TCLT_0000843001 (Thelazia callipaeda)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TCLT_0000843001 T236786_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
VSX1
M03087_2.00
Homo sapiens
YTAATTAN

NTAATTAR
SELEX
Jolma et al.(2013)
VSX1_1
0.714 0.348
VSX1
M03088_2.00
Homo sapiens
NNYAATTRRBN

NVYYAATTRNN
SELEX
Jolma et al.(2013)
VSX1_2
0.714 0.348
VSX1
M04941_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX
0.714 0.348
VSX1
M04944_2.00
Homo sapiens
NTAATTRS

SYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX
0.714 0.348
VSX1
M05869_2.00
Homo sapiens
DGCTAATTAN

NTAATTAGCH
SMiLE-seq
Isakova et al.(2017)
VSX1
0.714 0.348
VSX1
M04942_2.00
Homo sapiens
NTAAYGMN

NKCRTTAN
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1
0.714 0.348
VSX1
M04943_2.00
Homo sapiens
YYAATTRN

NYAATTRR
SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2
0.714 0.348
VSX1
M04945_2.00
Homo sapiens
NTAATTRG

CYAATTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1
0.714 0.348
VSX1
M04946_2.00
Homo sapiens
NTAAYGAN

NTCRTTAN
SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2
0.714 0.348
VAX1
M03168_2.00
Homo sapiens
YTAATKAN

NTMATTAR
SELEX
Jolma et al.(2013)
VAX1_1
0.676 0.391
VAX1
M05182_2.00
Homo sapiens
BTAATTRN

NYAATTAV
SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX
0.676 0.391
VAX1
M05183_2.00
Homo sapiens
BTMATKRN

NYMATKAV
SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX
0.676 0.391
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TCLT_0000843001-mRNA-1 Homeodomain 131 176

Links

Other Homeodomain family TFs
Other Thelazia callipaeda TFs

1229 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACOC_0000225601 Angiostrongylus costaricensis ACOC_0000225601 N 0.000
ANCCAN_16897 Ancylostoma caninum ANCCAN_16897 N 0.000
ANCCEY_10921 Ancylostoma ceylanicum ANCCEY_10921 N 0.000
CJA02799 Caenorhabditis japonica CJA02799 N 0.000
DICVIV_08156 Dictyocaulus viviparus DICVIV_08156 N 0.000
HCOI01518500 Haemonchus contortus HCOI01518500 N 0.000
HPBE_0000100701 Heligmosomoides bakeri HPBE_0000100701 N 0.000
HPLM_0001875601 Haemonchus placei HPLM_0001875601 N 0.000
NBR_0001588701 Nippostrongylus brasiliensis NBR_0001588701 N 0.000