SVUK_0001056001 (Strongylus vulgaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SVUK_0001056001 T236607_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.682 0.183
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.682 0.183
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.682 0.183
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.682 0.183
NOBOX
M09135_2.00
Homo sapiens
HTAATTRVB

VBYAATTAD
Misc
Kulakovskiy et al.(2013)
NOBOX_HUMAN.H11MO.0.C
0.648 0.211
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001056001-mRNA-1 Homeodomain 123 152
SVUK_0001056001-mRNA-1 Homeodomain 153 194

Links

Other Homeodomain family TFs
Other Strongylus vulgaris TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LHX6 Gorilla gorilla ENSGGOG00000008310 I 0.779
lhx8b Takifugu rubripes ENSTRUG00000017607 I 0.757
ENSP00000360811-D1 Bos grunniens ENSP00000360811-D1 I 0.734
HPBE_0000873701 Heligmosomoides bakeri HPBE_0000873701 I 0.730
ENSCSAVG00000000940 Ciona savignyi ENSCSAVG00000000940 I 0.729
Aan_R011917 Calypte anna Aan_R011917 I 0.724
MCINX008871 Melitaea cinxia MCINX008871 I 0.720
PRRX2 Cavia porcellus ENSCPOG00000021821 I 0.713
fgenesh2_pg.scaffold_23000163 Branchiostoma floridae fgenesh2_pg.scaffold_23000163 I 0.711
CGI_10009720 Crassostrea gigas CGI_10009720 I 0.702
PPAI007004 Phlebotomus papatasi PPAI007004 I 0.699
LDEC008146 Leptinotarsa decemlineata LDEC008146 I 0.695
MCINX007054 Melitaea cinxia MCINX007054 I 0.695
Ogr03859 Ophisaurus gracilis Ogr03859 I 0.694
EFV55592 Trichinella spiralis EFV55592 I 0.692
NBR_0000705501 Nippostrongylus brasiliensis NBR_0000705501 I 0.688
PEQ_0001388201 Parascaris equorum PEQ_0001388201 I 0.687
OESDEN_01216 Oesophagostomum dentatum OESDEN_01216 I 0.684
HESX1 Homo sapiens ENSG00000163666 D 0.682
tetur14g02510 Tetranychus urticae tetur14g02510 I 0.682
ENSAMEG00000004942 Ailuropoda melanoleuca ENSAMEG00000004942 I 0.680
SPU_004366 Strongylocentrotus purpuratus SPU_004366 I 0.680
ENSMODG00000001675 Monodelphis domestica ENSMODG00000001675 I 0.677
ENSPSIG00000014030 Pelodiscus sinensis ENSPSIG00000014030 I 0.674
TTRE_0000072001 Trichuris trichiura TTRE_0000072001 I 0.672
ADAC001468 Anopheles darlingi ADAC001468 I 0.669
MCOS_0000004601 Mesocestoides corti MCOS_0000004601 I 0.669
GK22877 Drosophila willistoni FBgn0224839 I 0.669
NOBOX Canis familiaris ENSCAFG00000003500 I 0.667
ENSP00000419457-D1 Bos grunniens ENSP00000419457-D1 I 0.664
HCOI01026600 Haemonchus contortus HCOI01026600 I 0.661
TELCIR_10796 Teladorsagia circumcincta TELCIR_10796 I 0.661
EVEC_0000357701 Enterobius vermicularis EVEC_0000357701 I 0.660
nRc.2.0.1.g34428 Romanomermis culicivorax nRc.2.0.1.g34428 I 0.659
ADAC008104 Anopheles darlingi ADAC008104 I 0.657
HMEL006244 Heliconius melpomene HMEL006244 I 0.657
ENSBTAP00000049813-D5 Bos grunniens ENSBTAP00000049813-D5 I 0.656
L892_g24303 Steinernema scapterisci L892_g24303 I 0.655
TCNE_0000653501 Toxocara canis TCNE_0000653501 I 0.655
GF12207 Drosophila ananassae FBgn0089246 I 0.654
SNAPOd2T00016706001 Oikopleura dioica SNAPOd2T00016706001 I 0.653
ANCCAN_10593 Ancylostoma caninum ANCCAN_10593 I 0.652
Cmyd_10001740 Chelonia mydas Cmyd_10001740 I 0.651
ENSMMUP00000027138 Macaca fascicularis ENSMMUP00000027138 I 0.648
Myotis_brandtii_NOBOX_10026198 Myotis brandtii Myotis_brandtii_NOBOX_10026198 I 0.648
Ogr09065 Ophisaurus gracilis Ogr09065 I 0.648
Pvit_13361 Pogona vitticeps Pvit_13361 I 0.648
ENSSTOG00000026570 Ictidomys tridecemlineatus ENSSTOG00000026570 I 0.648
NOBOX Homo sapiens ENSG00000106410 D 0.648
NOBOX Gorilla gorilla ENSGGOG00000022185 I 0.648
NOBOX Myotis lucifugus ENSMLUG00000004209 I 0.648
drgx Takifugu rubripes ENSTRUG00000013446 I 0.648
NOBOX Felis catus ENSFCAG00000004352 I 0.648
NOBOX Equus caballus ENSECAG00000003123 I 0.648
ENSACAG00000002147 Anolis carolinensis ENSACAG00000002147 I 0.648
NOBOX Callithrix jacchus ENSCJAG00000009917 I 0.648
ENSCSAG00000007090 Chlorocebus sabaeus ENSCSAG00000007090 I 0.648
ENSMPUG00000007079 Mustela putorius furo ENSMPUG00000007079 I 0.648
NOBOX Macaca mulatta ENSMMUG00000020609 I 0.648
ENSNLEG00000003406 Nomascus leucogenys ENSNLEG00000003406 I 0.648
NOBOX Pan troglodytes ENSPTRG00000019828 I 0.648
NOBOX Otolemur garnettii ENSOGAG00000010413 I 0.648
ENSPANG00000018829 Papio anubis ENSPANG00000018829 I 0.648
NOBOX Oryctolagus cuniculus ENSOCUG00000001027 I 0.648
ACUA026833 Anopheles culicifacies ACUA026833 I 0.647
AMAM000848 Anopheles maculatus AMAM000848 I 0.647
nRc.2.0.1.g35501 Romanomermis culicivorax nRc.2.0.1.g35501 I 0.647
BGLB013824 Biomphalaria glabrata BGLB013824 I 0.647
Gfo_R002825 Geospiza fortis Gfo_R002825 I 0.645
Cflo_02794--XP_001120105.1_APIME Camponotus floridanus Cflo_02794--XP_001120105.1_APIME I 0.644
DICVIV_02647 Dictyocaulus viviparus DICVIV_02647 I 0.644
TC000483 Tribolium castaneum TC000483 I 0.641
tetur02g13510 Tetranychus urticae tetur02g13510 I 0.637
ENSLACG00000001487 Latimeria chalumnae ENSLACG00000001487 I 0.637
Cflo_04174--XP_001120833.1_APIME Camponotus floridanus Cflo_04174--XP_001120833.1_APIME I 0.636
ACUA004306 Anopheles culicifacies ACUA004306 I 0.632
ALUE_0000848601 Ascaris lumbricoides ALUE_0000848601 I 0.631
NEMVEDRAFT_v1g198584 Nematostella vectensis NEMVEDRAFT_v1g198584 I 0.630
ENSFCAG00000029037 Felis catus ENSFCAG00000029037 I 0.627
YQE_10100 Dendroctonus ponderosae YQE_10100 I 0.626
HPLM_0000971301 Haemonchus placei HPLM_0000971301 I 0.624
ENSMGAG00000013900 Meleagris gallopavo ENSMGAG00000013900 I 0.624
HelroG173001 Helobdella robusta HelroG173001 I 0.621
TELCIR_07728 Teladorsagia circumcincta TELCIR_07728 I 0.619
BGIBMGA003233 Bombyx mori BGIBMGA003233 I 0.618
ENSTSYG00000014450 Tarsius syrichta ENSTSYG00000014450 I 0.616
SSLN_0001460801 Schistocephalus solidus SSLN_0001460801 I 0.615
T265_14002 Opisthorchis viverrini T265_14002 I 0.615
L798_06393 Zootermopsis nevadensis L798_06393 I 0.613
CGI_10016653 Crassostrea gigas CGI_10016653 I 0.613
CLEC007171 Cimex lectularius CLEC007171 I 0.611
ALUE_0001497801 Ascaris lumbricoides ALUE_0001497801 I 0.611
nLs.2.1.2.g05836 Litomosoides sigmodontis nLs.2.1.2.g05836 I 0.610
meox1 Takifugu rubripes ENSTRUG00000005193 I 0.608
DLX4 Bos taurus ENSBTAG00000007353 I 0.604
ENSBTAP00000009672-D1 Bos grunniens ENSBTAP00000009672-D1 I 0.604
DLX3 Bos taurus ENSBTAG00000017409 I 0.604
ENSOARG00000005572 Ovis aries ENSOARG00000005572 I 0.604
BGLB004491 Biomphalaria glabrata BGLB004491 I 0.601
TTAC_0001021101 Hydatigera taeniaeformis TTAC_0001021101 N 0.601
EEL_0000220001 Elaeophora elaphi EEL_0000220001 I 0.601
ASIM_0001230001 Anisakis simplex ASIM_0001230001 I 0.601