T265_02852 (Opisthorchis viverrini)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 T265_02852 T236652_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
HESX1
M03187_2.00
Homo sapiens
NHTAATTRVH

DBYAATTADN
SELEX
Jolma et al.(2013)
HESX1_1
0.624 0.237
HESX1
M03188_2.00
Homo sapiens
NTAATTRGYAATTAD

HTAATTRCYAATTAN
SELEX
Jolma et al.(2013)
HESX1_2
0.624 0.237
HESX1
M05227_2.00
Homo sapiens
DYAATTRV

BYAATTRH
SELEX
Yin et al.(2017)
HESX1_FL_HT-SELEX
0.624 0.237
HESX1
M05228_2.00
Homo sapiens
NYAATTRD

HYAATTRN
SELEX
Yin et al.(2017)
HESX1_FL_Methyl-HT-SELEX
0.624 0.237
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
T265_02852 Homeodomain 249 292
T265_02852 Homeodomain 317 331

Links

Other Homeodomain family TFs
Other Opisthorchis viverrini TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
fgenesh1_pg.sca_27_chr9_1_0000111 Nectria haematococca fgenesh1_pg.sca_27_chr9_1_0000111 N 0.000