SSLN_0001460801 (Schistocephalus solidus)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SSLN_0001460801 T236459_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB

VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.667 0.344
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.660 0.234
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.660 0.234
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.660 0.234
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.660 0.234
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SSLN_0001460801-mRNA-1 Homeodomain 226 271
SSLN_0001460801-mRNA-1 Homeodomain 301 318

Links

Other Homeodomain family TFs
Other Schistocephalus solidus TFs

134 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_01405 Capronia coronata A1O1_01405 N 0.000
A1O7_01283 Cladophialophora yegresii A1O7_01283 N 0.000
ANIA_05691 Aspergillus nidulans CADANIAG00003374 I 0.000
ANIA_05870 Aspergillus nidulans CADANIAG00007168 I 0.000
BAUCODRAFT_45255 Baudoinia compniacensis BAUCODRAFT_45255 N 0.000
CFIO01_07975 Colletotrichum fioriniae CFIO01_07975 I 0.000
CGGC5_14706 Colletotrichum gloeosporioides CGGC5_14706 I 0.000
CSUB01_12509 Colletotrichum sublineola CSUB01_12509 I 0.000
EURHEDRAFT_513477 Aspergillus ruber EURHEDRAFT_513477 N 0.000
FFUJ_00121 Fusarium fujikuroi FFUJ_00121 I 0.000
G647_00858 Cladophialophora carrionii G647_00858 I 0.000
G647_01344 Cladophialophora carrionii G647_01344 N 0.000
HMPREF1120_00436 Exophiala dermatitidis HMPREF1120_00436 N 0.000
OIDMADRAFT_152619 Oidiodendron maius OIDMADRAFT_152619 N 0.000
PV05_09719 Exophiala xenobiotica PV05_09719 N 0.000
PV06_06006 Exophiala oligosperma PV06_06006 N 0.000
PV07_03849 Cladophialophora immunda PV07_03849 N 0.000
PV07_06220 Cladophialophora immunda PV07_06220 N 0.000
PV08_04953 Exophiala spinifera PV08_04953 N 0.000
PV11_00229 Exophiala sideris PV11_00229 N 0.000
PV11_09753 Exophiala sideris PV11_09753 N 0.000
TSTA_122850 Talaromyces stipitatus TSTA_122850 I 0.000
Z518_10649 Rhinocladiella mackenziei Z518_10649 N 0.000
Z519_04194 Cladophialophora bantiana Z519_04194 I 0.000