613 0.855
MNX1
M05127_2.00 		Homo sapiens
HTAAYGHB
VDCRTTAD		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_1 		0.613 0.855
MNX1
M05128_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Yin et al.(2017)
MNX1_eDBD_Methyl-HT-SELEX_2 		0.613 0.855
exex
M03871_2.00 		Drosophila melanogaster
NNNNYAATTNNYDN
NHRNNAATTRNNNN		 SELEX
Nitta et al.(2015)
exex_1 		0.601 0.800
exex
M06544_2.00 		Drosophila melanogaster
BTAATTA
TAATTAV		 B1H
Mathelier et al.(2014)
MA0224.1 		0.601 0.800
exex
M06364_2.00 		Drosophila melanogaster
TAATTAV
BTAATTA		 B1H
Zhu et al.(2011)
Exex_Cell_FBgn0041156 		0.601 0.800
exex
M06365_2.00 		Drosophila melanogaster
TAATBR
YVATTA		 B1H
Zhu et al.(2011)
Exex_SOLEXA_FBgn0041156 		0.601 0.800
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
nRc.2.0.1.t07191-RA Homeodomain 139 193

Links

Other Homeodomain family TFs
Other Romanomermis culicivorax TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HOXB2 Sorex araneus ENSSARG00000008539 I 0.782
ENSSSCG00000009315 Sus scrofa ENSSSCG00000009315 I 0.762
ENSNLEG00000015091 Nomascus leucogenys ENSNLEG00000015091 I 0.656
ALX4 Taeniopygia guttata ENSTGUG00000010263 I 0.636
nkx1.2la Tetraodon nigroviridis ENSTNIG00000013347 I 0.632
MNX1 Pan troglodytes ENSPTRG00000019918 I 0.613
Mnx1 Rattus norvegicus ENSRNOG00000046959 I 0.613
MNX1 Sus scrofa ENSSSCG00000016410 I 0.613
ENSTGUG00000005702 Taeniopygia guttata ENSTGUG00000005702 I 0.613
ENSTGUG00000000706 Taeniopygia guttata ENSTGUG00000000706 I 0.613
ENSPPYG00000018223 Pongo abelii ENSPPYG00000018223 I 0.613
ENSSHAG00000018063 Sarcophilus harrisii ENSSHAG00000018063 I 0.613
ENSPANG00000023831 Papio anubis ENSPANG00000023831 I 0.613
ENSONIG00000003362 Oreochromis niloticus ENSONIG00000003362 I 0.613
MNX1 Otolemur garnettii ENSOGAG00000026453 I 0.613
ENSOCUG00000016044 Oryctolagus cuniculus ENSOCUG00000016044 I 0.613
ENSONIG00000004351 Oreochromis niloticus ENSONIG00000004351 I 0.613
ENSONIG00000005962 Oreochromis niloticus ENSONIG00000005962 I 0.613
ENSORLG00000018251 Oryzias latipes ENSORLG00000018251 I 0.613
mnx1 Oryzias latipes ENSORLG00000010549 I 0.613
mnx2b Oryzias latipes ENSORLG00000003773 I 0.613
ENSPFOG00000015811 Poecilia formosa ENSPFOG00000015811 I 0.613
mnx1 Tetraodon nigroviridis ENSTNIG00000012784 I 0.613
Pvit_08787 Pogona vitticeps Pvit_08787 I 0.613
Pvit_04420 Pogona vitticeps Pvit_04420 I 0.613
Ogr12822 Ophisaurus gracilis Ogr12822 I 0.613
Ogr11862 Ophisaurus gracilis Ogr11862 I 0.613
e_gw.601.16.1 Branchiostoma floridae e_gw.601.16.1 I 0.613
mnx1.L Xenopus laevis XB-GENE-1113190 I 0.613
XP_002934006 Xenopus tropicalis XP_002934006 I 0.613
mnx1 Xenopus tropicalis XB-GENE-919890 I 0.613
mnx1.S Xenopus laevis XB-GENE-17345444 I 0.613
Gfo_R001263 Geospiza fortis Gfo_R001263 I 0.613
Brh_R009157 Buceros rhinoceros Brh_R009157 I 0.613
mnx1 Takifugu rubripes ENSTRUG00000010178 I 0.613
mnx2b Takifugu rubripes ENSTRUG00000004181 I 0.613
ENSTNIG00000017046 Tetraodon nigroviridis ENSTNIG00000017046 I 0.613
ENSOANG00000006138 Ornithorhynchus anatinus ENSOANG00000006138 I 0.613
ENSXMAG00000002449 Xiphophorus maculatus ENSXMAG00000002449 I 0.613
PHUM035300 Pediculus humanus PHUM035300 I 0.613
Afo_R006770 Aptenodytes forsteri Afo_R006770 I 0.613
Aan_R004242 Calypte anna Aan_R004242 I 0.613
Aan_R003589 Calypte anna Aan_R003589 I 0.613
mnx2b Tetraodon nigroviridis ENSTNIG00000009481 I 0.613
ENSSTOG00000004788 Ictidomys tridecemlineatus ENSSTOG00000004788 I 0.613
mnx2a Danio rerio ENSDARG00000042106 I 0.613
mnx1 Danio rerio ENSDARG00000035984 I 0.613
mnx2b Danio rerio ENSDARG00000030350 I 0.613
ENSFALG00000004173 Ficedula albicollis ENSFALG00000004173 I 0.613
ENSFALG00000006908 Ficedula albicollis ENSFALG00000006908 I 0.613
mnx2b Gasterosteus aculeatus ENSGACG00000015160 I 0.613
mnx1 Gasterosteus aculeatus ENSGACG00000003933 I 0.613
ENSFCAG00000030384 Felis catus ENSFCAG00000030384 I 0.613
ENSCSAG00000006434 Chlorocebus sabaeus ENSCSAG00000006434 I 0.613
ENSACAG00000005185 Anolis carolinensis ENSACAG00000005185 I 0.613
MNX1 Canis familiaris ENSCAFG00000005148 I 0.613
ENSCJAG00000004326 Callithrix jacchus ENSCJAG00000004326 I 0.613
ENSCPOG00000022207 Cavia porcellus ENSCPOG00000022207 I 0.613
ENSAMXG00000008716 Astyanax mexicanus ENSAMXG00000008716 I 0.613
ENSAMXG00000005665 Astyanax mexicanus ENSAMXG00000005665 I 0.613
ENSACAG00000011211 Anolis carolinensis ENSACAG00000011211 I 0.613
ENSAMEG00000001408 Ailuropoda melanoleuca ENSAMEG00000001408 I 0.613
ENSGALG00000006438 Gallus gallus ENSGALG00000006438 I 0.613
MNX1 Homo sapiens ENSG00000130675 D 0.613
ENSLAFG00000027756 Loxodonta africana ENSLAFG00000027756 I 0.613
ENSMGAG00000005066 Meleagris gallopavo ENSMGAG00000005066 I 0.613
ENSMPUG00000009771 Mustela putorius furo ENSMPUG00000009771 I 0.613
ENSLACG00000015145 Latimeria chalumnae ENSLACG00000015145 I 0.613
ENSGALG00000011349 Gallus gallus ENSGALG00000011349 I 0.613
MNX1 Monodelphis domestica ENSMODG00000005191 I 0.613
ENSLACG00000012409 Latimeria chalumnae ENSLACG00000012409 I 0.613
ENSLOCG00000010942 Lepisosteus oculatus ENSLOCG00000010942 I 0.613
ENSGGOG00000005374 Gorilla gorilla ENSGGOG00000005374 I 0.613
ENSLOCG00000012445 Lepisosteus oculatus ENSLOCG00000012445 I 0.613
Mnx1 Mus musculus ENSMUSG00000001566 D 0.613
ENSGMOG00000005155 Gadus morhua ENSGMOG00000005155 I 0.613
ENSGMOG00000006323 Gadus morhua ENSGMOG00000006323 I 0.613
MNX1 Myotis lucifugus ENSMLUG00000005453 I 0.613
SPU_002816 Strongylocentrotus purpuratus SPU_002816 I 0.612
MCINX003623 Melitaea cinxia MCINX003623 I 0.612
SMAR006976 Strigamia maritima SMAR006976 I 0.612
TC009461 Tribolium castaneum TC009461 I 0.612
CLEC001889 Cimex lectularius CLEC001889 I 0.612
SCUD_0001749601 Schistosoma curassoni SCUD_0001749601 I 0.612
KGM_12980 Danaus plexippus KGM_12980 I 0.612
ACEP21423 Atta cephalotes ACEP21423 I 0.612
SMRZ_0000470801 Schistosoma margrebowiei SMRZ_0000470801 I 0.612
T265_08787 Opisthorchis viverrini T265_08787 I 0.612
HHAL005315-PA Halyomorpha halys HHAL005315-PA I 0.612
DAPPUDRAFT_8513 Daphnia pulex DAPPUDRAFT_8513 I 0.612
Sakowv30006172m.g Saccoglossus kowalevskii Sakowv30006172m.g I 0.612
GB54763 Apis mellifera GB54763 I 0.612
HelroG147264 Helobdella robusta HelroG147264 I 0.612
ENSBTAG00000030876 Bos taurus ENSBTAG00000030876 I 0.609
ENSNLEG00000000242 Nomascus leucogenys ENSNLEG00000000242 I 0.609
MCINX002281 Melitaea cinxia MCINX002281 N 0.609
Ogr00343 Ophisaurus gracilis Ogr00343 N 0.607
NEMVEDRAFT_v1g101731 Nematostella vectensis NEMVEDRAFT_v1g101731 I 0.607
ENSPSIG00000004349 Pelodiscus sinensis ENSPSIG00000004349 I 0.604
ENSCSAVG00000003189 Ciona savignyi ENSCSAVG00000003189 I 0.601
LCUP015966 Lucilia cuprina LCUP015966 I 0.601
GF23802 Drosophila ananassae FBgn0100796 I 0.601
estExt_fgenesh2_pg.C_1690055 Branchiostoma floridae estExt_fgenesh2_pg.C_1690055 I 0.601
GA20934 Drosophila pseudoobscura FBgn0080923 I 0.601
exex Drosophila melanogaster FBgn0041156 D 0.601
AMIN011531 Anopheles minimus AMIN011531 I 0.601
ASTEI08463 Anopheles stephensi ASTEI08463 I 0.601
MDOA002512 Musca domestica MDOA002512 I 0.601
ENSPFOG00000016537 Poecilia formosa ENSPFOG00000016537 I 0.601
AQUA003449 Anopheles quadriannulatus AQUA003449 I 0.601
estExt_fgenesh2_kg.C_1370001 Branchiostoma floridae estExt_fgenesh2_kg.C_1370001 I 0.601
AAEL012474 Aedes aegypti AAEL012474 I 0.601
ACHR007261 Anopheles christyi ACHR007261 I 0.601
AGAP005041 Anopheles gambiae AGAP005041 I 0.601
GI13145 Drosophila mojavensis FBgn0135902 I 0.601
GJ13893 Drosophila virilis FBgn0201112 I 0.601
GG14457 Drosophila erecta FBgn0106716 I 0.601
GK20585 Drosophila willistoni FBgn0222581 I 0.601
GE21647 Drosophila yakuba FBgn0238897 I 0.601
MESCA004759 Megaselia scalaris MESCA004759 I 0.601
GD14043 Drosophila simulans FBgn0185738 I 0.601
mnx Ciona intestinalis ENSCING00000005724 I 0.601
GL18045 Drosophila persimilis FBgn0155648 I 0.601
GH14983 Drosophila grimshawi FBgn0122458 I 0.601
GM25007 Drosophila sechellia FBgn0179868 I 0.601
ENSAMXG00000019147 Astyanax mexicanus ENSAMXG00000019147 I 0.601
LotgiG79485 Lottia gigantea LotgiG79485 I 0.601
ISCW018031 Ixodes scapularis ISCW018031 I 0.600
tetur05g01910 Tetranychus urticae tetur05g01910 I 0.600
ACYPI005682 Acyrthosiphon pisum ACYPI005682 I 0.600
YQE_07368 Dendroctonus ponderosae YQE_07368 I 0.600
ENSPMAG00000001023 Petromyzon marinus ENSPMAG00000001023 I 0.599