PTRK_0000486100 (Parastrongyloides trichosuri)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 PTRK_0000486100 T235721_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
TLX3
M05233_2.00
Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN

NAATTGNNNNNNNNNNNNNCMATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX
0.822 0.684
TLX3
M05235_2.00
Homo sapiens
NAATTGNNNNNHNNNNCAATTN

NAATTGNNNNDNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX
0.822 0.684
TLX3
M05234_2.00
Homo sapiens
NAATTGNNNNNNNNNNDCAATTD

HAATTGHNNNNNNNNNNCAATTN
SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX
0.822 0.684
TLX3
M05236_2.00
Homo sapiens
HAATTRNNNNNNNNNYHATTV

BAATDRNNNNNNNNNYAATTD
SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX
0.822 0.684
TLX2
M02087_2.00
Homo sapiens
NYRDNNNNNN

NNNNNNHYRN
PBM
Weirauch et al.(2014)
pTH6482
0.778 0.684
Tlx2
M00526_2.00
Mus musculus
WTTAAWTA

TAWTTAAW
PBM
Berger et al.(2008)
Tlx2_3498
0.778 0.684
TLX2
M05020_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
TLX2_eDBD_HT-SELEX
0.778 0.684
TLX2
M10672_2.00
Homo sapiens
BNGTAAKDNB

VNHMTTACNV
Transfac
Matys et al.(2006)
V$NCX_01
0.778 0.684
TLX2
M05021_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
TLX2_eDBD_Methyl-HT-SELEX
0.778 0.684
C15
M06505_2.00
Drosophila melanogaster
TTAAWKR

YMWTTAA
B1H
Mathelier et al.(2014)
MA0170.1
0.777 0.684
C15
M06289_2.00
Drosophila melanogaster
BTTAAWKR

YMWTTAAV
B1H
Zhu et al.(2011)
C15_Cell_FBgn0004863
0.777 0.684
C15
M06290_2.00
Drosophila melanogaster
NWTAAWKR

YMWTTAWN
B1H
Zhu et al.(2011)
C15_SOLEXA_FBgn0004863
0.777 0.684
lms
M03863_2.00
Drosophila melanogaster
BTAATTRV

BYAATTAV
SELEX
Nitta et al.(2015)
CG13424_1
0.749 0.526
lms
M03864_2.00
Drosophila melanogaster
HTWATTRDWTDATTRR

YYAATHAWHYAATWAD
SELEX
Nitta et al.(2015)
lms_1
0.749 0.526
lms
M06536_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0175.1
0.749 0.526
lms
M06347_2.00
Drosophila melanogaster
NYTAATKR

YMATTARN
B1H
Zhu et al.(2011)
CG13424_Cell_FBgn0034520
0.749 0.526
lms
M06348_2.00
Drosophila melanogaster
NNHTAATDRN

NYHATTADNN
B1H
Zhu et al.(2011)
CG13424_SOLEXA_2_FBgn0034520
0.749 0.526
lms
M06349_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
CG13424_SOLEXA_FBgn0034520
0.749 0.526
NK7.1
M03847_2.00
Drosophila melanogaster
VTTAAAYGDTD

HAHCRTTTAAB
SELEX
Nitta et al.(2015)
NK7.1_1
0.746 0.544
NK7.1
M03848_2.00
Drosophila melanogaster
NSTTAATTGVY

RBCAATTAASN
SELEX
Nitta et al.(2015)
NK7.1_2
0.746 0.544
NK7.1
M06524_2.00
Drosophila melanogaster
TTAATDR

YHATTAA
B1H
Mathelier et al.(2014)
MA0196.1
0.746 0.544
NK7.1
M06323_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
NK7.1_Cell_FBgn0024321
0.746 0.544
NK7.1
M06324_2.00
Drosophila melanogaster
YTAATDR

YHATTAR
B1H
Zhu et al.(2011)
NK7.1_SOLEXA_FBgn0024321
0.746 0.544
Barhl1
M00433_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl1_2590
0.681 0.544
Barhl1
M03258_2.00
Mus musculus
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
Barhl1_1
0.681 0.544
Barhl1
M03259_2.00
Mus musculus
NNTAADNRNN

NNYNHTTANN
SELEX
Jolma et al.(2013)
Barhl1_2
0.681 0.544
Barhl1
M03260_2.00
Mus musculus
TAAWYGNYNNTAAWYG

CRWTTANNRNCRWTTA
SELEX
Jolma et al.(2013)
Barhl1_3
0.681 0.544
BARHL1
M05091_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_1
0.681 0.544
BARHL1
M05092_2.00
Homo sapiens
NTAADBGN

NCVHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_HT-SELEX_2
0.681 0.544
BARHL1
M05093_2.00
Homo sapiens
NTAADKGN

NCMHTTAN
SELEX
Yin et al.(2017)
BARHL1_eDBD_Methyl-HT-SELEX
0.681 0.544
Barhl2
M00460_2.00
Mus musculus
NTAAWNRNN

NNYNWTTAN
PBM
Berger et al.(2008)
Barhl2_3868
0.681 0.526
BARHL2
M03157_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_1
0.681 0.526
BARHL2
M03158_2.00
Homo sapiens
NNTAAWBGNN

NNCVWTTANN
SELEX
Jolma et al.(2013)
BARHL2_2
0.681 0.526
BARHL2
M03159_2.00
Homo sapiens
TAAWYGNNNNTAAWYR

YRWTTANNNNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_3
0.681 0.526
BARHL2
M03160_2.00
Homo sapiens
NNTAAWYGNH

DNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_4
0.681 0.526
BARHL2
M03161_2.00
Homo sapiens
NNTAAWYGNN

NNCRWTTANN
SELEX
Jolma et al.(2013)
BARHL2_5
0.681 0.526
BARHL2
M03162_2.00
Homo sapiens
TAAWYGNYNHTAAWYG

CRWTTADNRNCRWTTA
SELEX
Jolma et al.(2013)
BARHL2_6
0.681 0.526
BARHL2
M05164_2.00
Homo sapiens
HTAAAYGNY

RNCRTTTAD
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_1
0.681 0.526
BARHL2
M05165_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_HT-SELEX_2
0.681 0.526
BARHL2
M05167_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_1
0.681 0.526
BARHL2
M05168_2.00
Homo sapiens
NTAAWYGN

NCRWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_HT-SELEX_2
0.681 0.526
BARHL2
M05166_2.00
Homo sapiens
NTAAWTGNB

VNCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_eDBD_Methyl-HT-SELEX
0.681 0.526
BARHL2
M05169_2.00
Homo sapiens
NTAAWTGN

NCAWTTAN
SELEX
Yin et al.(2017)
BARHL2_FL_Methyl-HT-SELEX
0.681 0.526
B-H1
M03829_2.00
Drosophila melanogaster
VNTAAWYGNN

NNCRWTTANB
SELEX
Nitta et al.(2015)
B-H1_1
0.680 0.561
B-H1
M03830_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H1_2
0.680 0.561
B-H1
M06512_2.00
Drosophila melanogaster
HTAAWYG

CRWTTAD
B1H
Mathelier et al.(2014)
MA0168.1
0.680 0.561
ENSTNIG00000006040
M02106_2.00
Tetraodon nigroviridis
NNNBTAAWHRBNN

NNVYDWTTAVNNN
PBM
Weirauch et al.(2014)
pTH6503
0.680 0.544
B-H2
M03810_2.00
Drosophila melanogaster
VNTAAAYGNH

DNCRTTTANB
SELEX
Nitta et al.(2015)
B-H2_1
0.680 0.544
B-H2
M03811_2.00
Drosophila melanogaster
SNTAADBGN

NCVHTTANS
SELEX
Nitta et al.(2015)
B-H2_2
0.680 0.544
B-H2
M06503_2.00
Drosophila melanogaster
WTAATTG

CAATTAW
B1H
Mathelier et al.(2014)
MA0169.1
0.680 0.544
ems
M02114_2.00
Drosophila melanogaster
NTAATKRNB

VNYMATTAN
PBM
Weirauch et al.(2014)
pTH5673
0.678 0.526
ems
M03789_2.00
Drosophila melanogaster
BTAATTAN

NTAATTAV
SELEX
Nitta et al.(2015)
ems_1
0.678 0.526
ems
M03790_2.00
Drosophila melanogaster
BTAATTAVBVBTAATKRN

NYMATTAVBVBTAATTAV
SELEX
Nitta et al.(2015)
ems_2
0.678 0.526
ems
M03791_2.00
Drosophila melanogaster
BTAATKRN

NYMATTAV
SELEX
Nitta et al.(2015)
ems_3
0.678 0.526
ems
M03792_2.00
Drosophila melanogaster
STAATKRSSSSTAATKRV

BYMATTASSSSYMATTAS
SELEX
Nitta et al.(2015)
ems_4
0.678 0.526
ems
M06484_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Mathelier et al.(2014)
MA0219.1
0.678 0.526
ems
M06233_2.00
Drosophila melanogaster
WHTAATKR

YMATTADW
B1H
Zhu et al.(2011)
Ems_Cell_FBgn0000576
0.678 0.526
ems
M06234_2.00
Drosophila melanogaster
TSTMATHM

KDATKASA
B1H
Zhu et al.(2011)
ems_FlyReg_FBgn0000576
0.678 0.526
ems
M06235_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Zhu et al.(2011)
Ems_SOLEXA_FBgn0000576
0.678 0.526
ems
M09676_2.00
Drosophila melanogaster
WTWATGA

TCATWAW
Misc
Kulakovskiy et al.(2009)
ems
0.678 0.526
EMX1
M02088_2.00
Homo sapiens
NNTAATKANN

NNTMATTANN
PBM
Weirauch et al.(2014)
pTH5677
0.676 0.509
EMX1
M03151_2.00
Homo sapiens
NBTAATTRNN

NNYAATTAVN
SELEX
Jolma et al.(2013)
EMX1_1
0.676 0.509
EMX1
M03152_2.00
Homo sapiens
YMATTARYTAATKR

YMATTARYTAATKR
SELEX
Jolma et al.(2013)
EMX1_2
0.676 0.509
EMX1
M05145_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_HT-SELEX
0.676 0.509
EMX1
M05147_2.00
Homo sapiens
BTAATTAV

BTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_HT-SELEX
0.676 0.509
EMX1
M05146_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
EMX1_eDBD_Methyl-HT-SELEX
0.676 0.509
EMX1
M05148_2.00
Homo sapiens
BTAATTAN

NTAATTAV
SELEX
Yin et al.(2017)
EMX1_FL_Methyl-HT-SELEX
0.676 0.509
Emx2
M00495_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Emx2_3420
0.676 0.491
EMX2
M03210_2.00
Homo sapiens
NBTAATTANN

NNTAATTAVN
SELEX
Jolma et al.(2013)
EMX2_1
0.676 0.491
EMX2
M03211_2.00
Homo sapiens
YMATTARBTAATKR

YMATTAVYTAATKR
SELEX
Jolma et al.(2013)
EMX2_2
0.676 0.491
E5
M03814_2.00
Drosophila melanogaster
STAATKNN

NNMATTAS
SELEX
Nitta et al.(2015)
E5_1
0.676 0.491
EMX2
M05281_2.00
Homo sapiens
YTAATKAB

VTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_HT-SELEX
0.676 0.491
E5
M06507_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0189.1
0.676 0.491
E5
M06293_2.00
Drosophila melanogaster
NBTAATKA

TMATTAVN
B1H
Zhu et al.(2011)
E5_Cell_FBgn0008646
0.676 0.491
E5
M06294_2.00
Drosophila melanogaster
NTAATDR

YHATTAN
B1H
Zhu et al.(2011)
E5_SOLEXA_FBgn0008646
0.676 0.491
EMX2
M05282_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Yin et al.(2017)
EMX2_eDBD_Methyl-HT-SELEX
0.676 0.491
Hmx2
M00507_2.00
Mus musculus
NHRANYGNNN

NNNCRNTYDN
PBM
Berger et al.(2008)
Hmx2_3424
0.675 0.544
HMX2
M03234_2.00
Homo sapiens
NNTTAAKTGNN

NNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX2_1
0.675 0.544
HMX2
M05373_2.00
Homo sapiens
GNHRAKYGS

SCRMTYDNC
SELEX
Yin et al.(2017)
HMX2_eDBD_HT-SELEX
0.675 0.544
HMX2
M05375_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_HT-SELEX
0.675 0.544
HMX2
M05374_2.00
Homo sapiens
NNTAAKTGN

NCAMTTANN
SELEX
Yin et al.(2017)
HMX2_eDBD_Methyl-HT-SELEX
0.675 0.544
HMX2
M05376_2.00
Homo sapiens
NTTAAKTGNN

NNCAMTTAAN
SELEX
Yin et al.(2017)
HMX2_FL_Methyl-HT-SELEX
0.675 0.544
VAX2
M00284_2.00
Homo sapiens
NNTAATND

HNATTANN
PBM
Barrera et al.(2016)
VAX2_REF
0.668 0.526
Vax1
M00398_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Vax1_3499
0.668 0.526
Vax2
M00464_2.00
Mus musculus
NTAATDDNN

NNHHATTAN
PBM
Berger et al.(2008)
Vax2_3500
0.668 0.526
VAX2
M03119_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX2_1
0.668 0.526
VAX2
M05030_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_HT-SELEX
0.668 0.526
Vax1
M10764_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$VAX1_04
0.668 0.526
VAX2
M05031_2.00
Homo sapiens
BTAATTRV

BYAATTAV
SELEX
Yin et al.(2017)
VAX2_FL_Methyl-HT-SELEX
0.668 0.526
CG11085
M03857_2.00
Drosophila melanogaster
BTAAWYGN

NCRWTTAV
SELEX
Nitta et al.(2015)
CG11085_1
0.665 0.596
CG11085
M03858_2.00
Drosophila melanogaster
NTAAWCGN

NCGWTTAN
SELEX
Nitta et al.(2015)
CG11085_2
0.665 0.596
CG11085
M06532_2.00
Drosophila melanogaster
TTAATDG

CHATTAA
B1H
Mathelier et al.(2014)
MA0171.1
0.665 0.596
CG11085
M06339_2.00
Drosophila melanogaster
NTTAATDGV

BCHATTAAN
B1H
Zhu et al.(2011)
CG11085_Cell_FBgn0030408
0.665 0.596
CG11085
M06340_2.00
Drosophila melanogaster
NHTAAWBRNN

NNYVWTTADN
B1H
Zhu et al.(2011)
CG11085_SOLEXA_FBgn0030408
0.665 0.596
VAX2
M00283_2.00
Homo sapiens
NNTAAWNDNN

NNHNWTTANN
PBM
Barrera et al.(2016)
VAX2_L139M
0.661 0.509
MEOX2
M03103_2.00
Homo sapiens
NNTRATKASN

NSTMATYANN
SELEX
Jolma et al.(2013)
MEOX2_1
0.660 0.509
MEOX2
M03104_2.00
Homo sapiens
NTAATTANVNTAATTAV

BTAATTANBNTAATTAN
SELEX
Jolma et al.(2013)
MEOX2_2
0.660 0.509
MEOX2
M03105_2.00
Homo sapiens
HTAATGATGATKAN

NTMATCATCATTAD
SELEX
Jolma et al.(2013)
MEOX2_3
0.660 0.509
Meox2
M03271_2.00
Mus musculus
NTAATKAN

NTMATTAN
SELEX
Jolma et al.(2013)
Meox2_1
0.660 0.509
MEOX2
M04988_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_1
0.660 0.509
MEOX2
M04989_2.00
Homo sapiens
NTVATBRV

BYVATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_HT-SELEX_2
0.660 0.509
Meox2
M10771_2.00
Rattus norvegicus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MEOX2_05
0.660 0.509
MEOX2
M04990_2.00
Homo sapiens
NTAAYGHB

VDCRTTAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_1
0.660 0.509
MEOX2
M04991_2.00
Homo sapiens
NTVATKRN

NYMATBAN
SELEX
Yin et al.(2017)
MEOX2_FL_Methyl-HT-SELEX_2
0.660 0.509
Hmx1
M00524_2.00
Mus musculus
NHDAKYRNNN

NNNYRMTHDN
PBM
Berger et al.(2008)
Hmx1_3423
0.657 0.526
HMX1
M03243_2.00
Homo sapiens
NNTTAAKTGNY

RNCAMTTAANN
SELEX
Jolma et al.(2013)
HMX1_1
0.657 0.526
HMX3
M03233_2.00
Homo sapiens
NNNTAAKTGNN

NNCAMTTANNN
SELEX
Jolma et al.(2013)
HMX3_1
0.657 0.526
Hmx
M03882_2.00
Drosophila melanogaster
NYRAKYGN

NCRMTYRN
SELEX
Nitta et al.(2015)
Hmx_1
0.657 0.526
HMX1
M05392_2.00
Homo sapiens
BNYAAKTGN

NCAMTTRNV
SELEX
Yin et al.(2017)
HMX1_eDBD_HT-SELEX
0.657 0.526
Hmx
M06554_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Mathelier et al.(2014)
MA0192.1
0.657 0.526
Hmx
M06386_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_Cell_FBgn0085448
0.657 0.526
Hmx
M06387_2.00
Drosophila melanogaster
TTAATTG

CAATTAA
B1H
Zhu et al.(2011)
Hmx_SOLEXA_FBgn0085448
0.657 0.526
HMX3
M10754_2.00
Homo sapiens
CAAGTGCGTG

CACGCACTTG
Transfac
Matys et al.(2006)
V$HMX1_01
0.657 0.526
HMX1
M05393_2.00
Homo sapiens
VNYAAKTGB

VCAMTTRNB
SELEX
Yin et al.(2017)
HMX1_eDBD_Methyl-HT-SELEX
0.657 0.526
Q24780_9CNID
M02205_2.00
Eleutheria dichotoma
NNYTAATTAMN

NKTAATTARNN
PBM
Weirauch et al.(2014)
pTH6308
0.654 0.474
Hmx3_CONSTRUCT
M00537_2.00
PBM CONSTRUCTS
NHDADYRNN

NNYRHTHDN
PBM
Berger et al.(2008)
Hmx3_3490
0.644 0.509
ceh-5
M02179_2.00
Caenorhabditis elegans
NNTAATDDN

NHHATTANN
PBM
Weirauch et al.(2014)
pTH6562
0.642 0.526
slou
M00557_2.00
Drosophila melanogaster
NNTAATDRN

NYHATTANN
PBM
Busser et al.(2012a)
Slou
0.637 0.526
slou
M03798_2.00
Drosophila melanogaster
VBTAATTRSB

VSYAATTAVB
SELEX
Nitta et al.(2015)
slou_1
0.637 0.526
slou
M06494_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Mathelier et al.(2014)
MA0245.1
0.637 0.526
slou
M06262_2.00
Drosophila melanogaster
BYTAATKR

YMATTARV
B1H
Zhu et al.(2011)
Slou_Cell_FBgn0002941
0.637 0.526
slou
M06263_2.00
Drosophila melanogaster
HTAATKR

YMATTAD
B1H
Zhu et al.(2011)
Slou_SOLEXA_FBgn0002941
0.637 0.526
Nkx1-1
M00442_2.00
Mus musculus
NNTAATNDNN

NNHNATTANN
PBM
Berger et al.(2008)
Nkx1-1_3856
0.637 0.509
Nkx1-2
M00503_2.00
Mus musculus
NNTAAWNDN

NHNWTTANN
PBM
Berger et al.(2008)
Nkx1-2_3214
0.637 0.509
Dfd
M03784_2.00
Drosophila melanogaster
VNTAAYKRBN

NVYMRTTANB
SELEX
Nitta et al.(2015)
Dfd_1
0.635 0.474
Dfd
M03785_2.00
Drosophila melanogaster
VYTAATKAYN

NRTMATTARB
SELEX
Nitta et al.(2015)
Dfd_2
0.635 0.474
Dfd
M06481_2.00
Drosophila melanogaster
YTAATGA

TCATTAR
B1H
Mathelier et al.(2014)
MA0186.1
0.635 0.474
Dfd
M06226_2.00
Drosophila melanogaster
VYTAATGA

TCATTAAB
B1H
Zhu et al.(2011)
Dfd_Cell_FBgn0000439
0.635 0.474
Dfd
M06227_2.00
Drosophila melanogaster
TTAATKRY

RYMATTAA
B1H
Zhu et al.(2011)
Dfd_FlyReg_FBgn0000439
0.635 0.474
Dfd
M06228_2.00
Drosophila melanogaster
NBTAATKR

YMATTAVN
B1H
Zhu et al.(2011)
Dfd_SOLEXA_FBgn0000439
0.635 0.474
Dfd
M09675_2.00
Drosophila melanogaster
TTAATKRB

VYMATTAA
Misc
Kulakovskiy et al.(2009)
Dfd
0.635 0.474
Dfd
M10784_2.00
Drosophila melanogaster
NNNNRKTAATNNNNNN

NNNNNNATTAMYNNNN
Transfac
Matys et al.(2006)
I$DFD_01
0.635 0.474
ventx1.1.L
M02234_2.00
Xenopus laevis
NNNNVBNNNN

NNNNVBNNNN
PBM
Weirauch et al.(2014)
pTH6162
0.631 0.561
ventx1.2.S
M10805_2.00
Xenopus laevis
RSRMAAATWBBVS

SBBBWATTTKYSY
Transfac
Matys et al.(2006)
V$XVENT1_01
0.631 0.561
vab-7
M02186_2.00
Caenorhabditis elegans
KTAATTAK

MTAATTAM
PBM
Weirauch et al.(2014)
pTH6104
0.626 0.439
NEMVEDRAFT_v1g164989
M02148_2.00
Nematostella vectensis
YTAATTAG

CTAATTAR
PBM
Weirauch et al.(2014)
pTH5994
0.617 0.509
Meox1
M00384_2.00
Mus musculus
NTRATKRNN

NNYMATYAN
PBM
Berger et al.(2008)
Meox1_2310
0.615 0.509
MEOX1
M03077_2.00
Homo sapiens
NNTAATTASN

NSTAATTANN
SELEX
Jolma et al.(2013)
MEOX1_1
0.615 0.509
MEOX1
M04901_2.00
Homo sapiens
NTDAYGHB

VDCRTHAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_1
0.615 0.509
MEOX1
M04902_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
MEOX1_FL_HT-SELEX_2
0.615 0.509
MEOX1
M04903_2.00
Homo sapiens
NTAAYGWB

VWCRTTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_1
0.615 0.509
MEOX1
M04904_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
MEOX1_FL_Methyl-HT-SELEX_2
0.615 0.509
CBG20882
M01244_2.00
Caenorhabditis briggsae
NDHDATDRN

NYHATHDHN
PBM
Lambert et al.(2019)
pTH11477
0.614 0.649
Evx2
M00393_2.00
Mus musculus
NNTAAYNN

NNRTTANN
PBM
Berger et al.(2008)
Evx2_2645
0.614 0.439
Evx1
M00395_2.00
Mus musculus
NTAATBDNN

NNHVATTAN
PBM
Berger et al.(2008)
Evx1_3952
0.614 0.439
EVX1
M03102_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX1_1
0.614 0.439
EVX2
M03215_2.00
Homo sapiens
NNTAATBRBN

NVYVATTANN
SELEX
Jolma et al.(2013)
EVX2_1
0.614 0.439
EVX1
M04985_2.00
Homo sapiens
VTAATKAB

VTMATTAB
SELEX
Yin et al.(2017)
EVX1_eDBD_HT-SELEX
0.614 0.439
EVX2
M05295_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_HT-SELEX
0.614 0.439
EVX2
M09158_2.00
Homo sapiens
NBTTTATKRCHNN

NNDGYMATAAAVN
Misc
Kulakovskiy et al.(2013)
EVX2_HUMAN.H11MO.0.A
0.614 0.439
Evx1
M09174_2.00
Mus musculus
WGATTTATDRBHN

NDVYHATAAATCW
Misc
Kulakovskiy et al.(2013)
EVX1_MOUSE.H11MO.0.C
0.614 0.439
Evx2
M09173_2.00
Mus musculus
BTTTATKRCHBN

NVDGYMATAAAV
Misc
Kulakovskiy et al.(2013)
EVX2_MOUSE.H11MO.0.A
0.614 0.439
EVX2
M10736_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EVX2_04
0.614 0.439
EVX1
M04986_2.00
Homo sapiens
NTMATKAN

NTMATKAN
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_1
0.614 0.439
EVX1
M04987_2.00
Homo sapiens
HTWAYGAB

VTCRTWAD
SELEX
Yin et al.(2017)
EVX1_eDBD_Methyl-HT-SELEX_2
0.614 0.439
EVX2
M05296_2.00
Homo sapiens
NTAATKAN

NTMATTAN
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_1
0.614 0.439
EVX2
M05297_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
EVX2_eDBD_Methyl-HT-SELEX_2
0.614 0.439
lbl
M00561_2.00
Drosophila melanogaster
NTAAYDRGN

NCYHRTTAN
PBM
Busser et al.(2012a)
Lbl
0.609 0.509
lbe
M03822_2.00
Drosophila melanogaster
TAACRABV

BVTYGTTA
SELEX
Nitta et al.(2015)
lbe_1
0.609 0.509
lbe
M03823_2.00
Drosophila melanogaster
BTVAKBRV

BYVMTBAV
SELEX
Nitta et al.(2015)
lbe_2
0.609 0.509
lbe
M03824_2.00
Drosophila melanogaster
NTAATTRN

NYAATTAN
SELEX
Nitta et al.(2015)
lbe_3
0.609 0.509
lbe
M03825_2.00
Drosophila melanogaster
TAAYRAKN

NMTYRTTA
SELEX
Nitta et al.(2015)
lbe_4
0.609 0.509
lbl
M03815_2.00
Drosophila melanogaster
NTAAYKRG

CYMRTTAN
SELEX
Nitta et al.(2015)
lbl_1
0.609 0.509
lbl
M03816_2.00
Drosophila melanogaster
NTAAYRAGN

NCTYRTTAN
SELEX
Nitta et al.(2015)
lbl_2
0.609 0.509
lbl
M06508_2.00
Drosophila melanogaster
TAATKR

YMATTA
B1H
Mathelier et al.(2014)
MA0232.1
0.609 0.509
lbe
M06510_2.00
Drosophila melanogaster
TAAYNA

TNRTTA
B1H
Mathelier et al.(2014)
MA0231.1
0.609 0.509
lbe
M06299_2.00
Drosophila melanogaster
NHTAAYNA

TNRTTADN
B1H
Zhu et al.(2011)
Lbe_Cell_FBgn0011278
0.609 0.509
lbe
M06300_2.00
Drosophila melanogaster
YTAAYBA

TVRTTAR
B1H
Zhu et al.(2011)
Lbe_SOLEXA_FBgn0011278
0.609 0.509
lbl
M06295_2.00
Drosophila melanogaster
VHTAATKR

YMATTADB
B1H
Zhu et al.(2011)
Lbl_Cell_FBgn0008651
0.609 0.509
lbl
M06296_2.00
Drosophila melanogaster
NHTAAYBA

TVRTTADN
B1H
Zhu et al.(2011)
Lbl_SOLEXA_FBgn0008651
0.609 0.509
LBX1
M02090_2.00
Homo sapiens
NTAAYTRG

CYARTTAN
PBM
Weirauch et al.(2014)
pTH6404
0.609 0.491
Dr
M00555_2.00
Drosophila melanogaster
TAATTRNN

NNYAATTA
PBM
Busser et al.(2012a)
Msh
0.608 0.544
Dr
M06482_2.00
Drosophila melanogaster
TAATTGS

SCAATTA
B1H
Mathelier et al.(2014)
MA0188.1
0.608 0.544
Dr
M06229_2.00
Drosophila melanogaster
TAATTGSHB

VDSCAATTA
B1H
Zhu et al.(2011)
Dr_Cell_FBgn0000492
0.608 0.544
Dr
M06230_2.00
Drosophila melanogaster
TAATTR

YAATTA
B1H
Zhu et al.(2011)
Dr_SOLEXA_FBgn0000492
0.608 0.544
MSX2
M00290_2.00
Homo sapiens
WDATNDNN

NNHNATHW
PBM
Barrera et al.(2016)
MSX2_REF
0.605 0.526
Msx2
M00414_2.00
Mus musculus
HRATKRNN

NNYMATYD
PBM
Berger et al.(2008)
Msx2_3449
0.605 0.526
MSX2
M03127_2.00
Homo sapiens
TAATTRBHWKWTAATTGV

BCAATTAWMWDVYAATTA
SELEX
Jolma et al.(2013)
MSX2_1
0.605 0.526
MSX2
M03128_2.00
Homo sapiens
NTAATTGB

VCAATTAN
SELEX
Jolma et al.(2013)
MSX2_2
0.605 0.526
MSX2
M05060_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_HT-SELEX
0.605 0.526
MSX2
M10677_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q3
0.605 0.526
MSX2
M10678_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX2_Q6
0.605 0.526
MSX2
M00288_2.00
Homo sapiens
NTAATNDN

NHNATTAN
PBM
Barrera et al.(2016)
MSX2_P148H
0.605 0.526
MSX2
M05061_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_1
0.605 0.526
MSX2
M05062_2.00
Homo sapiens
NTAAYGAB

VTCRTTAN
SELEX
Yin et al.(2017)
MSX2_eDBD_Methyl-HT-SELEX_2
0.605 0.526
Msx3
M00429_2.00
Mus musculus
TAATKDNN

NNHMATTA
PBM
Berger et al.(2008)
Msx3_3206
0.603 0.509
Msx1
M00501_2.00
Mus musculus
NHDATND

HNATHDN
PBM
Berger et al.(2008)
Msx1_3031
0.603 0.509
MSX1
M03184_2.00
Homo sapiens
TAATTRBHHNHTAATTRN

NYAATTADNDDVYAATTA
SELEX
Jolma et al.(2013)
MSX1_1
0.603 0.509
MSX1
M03185_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_2
0.603 0.509
MSX1
M03186_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
MSX1_3
0.603 0.509
Msx3
M03255_2.00
Mus musculus
TAATTGSHHNNTAATTRN

NYAATTANNDDSCAATTA
SELEX
Jolma et al.(2013)
Msx3_1
0.603 0.509
Msx3
M03256_2.00
Mus musculus
NTAATTRN

NYAATTAN
SELEX
Jolma et al.(2013)
Msx3_2
0.603 0.509
MSX1
M05221_2.00
Homo sapiens
NTAATTRV

BYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_HT-SELEX
0.603 0.509
MSX1
M05224_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_HT-SELEX
0.603 0.509
MSX1
M10715_2.00
Homo sapiens
HNBTWWNTG

CANWWAVND
Transfac
Matys et al.(2006)
V$MSX1_01
0.603 0.509
MSX1
M10716_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5_01
0.603 0.509
MSX1
M10717_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MSX1_Q5
0.603 0.509
MSX1
M05222_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_1
0.603 0.509
MSX1
M05223_2.00
Homo sapiens
NTWAYGMB

VKCRTWAN
SELEX
Yin et al.(2017)
MSX1_eDBD_Methyl-HT-SELEX_2
0.603 0.509
MSX1
M05225_2.00
Homo sapiens
NTAATTRN

NYAATTAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_1
0.603 0.509
MSX1
M05226_2.00
Homo sapiens
NTWAYGWB

VWCRTWAN
SELEX
Yin et al.(2017)
MSX1_FL_Methyl-HT-SELEX_2
0.603 0.509
Hoxc5
M00422_2.00
Mus musculus
NWRATND

HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.603 0.456
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.603 0.456
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.603 0.456
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA

TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.603 0.456
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.603 0.456
Pdx1
M00446_2.00
Mus musculus
NWRAYNNN

NNNRTYWN
PBM
Berger et al.(2008)
Ipf1_3815
0.601 0.456
SPU_026099
M02175_2.00
Strongylocentrotus purpuratus
KTAATTRB

VYAATTAM
PBM
Weirauch et al.(2014)
pTH6140
0.601 0.456
PDX1
M03155_2.00
Homo sapiens
NTAATTRNNNYTAATTRN

NYAATTARNNNYAATTAN
SELEX
Jolma et al.(2013)
PDX1_1
0.601 0.456
PDX1
M03156_2.00
Homo sapiens
BTAATKRN

NYMATTAV
SELEX
Jolma et al.(2013)
PDX1_2
0.601 0.456
PDX1
M05161_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_HT-SELEX
0.601 0.456
PDX1
M09147_2.00
Homo sapiens
TGATWGATK

MATCWATCA
Misc
Kulakovskiy et al.(2013)
PDX1_HUMAN.H11MO.0.A
0.601 0.456
Pdx1
M09192_2.00
Mus musculus
VYTAATGRB

VYCATTARB
Misc
Kulakovskiy et al.(2013)
PDX1_MOUSE.H11MO.0.B
0.601 0.456
Pdx1
M09571_2.00
Mus musculus
TGATTRATKR

YMATYAATCA
Misc
Heinz et al.(2010)
Islet-Pdx1_SRA008281
0.601 0.456
PDX1
M10699_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_01
0.601 0.456
PDX1
M10700_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_02
0.601 0.456
PDX1
M10701_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_03
0.601 0.456
PDX1
M10702_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_04
0.601 0.456
PDX1
M10703_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_05
0.601 0.456
PDX1
M10704_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4_01
0.601 0.456
PDX1
M10705_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q4
0.601 0.456
PDX1
M10706_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5_01
0.601 0.456
PDX1
M10707_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q5
0.601 0.456
PDX1
M10708_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$IPF1_Q6
0.601 0.456
PDX1
M05162_2.00
Homo sapiens
HTAAYGAB

VTCRTTAD
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_1
0.601 0.456
PDX1
M05163_2.00
Homo sapiens
YTAATKRB

VYMATTAR
SELEX
Yin et al.(2017)
PDX1_eDBD_Methyl-HT-SELEX_2
0.601 0.456
Nkx6-3
M00522_2.00
Mus musculus
NDYDATNRN

NYNATHRHN
PBM
Berger et al.(2008)
Nkx6-3_3446
0.601 0.596
HGTX
M03869_2.00
Drosophila melanogaster
DTAATKRN

NYMATTAH
SELEX
Nitta et al.(2015)
HGTX_1
0.601 0.596
HGTX
M03870_2.00
Drosophila melanogaster
DTAATKRN

NYMATTAH
SELEX
Nitta et al.(2015)
HGTX_2
0.601 0.596
NKX6-3
M05242_2.00
Homo sapiens
NWTAATGRB

VYCATTAWN
SELEX
Yin et al.(2017)
NKX6-3_eDBD_HT-SELEX
0.601 0.596
HGTX
M06542_2.00
Drosophila melanogaster
DTAATKA

TMATTAH
B1H
Mathelier et al.(2014)
MA0191.1
0.601 0.596
HGTX
M06360_2.00
Drosophila melanogaster
DDTAATKA

TMATTAHH
B1H
Zhu et al.(2011)
Hgtx_Cell_FBgn0040318
0.601 0.596
HGTX
M06361_2.00
Drosophila melanogaster
NWTAATKA

TMATTAWN
B1H
Zhu et al.(2011)
Hgtx_SOLEXA_FBgn0040318
0.601 0.596
NKX6-3
M05243_2.00
Homo sapiens
DWTAATGRB

VYCATTAWH
SELEX
Yin et al.(2017)
NKX6-3_eDBD_Methyl-HT-SELEX
0.601 0.596
Nkx6-1
M00466_2.00
Mus musculus
NDTDATNRN

NYNATHAHN
PBM
Berger et al.(2008)
Nkx6-1_2825
0.601 0.579
NKX6-2
M05184_2.00
Homo sapiens
DTAATTRN

NYAATTAH
SELEX
Yin et al.(2017)
NKX6-2_eDBD_HT-SELEX
0.601 0.579
NKX6-2
M05186_2.00
Homo sapiens
WTAATKAB

VTMATTAW
SELEX
Yin et al.(2017)
NKX6-2_FL_HT-SELEX
0.601 0.579
NKX6-1
M09151_2.00
Homo sapiens
RAHWRATKDSNWWWTRATD

HATYAWWWNSHMATYWDTY
Misc
Kulakovskiy et al.(2013)
NKX61_HUMAN.H11MO.0.B
0.601 0.579
Nkx6-1
M09200_2.00
Mus musculus
HNWRATKDNHWWWTRATDR

YHATYAWWWDNHMATYWND
Misc
Kulakovskiy et al.(2013)
NKX61_MOUSE.H11MO.0.A
0.601 0.579
Nkx6-1
M09573_2.00
Mus musculus
NDTAATKR

YMATTAHN
Misc
Heinz et al.(2010)
Islet-Nkx6.1_GSE40975
0.601 0.579
NKX6-1
M10718_2.00
Homo sapiens
HWTTTAATKGRWT

AWYCMATTAAAWD
Transfac
Matys et al.(2006)
V$NKX61_01
0.601 0.579
NKX6-1
M10719_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX61_08
0.601 0.579
NKX6-2
M10711_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NKX62_Q2
0.601 0.579
NKX6-2
M05185_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
NKX6-2_eDBD_Methyl-HT-SELEX
0.601 0.579
NKX6-2
M05187_2.00
Homo sapiens
WTAATKAB

VTMATTAW
SELEX
Yin et al.(2017)
NKX6-2_FL_Methyl-HT-SELEX
0.601 0.579
btn
M03832_2.00
Drosophila melanogaster
NNTAATKANB

VNTMATTANN
SELEX
Nitta et al.(2015)
btn_1
0.599 0.456
btn
M03833_2.00
Drosophila melanogaster
VNTAATKABN

NVTMATTANB
SELEX
Nitta et al.(2015)
btn_2
0.599 0.456
btn
M06515_2.00
Drosophila melanogaster
DTAATKA

TMATTAH
B1H
Mathelier et al.(2014)
MA0215.1
0.599 0.456
btn
M06307_2.00
Drosophila melanogaster
NDTAATKA

TMATTAHN
B1H
Zhu et al.(2011)
Btn_Cell_FBgn0014949
0.599 0.456
btn
M06308_2.00
Drosophila melanogaster
HTAATKA

TMATTAD
B1H
Zhu et al.(2011)
Btn_SOLEXA_FBgn0014949
0.599 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PTRK_0000486100.1 Homeodomain 55 111

Links

Other Homeodomain family TFs
Other Parastrongyloides trichosuri TFs

Invalid Input OrderBy

3091 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action