SVUK_0002108701 (Strongylus vulgaris)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 SVUK_0002108701 T236635_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SVUK_0002108701-mRNA-1 Homeodomain 5 40

Links

Other Homeodomain family TFs
Other Strongylus vulgaris TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TCNE_0000507501 Toxocara canis TCNE_0000507501 N 0.812
BTMF_0000534901 Brugia timori BTMF_0000534901 N 0.770
PEQ_0000660801 Parascaris equorum PEQ_0000660801 I 0.754
PEQ_0000211101 Parascaris equorum PEQ_0000211101 N 0.744
ENSMMUP00000024349 Macaca fascicularis ENSMMUP00000024349 N 0.737
YQE_03710 Dendroctonus ponderosae YQE_03710 I 0.735
WBGene00242653 Onchocerca volvulus WBGene00242653 N 0.730
Bm522 Brugia malayi Bm522 N 0.730
PEQ_0000072101 Parascaris equorum PEQ_0000072101 N 0.715
PXEA_0002133501 Protopolystoma xenopodis PXEA_0002133501 I 0.697
TCLT_0000291601 Thelazia callipaeda TCLT_0000291601 I 0.695
ANCDUO_23484 Ancylostoma duodenale ANCDUO_23484 N 0.694
nLs.2.1.2.g03086 Litomosoides sigmodontis nLs.2.1.2.g03086 I 0.684
SNAPOd2T00005340001 Oikopleura dioica SNAPOd2T00005340001 N 0.678
ANCCEY_01677 Ancylostoma ceylanicum ANCCEY_01677 N 0.678
TCLT_0000938801 Thelazia callipaeda TCLT_0000938801 N 0.672
fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA Heterobasidion annosum fgenesh3_kg.1__236__4585_0_CCPA2104.b1_CCOZ_CCPA_CCPB_CCPC_EXTA N 0.670
HETIRDRAFT_166553 Heterobasidion irregulare HETIRDRAFT_166553 N 0.670
EEL_0000988301 Elaeophora elaphi EEL_0000988301 N 0.668
CJA17634 Caenorhabditis japonica CJA17634 I 0.655
snap_masked-nMf.1.1.scaf01656-processed-gene-0.6 Meloidogyne floridensis snap_masked-nMf.1.1.scaf01656-processed-gene-0.6 N 0.651
HelroG92182 Helobdella robusta HelroG92182 N 0.645
SPRG_09223 Saprolegnia parasitica SPRG_09223 N 0.633
maker-nMf.1.1.scaf08801-snap-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf08801-snap-gene-0.8 N 0.631
ENSOGAG00000034150 Otolemur garnettii ENSOGAG00000034150 N 0.622