SROB_0002221601 (Schistosoma rodhaini)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SROB_0002221601 T236429_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARGFX
M05369_2.00
Homo sapiens
NYTAATTARH

DYTAATTARN
SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_1
0.605 0.281
ARGFX
M05370_2.00
Homo sapiens
HTAATYTAATTAR

YTAATTARATTAD
SELEX
Yin et al.(2017)
ARGFX_eDBD_HT-SELEX_2
0.605 0.281
ARGFX
M05371_2.00
Homo sapiens
NYTAATTAGH

DCTAATTARN
SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_1
0.605 0.281
ARGFX
M05372_2.00
Homo sapiens
HTAATYTAATTAR

YTAATTARATTAD
SELEX
Yin et al.(2017)
ARGFX_eDBD_Methyl-HT-SELEX_2
0.605 0.281
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0002221601-mRNA-1 Homeodomain 544 600

Links

Other Homeodomain family TFs
Other Schistosoma rodhaini TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000000951 Ailuropoda melanoleuca ENSAMEG00000000951 N 0.000
THAP8 Bos taurus ENSBTAG00000014995 N 0.000
THAP8 Canis familiaris ENSCAFG00000006649 N 0.000
THAP8 Callithrix jacchus ENSCJAG00000009688 N 0.000
ENSCSAG00000004276 Chlorocebus sabaeus ENSCSAG00000004276 N 0.000
THAP8 Dasypus novemcinctus ENSDNOG00000043332 N 0.000
THAP8 Homo sapiens ENSG00000161277 N 0.000
THAP8 Gorilla gorilla ENSGGOG00000024516 N 0.000
THAP8 Microcebus murinus ENSMICG00000010199 N 0.000
THAP8 Macaca mulatta ENSMMUG00000019702 N 0.000
ENSMPUG00000005786 Mustela putorius furo ENSMPUG00000005786 N 0.000
ENSNLEG00000011666 Nomascus leucogenys ENSNLEG00000011666 N 0.000
ENSOARG00000005210 Ovis aries ENSOARG00000005210 N 0.000
THAP8 Otolemur garnettii ENSOGAG00000028798 N 0.000
ENSP00000376021 Macaca fascicularis ENSP00000376021 N 0.000
ENSP00000376021-D1 Bos grunniens ENSP00000376021-D1 N 0.000
ENSPPYG00000009894 Pongo abelii ENSPPYG00000009894 N 0.000
THAP8 Pteropus vampyrus ENSPVAG00000012877 N 0.000
ENSSSCG00000002922 Sus scrofa ENSSSCG00000002922 N 0.000
ENSSTOG00000009866 Ictidomys tridecemlineatus ENSSTOG00000009866 N 0.000
THAP8 Tupaia belangeri ENSTBEG00000014630 N 0.000
THAP8 Tursiops truncatus ENSTTRG00000003916 N 0.000