SVUK_0001315901 (Strongylus vulgaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SVUK_0001315901 T236617_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TLX3
M05233_2.00 		Homo sapiens
NAATKGNNNNNNNNNNNNNCAATTN
NAATTGNNNNNNNNNNNNNCMATTN		 SELEX
Yin et al.(2017)
TLX3_eDBD_HT-SELEX 		0.609 0.614
TLX3
M05235_2.00 		Homo sapiens
NAATTGNNNNNHNNNNCAATTN
NAATTGNNNNDNNNNNCAATTN		 SELEX
Yin et al.(2017)
TLX3_FL_HT-SELEX 		0.609 0.614
TLX3
M05234_2.00 		Homo sapiens
NAATTGNNNNNNNNNNDCAATTD
HAATTGHNNNNNNNNNNCAATTN		 SELEX
Yin et al.(2017)
TLX3_eDBD_Methyl-HT-SELEX 		0.609 0.614
TLX3
M05236_2.00 		Homo sapiens
HAATTRNNNNNNNNNYHATTV
BAATDRNNNNNNNNNYAATTD		 SELEX
Yin et al.(2017)
TLX3_FL_Methyl-HT-SELEX 		0.609 0.614
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0001315901-mRNA-1 Homeodomain 19 75

Links

Other Homeodomain family TFs
Other Strongylus vulgaris TFs

147 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPLIN_000106100 Globodera pallida GPLIN_000106100 I 0.621
fgenesh2_pg.scaffold_294000030 Branchiostoma floridae fgenesh2_pg.scaffold_294000030 I 0.620
tetur01g01560 Tetranychus urticae tetur01g01560 I 0.620
Myotis_brandtii_HOXC11_10022974 Myotis brandtii Myotis_brandtii_HOXC11_10022974 I 0.617
ANCDUO_20084 Ancylostoma duodenale ANCDUO_20084 I 0.611
ANCCEY_01444 Ancylostoma ceylanicum ANCCEY_01444 I 0.611
NV17325 Nasonia vitripennis NV17325 I 0.610
PHUM439310 Pediculus humanus PHUM439310 I 0.610
Hsal_05447--XP_001119904.1_APIME Harpegnathos saltator Hsal_05447--XP_001119904.1_APIME I 0.610
Cflo_08940--XP_001119904.1_APIME Camponotus floridanus Cflo_08940--XP_001119904.1_APIME I 0.610
TC011749 Tribolium castaneum TC011749 I 0.610
YQE_12990 Dendroctonus ponderosae YQE_12990 I 0.610
GB53941 Apis mellifera GB53941 I 0.610
Tlx1 Rattus norvegicus ENSRNOG00000016120 I 0.609
ENSSHAG00000007060 Sarcophilus harrisii ENSSHAG00000007060 I 0.609
TLX3 Sus scrofa ENSSSCG00000016999 I 0.609
tlx2 Tetraodon nigroviridis ENSTNIG00000013058 I 0.609
TLX3 Tetraodon nigroviridis ENSTNIG00000013111 I 0.609
TLX1 Taeniopygia guttata ENSTGUG00000010029 I 0.609
ENSSTOG00000026927 Ictidomys tridecemlineatus ENSSTOG00000026927 I 0.609
Tlx3 Rattus norvegicus ENSRNOG00000004976 I 0.609
ENSSTOG00000023842 Ictidomys tridecemlineatus ENSSTOG00000023842 I 0.609
ENSSHAG00000013136 Sarcophilus harrisii ENSSHAG00000013136 I 0.609
ENSPFOG00000023389 Poecilia formosa ENSPFOG00000023389 I 0.609
tlx1 Oryzias latipes ENSORLG00000000935 I 0.609
TLX3 Oryzias latipes ENSORLG00000003952 I 0.609
ENSPANG00000000216 Papio anubis ENSPANG00000000216 I 0.609
ENSONIG00000013171 Oreochromis niloticus ENSONIG00000013171 I 0.609
ENSONIG00000005019 Oreochromis niloticus ENSONIG00000005019 I 0.609
TLX3 Otolemur garnettii ENSOGAG00000029862 I 0.609
ENSONIG00000001402 Oreochromis niloticus ENSONIG00000001402 I 0.609
TLX3 Procavia capensis ENSPCAG00000004561 I 0.609
TLX1 Procavia capensis ENSPCAG00000013878 I 0.609
ENSPPYG00000002581 Pongo abelii ENSPPYG00000002581 I 0.609
ENSPPYG00000016036 Pongo abelii ENSPPYG00000016036 I 0.609
tlx1 Takifugu rubripes ENSTRUG00000000431 I 0.609
ENSPFOG00000018351 Poecilia formosa ENSPFOG00000018351 I 0.609
ENSPFOG00000001748 Poecilia formosa ENSPFOG00000001748 I 0.609
ENSPFOG00000006469 Poecilia formosa ENSPFOG00000006469 I 0.609
TLX1 Pteropus vampyrus ENSPVAG00000001727 I 0.609
LotgiG163574 Lottia gigantea LotgiG163574 I 0.609
Ogr16523 Ophisaurus gracilis Ogr16523 I 0.609
Pvit_08282 Pogona vitticeps Pvit_08282 I 0.609
Ogr08816 Ophisaurus gracilis Ogr08816 I 0.609
ENSP00000359215 Macaca fascicularis ENSP00000359215 I 0.609
ENSBTAP00000013194-D1 Bos grunniens ENSBTAP00000013194-D1 I 0.609
Pvit_16061 Pogona vitticeps Pvit_16061 I 0.609
Sakowv30005200m.g Saccoglossus kowalevskii Sakowv30005200m.g I 0.609
tlx3.S Xenopus laevis XB-GENE-866411 I 0.609
NBR_0000793601 Nippostrongylus brasiliensis NBR_0000793601 I 0.609
tlx1.L Xenopus laevis XB-GENE-865464 I 0.609
tlx3 Xenopus tropicalis XB-GENE-495044 I 0.609
tlx1 Xenopus tropicalis XB-GENE-485834 I 0.609
Cmyd_10016096 Chelonia mydas Cmyd_10016096 I 0.609
Cmyd_10005388 Chelonia mydas Cmyd_10005388 I 0.609
ENSXMAG00000005769 Xiphophorus maculatus ENSXMAG00000005769 I 0.609
ENSXMAG00000011421 Xiphophorus maculatus ENSXMAG00000011421 I 0.609
ENSXMAG00000001982 Xiphophorus maculatus ENSXMAG00000001982 I 0.609
TLX1 Tursiops truncatus ENSTTRG00000006475 I 0.609
TLX3 Takifugu rubripes ENSTRUG00000010456 I 0.609
TLX1 Otolemur garnettii ENSOGAG00000013614 I 0.609
SMAR011347 Strigamia maritima SMAR011347 I 0.609
Alligator_sinensis_CCG016335.1 Alligator sinensis Alligator_sinensis_CCG016335.1 I 0.609
Cmyd_10002939 Chelonia mydas Cmyd_10002939 I 0.609
Alligator_sinensis_CCG003817.1 Alligator sinensis Alligator_sinensis_CCG003817.1 I 0.609
Afo_R002725 Aptenodytes forsteri Afo_R002725 I 0.609
SPU_023893 Strongylocentrotus purpuratus SPU_023893 I 0.609
tlx2 Takifugu rubripes ENSTRUG00000008354 I 0.609
TLX1 Ochotona princeps ENSOPRG00000007137 I 0.609
tlx3b Danio rerio ENSDARG00000017615 I 0.609
CABZ01067175.1 Danio rerio ENSDARG00000100401 I 0.609
TLX3 Equus caballus ENSECAG00000007840 I 0.609
tlx2 Danio rerio ENSDARG00000011273 I 0.609
tlx1 Danio rerio ENSDARG00000003965 I 0.609
ENSCSAG00000009715 Chlorocebus sabaeus ENSCSAG00000009715 I 0.609
ENSCSAVG00000010706 Ciona savignyi ENSCSAVG00000010706 I 0.609
ENSECAG00000013342 Equus caballus ENSECAG00000013342 I 0.609
ENSFALG00000008660 Ficedula albicollis ENSFALG00000008660 I 0.609
TLX3 Homo sapiens ENSG00000164438 D 0.609
tlx1 Gasterosteus aculeatus ENSGACG00000003860 I 0.609
ENSGACG00000016709 Gasterosteus aculeatus ENSGACG00000016709 I 0.609
TLX1 Oryctolagus cuniculus ENSOCUG00000013136 I 0.609
TLX1 Homo sapiens ENSG00000107807 I 0.609
ENSFALG00000010915 Ficedula albicollis ENSFALG00000010915 I 0.609
TLX1 Felis catus ENSFCAG00000007077 I 0.609
TLX3 Cavia porcellus ENSCPOG00000024190 I 0.609
TLX1 Cavia porcellus ENSCPOG00000003194 I 0.609
ENSAMXG00000010208 Astyanax mexicanus ENSAMXG00000010208 I 0.609
ENSAMXG00000011990 Astyanax mexicanus ENSAMXG00000011990 I 0.609
CapteG222072 Capitella teleta CapteG222072 I 0.609
CGI_10020599 Crassostrea gigas CGI_10020599 I 0.609
ENSAMXG00000005815 Astyanax mexicanus ENSAMXG00000005815 I 0.609
TLX1 Anolis carolinensis ENSACAG00000011182 I 0.609
ENSAMEG00000003951 Ailuropoda melanoleuca ENSAMEG00000003951 I 0.609
ENSAMXG00000016200 Astyanax mexicanus ENSAMXG00000016200 I 0.609
ENSAPLG00000004931 Anas platyrhynchos ENSAPLG00000004931 I 0.609
ENSCING00000006177 Ciona intestinalis ENSCING00000006177 I 0.609
TLX1 Callithrix jacchus ENSCJAG00000017563 I 0.609
TLX3 Canis familiaris ENSCAFG00000016919 I 0.609
TLX1 Canis familiaris ENSCAFG00000009833 I 0.609
TLX3 Bos taurus ENSBTAG00000010003 I 0.609
TLX1 Bos taurus ENSBTAG00000011080 I 0.609
TLX3 Gasterosteus aculeatus ENSGACG00000017882 I 0.609
TLX2 Gallus gallus ENSGALG00000002191 I 0.609
TLX3 Monodelphis domestica ENSMODG00000006508 I 0.609
TLX1 Monodelphis domestica ENSMODG00000011900 I 0.609
ENSMPUG00000012862 Mustela putorius furo ENSMPUG00000012862 I 0.609
ENSMMUG00000017754 Macaca mulatta ENSMMUG00000017754 I 0.609
TLX1 Macaca mulatta ENSMMUG00000017667 I 0.609
TLX1 Microcebus murinus ENSMICG00000000020 I 0.609
TLX1 Myotis lucifugus ENSMLUG00000013736 I 0.609
ENSMPUG00000016927 Mustela putorius furo ENSMPUG00000016927 I 0.609
Tlx1 Mus musculus ENSMUSG00000025215 I 0.609
ENSOANG00000007794 Ornithorhynchus anatinus ENSOANG00000007794 I 0.609
TLX3 Oryctolagus cuniculus ENSOCUG00000000918 I 0.609
TLX1 Ornithorhynchus anatinus ENSOANG00000007318 I 0.609
ENSNLEG00000014836 Nomascus leucogenys ENSNLEG00000014836 I 0.609
Tlx3 Mus musculus ENSMUSG00000040610 I 0.609
ENSNLEG00000000302 Nomascus leucogenys ENSNLEG00000000302 I 0.609
TLX2 Anolis carolinensis ENSACAG00000015608 I 0.609
TLX1 Meleagris gallopavo ENSMGAG00000010200 I 0.609
ENSLACG00000000760 Latimeria chalumnae ENSLACG00000000760 I 0.609
ENSLACG00000006269 Latimeria chalumnae ENSLACG00000006269 I 0.609
ENSGMOG00000019625 Gadus morhua ENSGMOG00000019625 I 0.609
ENSGMOG00000014671 Gadus morhua ENSGMOG00000014671 I 0.609
TLX1 Gallus gallus ENSGALG00000007831 I 0.609
TLX1 Gorilla gorilla ENSGGOG00000005880 I 0.609
ENSMGAG00000000722 Meleagris gallopavo ENSMGAG00000000722 I 0.609
ENSLACG00000013284 Latimeria chalumnae ENSLACG00000013284 I 0.609
ENSLOCG00000011642 Lepisosteus oculatus ENSLOCG00000011642 I 0.609
ENSMEUG00000009488 Macropus eugenii ENSMEUG00000009488 I 0.609
TLX1 Loxodonta africana ENSLAFG00000004179 I 0.609
ENSLOCG00000009674 Lepisosteus oculatus ENSLOCG00000009674 I 0.609
TLX3 Loxodonta africana ENSLAFG00000022612 I 0.609
ENSLOCG00000001968 Lepisosteus oculatus ENSLOCG00000001968 I 0.609
SMUV_0000700001 Syphacia muris SMUV_0000700001 I 0.608
TCLT_0000478101 Thelazia callipaeda TCLT_0000478101 I 0.608
PPA19626 Pristionchus pacificus PPA19626 I 0.608
nRc.2.0.1.g47819 Romanomermis culicivorax nRc.2.0.1.g47819 I 0.607
SMU15026287 Schmidtea mediterranea SMU15026287 I 0.607
ENSGMOG00000000447 Gadus morhua ENSGMOG00000000447 I 0.607
tlx2 Xenopus tropicalis XB-GENE-5995963 I 0.607
ACYPI56505 Acyrthosiphon pisum ACYPI56505 I 0.604
Minc11316 Meloidogyne incognita Minc11316 I 0.600
SVE_0302700 Strongyloides venezuelensis SVE_0302700 I 0.599
SPAL_0001435200 Strongyloides papillosus SPAL_0001435200 I 0.599
SSTP_0000482300 Strongyloides stercoralis SSTP_0000482300 I 0.599