TCLT_0000802001 (Thelazia callipaeda)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TCLT_0000802001 T236784_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Dmbx1
M00441_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Dmbx1_2277
0.634 0.561
DMBX1
M03236_2.00
Homo sapiens
NHTAATCCBN

NVGGATTADN
SELEX
Jolma et al.(2013)
DMBX1_1
0.634 0.561
DMBX1
M05383_2.00
Homo sapiens
NTAATCSN

NSGATTAN
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
0.634 0.561
DMBX1
M05384_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
0.634 0.561
ceh-53
M00679_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10699
0.632 0.561
ceh-37
M00674_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10716
0.604 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000802001-mRNA-1 Homeodomain 5 61

Links

Other Homeodomain family TFs
Other Thelazia callipaeda TFs

Invalid Input OrderBy

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action