SMRZ_0001964901 (Schistosoma margrebowiei)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SMRZ_0001964901 T236107_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
abd-A
M03770_2.00
Drosophila melanogaster
NNTAATKRCN

NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_1
0.849 0.895
abd-A
M03771_2.00
Drosophila melanogaster
NNTAATKRCN

NGYMATTANN
SELEX
Nitta et al.(2015)
abd-A_2
0.849 0.895
abd-A
M06475_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0206.1
0.849 0.895
abd-A
M06210_2.00
Drosophila melanogaster
WTWATKDM

KHMATWAW
B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014
0.849 0.895
abd-A
M09671_2.00
Drosophila melanogaster
HTAATKRH

DYMATTAD
Misc
Kulakovskiy et al.(2009)
abd-A
0.849 0.895
abd-A
M10778_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDA_Q6
0.849 0.895
Ubx
M00558_2.00
Drosophila melanogaster
NWWAYDDNN

NNHHRTWWN
PBM
Busser et al.(2012a)
Ubx
0.845 0.895
Ubx
M03804_2.00
Drosophila melanogaster
NTAATKRH

DYMATTAN
SELEX
Nitta et al.(2015)
Ubx_1
0.845 0.895
Ubx
M06499_2.00
Drosophila melanogaster
NTTAATKR

YMATTAAN
B1H
Mathelier et al.(2014)
MA0094.2
0.845 0.895
Ubx
M06273_2.00
Drosophila melanogaster
NTTAATKR

YMATTAAN
B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944
0.845 0.895
Ubx
M06274_2.00
Drosophila melanogaster
TAATKD

HMATTA
B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944
0.845 0.895
Ubx
M06275_2.00
Drosophila melanogaster
NTTWATKR

YMATWAAN
B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944
0.845 0.895
Ubx
M09680_2.00
Drosophila melanogaster
TTAATKR

YMATTAA
Misc
Kulakovskiy et al.(2009)
Ubx
0.845 0.895
Ubx
M10788_2.00
Drosophila melanogaster
NNVNNNNTAATKRNBHNND

HNNDVNYMATTANNNNBNN
Transfac
Matys et al.(2006)
I$UBX_01
0.845 0.895
Hoxb6
M00381_2.00
Mus musculus
NNDHNNN

NNNDHNN
PBM
Berger et al.(2008)
Hoxb6_3428
0.833 0.895
HOXB6
M04999_2.00
Homo sapiens
NTAATKRY

RYMATTAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX
0.833 0.895
HOXB6
M05000_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1
0.833 0.895
HOXB6
M05001_2.00
Homo sapiens
NTWATKRB

VYMATWAN
SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2
0.833 0.895
Hoxa6
M00494_2.00
Mus musculus
NWWATKRNN

NNYMATWWN
PBM
Berger et al.(2008)
Hoxa6_1040
0.829 0.860
HOXA6
M04974_2.00
Homo sapiens
NNTAATKRVN

NBYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX
0.829 0.860
HOXA6
M04975_2.00
Homo sapiens
NNTAATKRBN

NVYMATTANN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1
0.829 0.860
HOXA6
M04976_2.00
Homo sapiens
NTAAYGRY

RYCRTTAN
SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2
0.829 0.860
Hoxb8
M00517_2.00
Mus musculus
NWWAYNDNN

NNHNRTWWN
PBM
Berger et al.(2008)
Hoxb8_3780
0.820 0.807
HOXB8
M05048_2.00
Homo sapiens
NTAATKRM

KYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX
0.820 0.807
HOXB8
M09141_2.00
Homo sapiens
BMATHAATCAA

TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C
0.820 0.807
Hoxb8
M09214_2.00
Mus musculus
BMATHAATCAA

TTGATTDATKV
Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C
0.820 0.807
HOXB8
M05049_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1
0.820 0.807
HOXB8
M05050_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2
0.820 0.807
Hoxd8
M00436_2.00
Mus musculus
NNWWYNNN

NNNRWWNN
PBM
Berger et al.(2008)
Hoxd8_2644
0.820 0.789
HOXD8
M03221_2.00
Homo sapiens
VHWAATKWDN

NHWMATTWDB
SELEX
Jolma et al.(2013)
HOXD8_1
0.820 0.789
HOXD8
M05310_2.00
Homo sapiens
BTAATKRY

RYMATTAV
SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX
0.820 0.789
HOXD8
M05311_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1
0.820 0.789
HOXD8
M05312_2.00
Homo sapiens
NTWAYGRY

RYCRTWAN
SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2
0.820 0.789
Hoxc6
M00392_2.00
Mus musculus
TTAATTAB

VTAATTAA
PBM
Berger et al.(2008)
Hoxc6_3954
0.816 0.860
HOXB7
M00334_2.00
Homo sapiens
NBRDNNN

NNNHYVN
PBM
Barrera et al.(2016)
HOXB7_REF
0.801 0.877
Hoxb7
M00481_2.00
Mus musculus
NNWAYNDN

NHNRTWNN
PBM
Berger et al.(2008)
Hoxb7_3953
0.801 0.877
HOXB7
M05404_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX
0.801 0.877
HOXB7
M05407_2.00
Homo sapiens
BBTAATTRCN

NGYAATTAVV
SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX
0.801 0.877
HOXB7
M09166_2.00
Homo sapiens
MATHAATCAW

WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C
0.801 0.877
Hoxb7
M09206_2.00
Mus musculus
MATHAATCAW

WTGATTDATK
Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C
0.801 0.877
HOXB7
M05405_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1
0.801 0.877
HOXB7
M05406_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2
0.801 0.877
HOXB7
M05408_2.00
Homo sapiens
NNTAATKRCN

NGYMATTANN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1
0.801 0.877
HOXB7
M05409_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2
0.801 0.877
HOXB7
M00333_2.00
Homo sapiens
NHATWTATTN

NAATAWATDN
PBM
Barrera et al.(2016)
HOXB7_R189C
0.801 0.860
Hoxa7
M00476_2.00
Mus musculus
NNWAYNDNN

NNHNRTWNN
PBM
Berger et al.(2008)
Hoxa7_2668
0.797 0.860
Hoxa7
M00477_2.00
Mus musculus
NYHHYNNNN

NNNNRDDRN
PBM
Berger et al.(2008)
Hoxa7_3750
0.797 0.860
HOXA7
M05069_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX
0.797 0.860
Antp
M06549_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0166.1
0.797 0.860
Antp
M06374_2.00
Drosophila melanogaster
YTTAATKA

TMATTAAR
B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095
0.797 0.860
Antp
M06375_2.00
Drosophila melanogaster
WTAATW

AATTAW
B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095
0.797 0.860
Antp
M06376_2.00
Drosophila melanogaster
NHTAATKR

YMATTADN
B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095
0.797 0.860
Antp
M09682_2.00
Drosophila melanogaster
TYTTWATKA

TMATWAARA
Misc
Kulakovskiy et al.(2009)
Antp
0.797 0.860
Antp
M10789_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ANTP_Q6_01
0.797 0.860
HOXA7
M10679_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA7_01
0.797 0.860
HOXA7
M05070_2.00
Homo sapiens
NTAATKRN

NYMATTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1
0.797 0.860
HOXA7
M05071_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2
0.797 0.860
CBG00029
M01240_2.00
Caenorhabditis briggsae
ATTAATTA

TAATTAAT
PBM
Lambert et al.(2019)
pTH11471
0.790 0.754
Hoxc8
M00391_2.00
Mus musculus
NNDNYNNNN

NNNNRNHNN
PBM
Berger et al.(2008)
Hoxc8_3429
0.788 0.789
HOXC8
M04912_2.00
Homo sapiens
NYAATTRN

NYAATTRN
SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX
0.788 0.789
HOXC8
M10636_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXC8_Q3
0.788 0.789
HOXC8
M04913_2.00
Homo sapiens
NYMATKRN

NYMATKRN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1
0.788 0.789
HOXC8
M04914_2.00
Homo sapiens
NTWAYGRY

RYCRTWAN
SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2
0.788 0.789
ftz
M03795_2.00
Drosophila melanogaster
WTAATTRC

GYAATTAW
SELEX
Nitta et al.(2015)
ftz_1
0.787 0.754
ftz
M06488_2.00
Drosophila melanogaster
TTAATKA

TMATTAA
B1H
Mathelier et al.(2014)
MA0225.1
0.787 0.754
ftz
M06247_2.00
Drosophila melanogaster
VTTAATKA

TMATTAAB
B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077
0.787 0.754
ftz
M06248_2.00
Drosophila melanogaster
TAATKRNH

DNYMATTA
B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077
0.787 0.754
ftz
M06249_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077
0.787 0.754
ftz
M09679_2.00
Drosophila melanogaster
YTAATKRNN

NNYMATTAR
Misc
Kulakovskiy et al.(2009)
ftz
0.787 0.754
ftz
M10787_2.00
Drosophila melanogaster
CTTAATTRBHBB

VVDVYAATTAAG
Transfac
Matys et al.(2006)
I$FTZ_01
0.787 0.754
Q8I9J5_9BILA
M02214_2.00
Spadella cephaloptera
NVTAWTWABN

NVTWAWTABN
PBM
Weirauch et al.(2014)
pTH6164
0.753 0.684
HOXB7
M00331_2.00
Homo sapiens
NNNNNNY

RNNNNNN
PBM
Barrera et al.(2016)
HOXB7_K191R
0.745 0.860
HOXB7
M00332_2.00
Homo sapiens
NDWATATAYN

NRTATATWHN
PBM
Barrera et al.(2016)
HOXB7_M190L
0.725 0.860
egl-5
M09581_2.00
Caenorhabditis elegans
DWTTWATGGS

SCCATWAAWH
Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode
0.719 0.596
CBG00023
M02062_2.00
Caenorhabditis briggsae
NWWATKDNNN

NNNHMATWWN
PBM
Weirauch et al.(2014)
pTH5778
0.719 0.579
CBG23031
M01245_2.00
Caenorhabditis briggsae
NTTWATKRNN

NNYMATWAAN
PBM
Lambert et al.(2019)
pTH11458
0.649 0.491
Hoxc5
M00422_2.00
Mus musculus
NWRATND

HNATYWN
PBM
Berger et al.(2008)
Hoxc5_2630
0.649 0.789
Scr
M03799_2.00
Drosophila melanogaster
BTAATKRB

VYMATTAV
SELEX
Nitta et al.(2015)
Scr_1
0.637 0.807
Scr
M06496_2.00
Drosophila melanogaster
YTAATKA

TMATTAR
B1H
Mathelier et al.(2014)
MA0203.1
0.637 0.807
Scr
M06266_2.00
Drosophila melanogaster
HVYTAATKA

TMATTARBD
B1H
Zhu et al.(2011)
Scr_Cell_FBgn0003339
0.637 0.807
Scr
M06267_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Scr_SOLEXA_FBgn0003339
0.637 0.807
Hoxa5
M00478_2.00
Mus musculus
NTAATNDNN

NNHNATTAN
PBM
Berger et al.(2008)
Hoxa5_3415
0.637 0.789
Hoxb5
M00480_2.00
Mus musculus
NWDWTNNNN

NNNNAWHWN
PBM
Berger et al.(2008)
Hoxb5_3122
0.637 0.789
HOXB5
M03125_2.00
Homo sapiens
NNKAATKRNN

NNYMATTMNN
SELEX
Jolma et al.(2013)
HOXB5_1
0.637 0.789
HOXA5
M04968_2.00
Homo sapiens
STAATKRS

SYMATTAS
SELEX
Yin et al.(2017)
HOXA5_eDBD_HT-SELEX
0.637 0.789
HOXA5
M04971_2.00
Homo sapiens
NTMATKRB

VYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_HT-SELEX
0.637 0.789
HOXB5
M05051_2.00
Homo sapiens
NTAATKRV

BYMATTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_HT-SELEX
0.637 0.789
HOXB5
M05054_2.00
Homo sapiens
STMATKAB

VTMATKAS
SELEX
Yin et al.(2017)
HOXB5_FL_HT-SELEX
0.637 0.789
HOXA5
M10652_2.00
Homo sapiens
NGRDBKBDHNBAVTAATKRRGRDVDDDGSR

YSCHHHBHYCYYMATTABTVNDHVMVHYCN
Transfac
Matys et al.(2006)
V$HOX13_01
0.637 0.789
HOXA5
M08457_2.00
Homo sapiens
CDBWAATK

MATTWVHG
COMPILED
Mathelier et al.(2014)
MA0158.1
0.637 0.789
HOXA5
M04969_2.00
Homo sapiens
BTAATKRV

BYMATTAV
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_1
0.637 0.789
HOXA5
M04970_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_eDBD_Methyl-HT-SELEX_2
0.637 0.789
HOXA5
M04972_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_1
0.637 0.789
HOXA5
M04973_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXA5_FL_Methyl-HT-SELEX_2
0.637 0.789
HOXB5
M05052_2.00
Homo sapiens
NTMATKRN

NYMATKAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_1
0.637 0.789
HOXB5
M05053_2.00
Homo sapiens
NTAAYGAY

RTCRTTAN
SELEX
Yin et al.(2017)
HOXB5_eDBD_Methyl-HT-SELEX_2
0.637 0.789
HOXB5
M05055_2.00
Homo sapiens
NTMATKAB

VTMATKAN
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_1
0.637 0.789
HOXB5
M05056_2.00
Homo sapiens
HTAAYGAY

RTCRTTAD
SELEX
Yin et al.(2017)
HOXB5_FL_Methyl-HT-SELEX_2
0.637 0.789
Abd-B
M00554_2.00
Drosophila melanogaster
NWTWAYDDNN

NNHHRTWAWN
PBM
Busser et al.(2012a)
Abd-B
0.628 0.632
Abd-B
M03772_2.00
Drosophila melanogaster
DRTCRTAAAWH

DWTTTAYGAYH
SELEX
Nitta et al.(2015)
Abd-B_1
0.628 0.632
Abd-B
M03773_2.00
Drosophila melanogaster
DTTTTATKRCY

RGYMATAAAAH
SELEX
Nitta et al.(2015)
Abd-B_2
0.628 0.632
Abd-B
M03774_2.00
Drosophila melanogaster
NKCARYAACGACYW

WRGTCGTTRYTGMN
SELEX
Nitta et al.(2015)
Abd-B_3
0.628 0.632
Abd-B
M03775_2.00
Drosophila melanogaster
DTTTWATGKSTTTY

RAAASMCATWAAAH
SELEX
Nitta et al.(2015)
Abd-B_4
0.628 0.632
Abd-B
M06476_2.00
Drosophila melanogaster
TTTATKR

YMATAAA
B1H
Mathelier et al.(2014)
MA0165.1
0.628 0.632
Abd-B
M06211_2.00
Drosophila melanogaster
YCATAAAA

TTTTATGR
B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015
0.628 0.632
Abd-B
M09672_2.00
Drosophila melanogaster
YMATAAAAHH

DDTTTTATKR
Misc
Kulakovskiy et al.(2009)
Abd-B
0.628 0.632
Abd-B
M10779_2.00
Drosophila melanogaster
VSNTTDATKRCNNN

NNNGYMATHAANSB
Transfac
Matys et al.(2006)
I$ABDB_01
0.628 0.632
Abd-B
M10780_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$ABDB_Q6
0.628 0.632
Hoxc9
M00470_2.00
Mus musculus
NGTAATWAAN

NTTWATTACN
PBM
Berger et al.(2008)
Hoxc9_2367
0.626 0.684
Hoxd9
M03282_2.00
Mus musculus
TTTWATKKB

VMMATWAAA
SELEX
Jolma et al.(2013)
Hoxd9_1
0.626 0.684
Hoxd9
M03283_2.00
Mus musculus
DWTTWATKRY

RYMATWAAWH
SELEX
Jolma et al.(2013)
Hoxd9_2
0.626 0.684
Hoxd9
M03284_2.00
Mus musculus
DTTWAYGRB

VYCRTWAAH
SELEX
Jolma et al.(2013)
Hoxd9_3
0.626 0.684
HOXC9
M05331_2.00
Homo sapiens
GTCGTAAAAN

NTTTTACGAC
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_1
0.626 0.684
HOXC9
M05332_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_HT-SELEX_2
0.626 0.684
HOXD9
M05104_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_1
0.626 0.684
HOXD9
M05105_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_HT-SELEX_2
0.626 0.684
HOXD9
M05108_2.00
Homo sapiens
RTCGTAAAWN

NWTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_1
0.626 0.684
HOXD9
M05109_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD9_FL_HT-SELEX_2
0.626 0.684
Hoxc9
M08137_2.00
Mus musculus
NWGATTTATDGSH

DSCHATAAATCWN
ChIP-seq
Mathelier et al.(2014)
MA0485.1
0.626 0.684
HOXC9
M09161_2.00
Homo sapiens
HTTWATKGCH

DGCMATWAAD
Misc
Kulakovskiy et al.(2013)
HXC9_HUMAN.H11MO.0.C
0.626 0.684
Hoxc9
M09574_2.00
Mus musculus
TGATTTATDGCH

DGCHATAAATCA
Misc
Heinz et al.(2010)
Ainv15-Hoxc9_GSE21812
0.626 0.684
HOXD9
M10686_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD9_Q2
0.626 0.684
HOXC9
M05333_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_1
0.626 0.684
HOXC9
M05334_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXC9_FL_Methyl-HT-SELEX_2
0.626 0.684
HOXD9
M05106_2.00
Homo sapiens
NNTTWATKRC

GYMATWAANN
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_1
0.626 0.684
HOXD9
M05107_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_eDBD_Methyl-HT-SELEX_2
0.626 0.684
HOXD9
M05110_2.00
Homo sapiens
RTCGTAAANN

NNTTTACGAY
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_1
0.626 0.684
HOXD9
M05111_2.00
Homo sapiens
NDTTWATKRC

GYMATWAAHN
SELEX
Yin et al.(2017)
HOXD9_FL_Methyl-HT-SELEX_2
0.626 0.684
Hoxb9
M00410_2.00
Mus musculus
NTTWAYDDNN

NNHHRTWAAN
PBM
Berger et al.(2008)
Hoxb9_3413
0.626 0.667
Hoxa9
M00475_2.00
Mus musculus
NNDDBNNN

NNNVHHNN
PBM
Berger et al.(2008)
Hoxa9_2622
0.626 0.667
HOXA9
M03085_2.00
Homo sapiens
NNDTTWAYGAYN

NRTCRTWAAHNN
SELEX
Jolma et al.(2013)
HOXA10_1
0.626 0.667
HOXA9
M03086_2.00
Homo sapiens
NDTTWATKRYN

NRYMATWAAHN
SELEX
Jolma et al.(2013)
HOXA10_2
0.626 0.667
HOXA9
M04932_2.00
Homo sapiens
NNDWWABKRC

GYMVTWWHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_1
0.626 0.667
HOXA9
M04933_2.00
Homo sapiens
NNDTWAYGRB

VYCRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_HT-SELEX_2
0.626 0.667
HOXB9
M05289_2.00
Homo sapiens
RTCRTAAAWN

NWTTTAYGAY
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_1
0.626 0.667
HOXB9
M05290_2.00
Homo sapiens
NTTTWATKRC

GYMATWAAAN
SELEX
Yin et al.(2017)
HOXB9_eDBD_HT-SELEX_2
0.626 0.667
Hoxa9
M08138_2.00
Mus musculus
TGATTKATKRB

VYMATMAATCA
ChIP-seq
Mathelier et al.(2014)
MA0594.1
0.626 0.667
HOXA9
M09130_2.00
Homo sapiens
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_HUMAN.H11MO.0.C
0.626 0.667
HOXA9
M09131_2.00
Homo sapiens
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_HUMAN.H11MO.0.B
0.626 0.667
Hoxa9
M09203_2.00
Mus musculus
HHATAAATCAH

DTGATTTATDD
Misc
Kulakovskiy et al.(2013)
HXA9_MOUSE.H11MO.0.B
0.626 0.667
Hoxa9
M09575_2.00
Mus musculus
WGATTKATDRBY

RVYHATMAATCW
Misc
Heinz et al.(2010)
HSC-Hoxa9_GSE33509
0.626 0.667
HOXA9
M10642_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q6
0.626 0.667
HOXA9
M10643_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_04
0.626 0.667
HOXA9
M10644_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5_01
0.626 0.667
HOXA9
M10645_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA9_Q5
0.626 0.667
HOXB9
M05291_2.00
Homo sapiens
GTCGTAAAHB

VDTTTACGAC
SELEX
Yin et al.(2017)
HOXB9_eDBD_Methyl-HT-SELEX
0.626 0.667
HOXA9
M04934_2.00
Homo sapiens
NNDTWAYKRC

GYMRTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_1
0.626 0.667
HOXA9
M04935_2.00
Homo sapiens
NNDTWACGAY

RTCGTWAHNN
SELEX
Yin et al.(2017)
HOXA9_FL_Methyl-HT-SELEX_2
0.626 0.667
Hoxa10
M00382_2.00
Mus musculus
NHWAYNNNN

NNNNRTWDN
PBM
Berger et al.(2008)
Hoxa10_2318
0.619 0.649
Hoxc10
M00421_2.00
Mus musculus
TTWATKAB

VTMATWAA
PBM
Berger et al.(2008)
Hoxc10_2779
0.619 0.649
Hoxd10
M00509_2.00
Mus musculus
NNNNNNNN

NNNNNNNN
PBM
Berger et al.(2008)
Hoxd10_2368
0.619 0.649
HOXC10
M03228_2.00
Homo sapiens
DTTTWATKDB

VHMATWAAAH
SELEX
Jolma et al.(2013)
HOXC10_1
0.619 0.649
HOXC10
M03229_2.00
Homo sapiens
NNTTWATKRB

VYMATWAANN
SELEX
Jolma et al.(2013)
HOXC10_2
0.619 0.649
HOXC10
M03230_2.00
Homo sapiens
NWTTWAYGAB

VTCRTWAAWN
SELEX
Jolma et al.(2013)
HOXC10_3
0.619 0.649
Hoxc10
M03252_2.00
Mus musculus
DTTTWAYGAY

RTCRTWAAAH
SELEX
Jolma et al.(2013)
Hoxc10_1
0.619 0.649
Hoxc10
M03253_2.00
Mus musculus
DTTTWATKRY

RYMATWAAAH
SELEX
Jolma et al.(2013)
Hoxc10_2
0.619 0.649
HOXA10
M05394_2.00
Homo sapiens
RRTCGTAAAAH

DTTTTACGAYY
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1
0.619 0.649
HOXA10
M05395_2.00
Homo sapiens
NTTTTATKRCY

RGYMATAAAAN
SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2
0.619 0.649
HOXA10
M05398_2.00
Homo sapiens
NRTCRTWAANN

NNTTWAYGAYN
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1
0.619 0.649
HOXA10
M05399_2.00
Homo sapiens
NNTTWATKRCN

NGYMATWAANN
SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2
0.619 0.649
HOXC10
M05335_2.00
Homo sapiens
NDTTTATKRCN

NGYMATAAAHN
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1
0.619 0.649
HOXC10
M05336_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2
0.619 0.649
HOXC10
M05339_2.00
Homo sapiens
NTTTTATKRCN

NGYMATAAAAN
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1
0.619 0.649
HOXC10
M05340_2.00
Homo sapiens
NRTCGTAAAWN

NWTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2
0.619 0.649
HOXD10
M05112_2.00
Homo sapiens
NKTTTATKRC

GYMATAAAMN
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1
0.619 0.649
HOXD10
M05113_2.00
Homo sapiens
RTCGTAAAHN

NDTTTACGAY
SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2
0.619 0.649
HOXD10
M05116_2.00
Homo sapiens
RGTCGTAAAAH

DTTTTACGACY
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1
0.619 0.649
HOXD10
M05117_2.00
Homo sapiens
RRYMATAAAAH

DTTTTATKRYY
SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2
0.619 0.649
Hoxa10
M09170_2.00
Mus musculus
DCATAAAYYRBH

DVYRRTTTATGH
Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C
0.619 0.649
Hoxa10
M10763_2.00
Mus musculus Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXA10_Q5
0.619 0.649
HOXD10
M10687_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD10_Q2
0.619 0.649
HOXD10
M10688_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HOXD10_Q6
0.619 0.649
HOXA10
M05396_2.00
Homo sapiens
NGTCGTAAAWN

NWTTTACGACN
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1
0.619 0.649
HOXA10
M05397_2.00
Homo sapiens
NTTTTATKRCB

VGYMATAAAAN
SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2
0.619 0.649
HOXA10
M05400_2.00
Homo sapiens
NRTCGTWAANN

NNTTWACGAYN
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1
0.619 0.649
HOXA10
M05401_2.00
Homo sapiens
NNTTWATKRYN

NRYMATWAANN
SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2
0.619 0.649
HOXC10
M05337_2.00
Homo sapiens
NTTTTATKRCN

NGYMATAAAAN
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1
0.619 0.649
HOXC10
M05338_2.00
Homo sapiens
NRTCGTAAAHN

NDTTTACGAYN
SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2
0.619 0.649
HOXC10
M05341_2.00
Homo sapiens
DTTTTATKRCH

DGYMATAAAAH
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1
0.619 0.649
HOXC10
M05342_2.00
Homo sapiens
VGTCGTAAAHN

NDTTTACGACB
SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2
0.619 0.649
HOXD10
M05114_2.00
Homo sapiens
NTTTTATKRC

GYMATAAAAN
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1
0.619 0.649
HOXD10
M05115_2.00
Homo sapiens
GTCGTAAAHN

NDTTTACGAC
SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2
0.619 0.649
HOXD10
M05118_2.00
Homo sapiens
VGTCGTAAAAH

DTTTTACGACB
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1
0.619 0.649
HOXD10
M05119_2.00
Homo sapiens
DGYAATAAAAH

DTTTTATTRCH
SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2
0.619 0.649
ceh-19
M02180_2.00
Caenorhabditis elegans
NTWAWDRNN

NNYHWTWAN
PBM
Weirauch et al.(2014)
pTH5661
0.614 0.544
CG34031
M02126_2.00
Drosophila melanogaster
NNNDNNRN

NYNNHNNN
PBM
Weirauch et al.(2014)
pTH6447
0.613 0.509
CG34031
M06548_2.00
Drosophila melanogaster
TTAATWG

CWATTAA
B1H
Mathelier et al.(2014)
MA0444.1
0.613 0.509
CG34031
M06372_2.00
Drosophila melanogaster
BTTAATWG

CWATTAAV
B1H
Zhu et al.(2011)
CG34031_Cell_FBgn0054031
0.613 0.509
CG34031
M06373_2.00
Drosophila melanogaster
NTTAATDR

YHATTAAN
B1H
Zhu et al.(2011)
CG34031_SOLEXA_FBgn0054031
0.613 0.509
zen2
M02118_2.00
Drosophila melanogaster
NNTAATKRNN

NNYMATTANN
PBM
Weirauch et al.(2014)
pTH5479
0.600 0.632
zen2
M03806_2.00
Drosophila melanogaster
BTAATKAS

STMATTAV
SELEX
Nitta et al.(2015)
zen2_1
0.600 0.632
zen2
M03807_2.00
Drosophila melanogaster
BTAATKWNNVRNNNNYBNNWMATTAV

BTAATKWNNVRNNNNYBNNWMATTAV
SELEX
Nitta et al.(2015)
zen2_2
0.600 0.632
zen2
M06501_2.00
Drosophila melanogaster
BTAATKA

TMATTAV
B1H
Mathelier et al.(2014)
MA0257.1
0.600 0.632
zen2
M06279_2.00
Drosophila melanogaster
HNBTAATKA

TMATTAVND
B1H
Zhu et al.(2011)
Zen2_Cell_FBgn0004054
0.600 0.632
zen2
M06280_2.00
Drosophila melanogaster
NNNTAATKRN

NYMATTANNN
B1H
Zhu et al.(2011)
zen2_SOLEXA_2_FBgn0004054
0.600 0.632
zen2
M06281_2.00
Drosophila melanogaster
YTAATKR

YMATTAR
B1H
Zhu et al.(2011)
Zen2_SOLEXA_FBgn0004054
0.600 0.632
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMRZ_0001964901-mRNA-1 Homeodomain 18 74

Links

Other Homeodomain family TFs
Other Schistosoma margrebowiei TFs

Invalid Input OrderBy

1752 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action