CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PXEA_0000230101
(
Protopolystoma xenopodis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
IPR001356
PXEA_0000230101
T235759_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ARGFX
M05369_2.00
Homo sapiens
NYTAATTARH
DYTAATTARN
SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_1
0.617
0.316
ARGFX
M05370_2.00
Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD
SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_2
0.617
0.316
ARGFX
M05371_2.00
Homo sapiens
NYTAATTAGH
DCTAATTARN
SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_1
0.617
0.316
ARGFX
M05372_2.00
Homo sapiens
HTAATYTAATTAR
YTAATTARATTAD
SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_2
0.617
0.316
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PXEA_0000230101-mRNA-1
Homeodomain
444
500
KRGRTRLTETQLGVLRSYFDINNSPGEEKLAEICSRTQLQEKVVKHWFRNTLFKERQ
Links
Other
Homeodomain
family TFs
Other
Protopolystoma xenopodis
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SMTD_0002261301
Schistosoma mattheei
SMTD_0002261301
I
0.826
Smp_171380
Schistosoma mansoni
Smp_171380
I
0.826
SROB_0002221601
Schistosoma rodhaini
SROB_0002221601
I
0.826
TRE_0001559401
Trichobilharzia regenti
TRE_0001559401
I
0.826
EFV48379
Trichinella spiralis
EFV48379
N
0.799
HelroG138586
Helobdella robusta
HelroG138586
N
0.797
D915_02122
Fasciola hepatica
D915_02122
N
0.783
EEL_0000436201
Elaeophora elaphi
EEL_0000436201
I
0.783
CGOC_0000645001
Cylicostephanus goldi
CGOC_0000645001
I
0.781
TELCIR_21719
Teladorsagia circumcincta
TELCIR_21719
I
0.781
MhA1_Contig726.frz3.gene2
Meloidogyne hapla
MhA1_Contig726.frz3.gene2
I
0.690
ARGFX
Oryctolagus cuniculus
ENSOCUG00000008795
I
0.681
ENSCPOG00000006393
Cavia porcellus
ENSCPOG00000006393
I
0.625
ARGFX
Pan troglodytes
ENSPTRG00000015277
I
0.617
ENSPPYG00000013497
Pongo abelii
ENSPPYG00000013497
I
0.617
ARGFX
Gorilla gorilla
ENSGGOG00000005362
I
0.617
ENSNLEG00000013255
Nomascus leucogenys
ENSNLEG00000013255
I
0.617
ARGFX
Homo sapiens
ENSG00000186103
D
0.617
ENSLAFG00000028670
Loxodonta africana
ENSLAFG00000028670
I
0.609
ARGFX
Macaca mulatta
ENSMMUG00000016395
I
0.605
ARGFX
Bos taurus
ENSBTAG00000002273
I
0.605
ARGFX
Callithrix jacchus
ENSCJAG00000008507
I
0.605
ENSOARG00000020026
Ovis aries
ENSOARG00000020026
I
0.605
ARGFX
Tupaia belangeri
ENSTBEG00000015401
I
0.605
ENSSSCG00000011886
Sus scrofa
ENSSSCG00000011886
I
0.605
ENSPANG00000009686
Papio anubis
ENSPANG00000009686
I
0.605
ARGFX
Otolemur garnettii
ENSOGAG00000002406
I
0.605
ENSP00000335578-D1
Bos grunniens
ENSP00000335578-D1
I
0.605
ENSMMUP00000021529
Macaca fascicularis
ENSMMUP00000021529
I
0.605
ENSPPYG00000008158
Pongo abelii
ENSPPYG00000008158
I
0.605