TELCIR_18221 (Teladorsagia circumcincta)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox) IPR001356 TELCIR_18221 T236900_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CRX
M00274_2.00
Homo sapiens
NMTAATCCSN

NSGGATTAKN
PBM
Barrera et al.(2016)
CRX_REF
0.832 0.737
Crx
M00489_2.00
Mus musculus
NWAAKMBN

NVKMTTWN
PBM
Berger et al.(2008)
Crx_3485
0.832 0.737
CRX
M04949_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
CRX_FL_HT-SELEX
0.832 0.737
Crx
M08139_2.00
Mus musculus
YTAATCCYCYY

RRGRGGATTAR
ChIP-seq
Mathelier et al.(2014)
MA0467.1
0.832 0.737
CRX
M09132_2.00
Homo sapiens
BYTAATCCBHYYN

NRRDVGGATTARV
Misc
Kulakovskiy et al.(2013)
CRX_HUMAN.H11MO.0.B
0.832 0.737
Crx
M09208_2.00
Mus musculus
BYTAATCCBHYYN

NRRDVGGATTARV
Misc
Kulakovskiy et al.(2013)
CRX_MOUSE.H11MO.0.A
0.832 0.737
Crx
M09577_2.00
Mus musculus
NYTAATCC

GGATTARN
Misc
Heinz et al.(2010)
Retina-Crx_GSE20012
0.832 0.737
CRX
M10647_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CRX_Q4_01
0.832 0.737
CRX
M10648_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CRX_Q4_02
0.832 0.737
CRX
M04950_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
CRX_FL_Methyl-HT-SELEX
0.832 0.737
CRX
M00275_2.00
Homo sapiens
NMTAATCCSN

NSGGATTAKN
PBM
Barrera et al.(2016)
CRX_V66I
0.822 0.719
ceh-37
M00674_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10716
0.821 0.807
CRX
M00273_2.00
Homo sapiens
NNYTAATCCVN

NBGGATTARNN
PBM
Barrera et al.(2016)
CRX_R90W
0.821 0.719
Otx1
M00396_2.00
Mus musculus
NTAAKCYN

NRGMTTAN
PBM
Berger et al.(2008)
Otx1_2325
0.816 0.719
Otx2
M00418_2.00
Mus musculus
NTAAKMBN

NVKMTTAN
PBM
Berger et al.(2008)
Otx2_3441
0.816 0.719
OTX1
M03116_2.00
Homo sapiens
NNTAAKCGGATTANN

NNTAATCCGMTTANN
SELEX
Jolma et al.(2013)
OTX1_1
0.816 0.719
OTX1
M03117_2.00
Homo sapiens
NTAATCSB

VSGATTAN
SELEX
Jolma et al.(2013)
OTX1_2
0.816 0.719
OTX2
M03197_2.00
Homo sapiens
NHTAAKCGGATTANN

NNTAATCCGMTTADN
SELEX
Jolma et al.(2013)
OTX2_1
0.816 0.719
OTX2
M03198_2.00
Homo sapiens
HTAATCCB

VGGATTAD
SELEX
Jolma et al.(2013)
OTX2_2
0.816 0.719
Otx1
M03249_2.00
Mus musculus
NNTAAKCGGATTANN

NNTAATCCGMTTANN
SELEX
Jolma et al.(2013)
Otx1_1
0.816 0.719
Otx1
M03250_2.00
Mus musculus
NTAATCCN

NGGATTAN
SELEX
Jolma et al.(2013)
Otx1_2
0.816 0.719
oc
M03808_2.00
Drosophila melanogaster
HTAATCCB

VGGATTAD
SELEX
Nitta et al.(2015)
oc_1
0.816 0.719
OTX1
M05022_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX1_eDBD_HT-SELEX
0.816 0.719
OTX1
M05024_2.00
Homo sapiens
NTAATCCNNN

NNNGGATTAN
SELEX
Yin et al.(2017)
OTX1_FL_HT-SELEX
0.816 0.719
OTX2
M05251_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX2_FL_HT-SELEX
0.816 0.719
oc
M06502_2.00
Drosophila melanogaster
TAATCC

GGATTA
B1H
Mathelier et al.(2014)
MA0234.1
0.816 0.719
oc
M06282_2.00
Drosophila melanogaster
WTAATCC

GGATTAW
B1H
Zhu et al.(2011)
Oc_Cell_FBgn0004102
0.816 0.719
oc
M06283_2.00
Drosophila melanogaster
NTAATCCB

VGGATTAN
B1H
Zhu et al.(2011)
Oc_SOLEXA_FBgn0004102
0.816 0.719
OTX2
M09153_2.00
Homo sapiens
BYTAATCCYYN

NRRGGATTARV
Misc
Kulakovskiy et al.(2013)
OTX2_HUMAN.H11MO.0.A
0.816 0.719
Otx2
M09183_2.00
Mus musculus
HTAATCCYNYNN

NNRNRGGATTAD
Misc
Kulakovskiy et al.(2013)
OTX2_MOUSE.H11MO.0.A
0.816 0.719
Otx2
M09569_2.00
Mus musculus
NHTAATCCHB

VDGGATTADN
Misc
Heinz et al.(2010)
EpiLC-Otx2_GSE56098
0.816 0.719
oc
M09681_2.00
Drosophila melanogaster
HTAATCCN

NGGATTAD
Misc
Kulakovskiy et al.(2009)
oc
0.816 0.719
OTX1
M10673_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX1_Q5
0.816 0.719
OTX2
M10727_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX2_Q3_01
0.816 0.719
OTX2
M10728_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$OTX2_Q3
0.816 0.719
OTX1
M05023_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX1_eDBD_Methyl-HT-SELEX
0.816 0.719
OTX1
M05025_2.00
Homo sapiens
HTAATCCNHN

NDNGGATTAD
SELEX
Yin et al.(2017)
OTX1_FL_Methyl-HT-SELEX
0.816 0.719
OTX2
M05252_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
OTX2_FL_Methyl-HT-SELEX
0.816 0.719
CRX
M00270_2.00
Homo sapiens
NWDAKNN

NNMTHWN
PBM
Barrera et al.(2016)
CRX_E80A
0.811 0.719
CRX
M00271_2.00
Homo sapiens
NHDAKNN

NNMTHDN
PBM
Barrera et al.(2016)
CRX_R41Q
0.799 0.719
CRX
M00272_2.00
Homo sapiens
NNHNATNN

NNATNDNN
PBM
Barrera et al.(2016)
CRX_R41W
0.799 0.719
ceh-53
M00679_2.00
Caenorhabditis elegans
HTAATCYN

NRGATTAD
PBM
Narasimhan et al.(2015)
pTH10699
0.784 0.596
ceh-36
M00673_2.00
Caenorhabditis elegans
NWAATCYN

NRGATTWN
PBM
Narasimhan et al.(2015)
pTH10730
0.770 0.632
Dmbx1
M00441_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Dmbx1_2277
0.769 0.596
DMBX1
M03236_2.00
Homo sapiens
NHTAATCCBN

NVGGATTADN
SELEX
Jolma et al.(2013)
DMBX1_1
0.769 0.596
DMBX1
M05383_2.00
Homo sapiens
NTAATCSN

NSGATTAN
SELEX
Yin et al.(2017)
DMBX1_eDBD_HT-SELEX
0.769 0.596
DMBX1
M05384_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
DMBX1_eDBD_Methyl-HT-SELEX
0.769 0.596
HBX4_ECHGR
M02195_2.00
Echinococcus granulosus
NHTAATCYNN

NNRGATTADN
PBM
Weirauch et al.(2014)
pTH6301
0.757 0.544
NEMVEDRAFT_v1g113057
M02144_2.00
Nematostella vectensis
NYTAATCCBN

NVGGATTARN
PBM
Weirauch et al.(2014)
pTH6135
0.756 0.526
GSC2
M03080_2.00
Homo sapiens
NHTAATCCBH

DVGGATTADN
SELEX
Jolma et al.(2013)
GSC2_1
0.745 0.596
GSC2
M04920_2.00
Homo sapiens
NTAATNNN

NNNATTAN
SELEX
Yin et al.(2017)
GSC2_eDBD_HT-SELEX
0.745 0.596
GSC2
M04921_2.00
Homo sapiens
NTAATCYN

NRGATTAN
SELEX
Yin et al.(2017)
GSC2_eDBD_Methyl-HT-SELEX
0.745 0.596
Gsc
M00411_2.00
Mus musculus
NNTAATYBN

NVRATTANN
PBM
Berger et al.(2008)
Gsc_2327
0.736 0.579
GSC
M03146_2.00
Homo sapiens
NHTAATCCNH

DNGGATTADN
SELEX
Jolma et al.(2013)
GSC_1
0.736 0.579
GSC
M05134_2.00
Homo sapiens
NTAATCCB

VGGATTAN
SELEX
Yin et al.(2017)
GSC_eDBD_HT-SELEX
0.736 0.579
GSC
M05136_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
GSC_FL_HT-SELEX
0.736 0.579
gsc
M09584_2.00
Xenopus tropicalis
NTAATCYN

NRGATTAN
Misc
Heinz et al.(2010)
FrogEmbryos-GSC_DRA000576
0.736 0.579
GSC
M05135_2.00
Homo sapiens
HTAATCCB

VGGATTAD
SELEX
Yin et al.(2017)
GSC_eDBD_Methyl-HT-SELEX
0.736 0.579
GSC
M05137_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
GSC_FL_Methyl-HT-SELEX
0.736 0.579
Gsc
M02120_2.00
Drosophila melanogaster
NTAATCYN

NRGATTAN
PBM
Weirauch et al.(2014)
pTH5511
0.736 0.561
Gsc
M03817_2.00
Drosophila melanogaster
TAATCCB

VGGATTA
SELEX
Nitta et al.(2015)
Gsc_1
0.736 0.561
Gsc
M03818_2.00
Drosophila melanogaster
TAATCGGATTA

TAATCCGATTA
SELEX
Nitta et al.(2015)
Gsc_2
0.736 0.561
Gsc
M03819_2.00
Drosophila melanogaster
TAATCYNHTAATCBN

NVGATTADNRGATTA
SELEX
Nitta et al.(2015)
Gsc_3
0.736 0.561
Gsc
M03820_2.00
Drosophila melanogaster
TAATCGGATTA

TAATCCGATTA
SELEX
Nitta et al.(2015)
Gsc_4
0.736 0.561
Gsc
M03821_2.00
Drosophila melanogaster
TAATCYNWTWATCYB

VRGATWAWNRGATTA
SELEX
Nitta et al.(2015)
Gsc_5
0.736 0.561
Gsc
M05873_2.00
Drosophila melanogaster
TAATCSNHTWA

TWADNSGATTA
SMiLE-seq
Isakova et al.(2017)
Gsc
0.736 0.561
Gsc
M06509_2.00
Drosophila melanogaster
TAATCY

RGATTA
B1H
Mathelier et al.(2014)
MA0190.1
0.736 0.561
Gsc
M06297_2.00
Drosophila melanogaster
VNTAATCY

RGATTANB
B1H
Zhu et al.(2011)
Gsc_Cell_FBgn0010323
0.736 0.561
Gsc
M06298_2.00
Drosophila melanogaster
NTAATCY

RGATTAN
B1H
Zhu et al.(2011)
Gsc_SOLEXA_FBgn0010323
0.736 0.561
CBG01820
M01241_2.00
Caenorhabditis briggsae
NTAATCCN

NGGATTAN
PBM
Lambert et al.(2019)
pTH11454
0.731 0.526
PITX2
M00313_2.00
Homo sapiens
NWAAKHYN

NRDMTTWN
PBM
Barrera et al.(2016)
PITX2_REF
0.724 0.544
Pitx3
M00428_2.00
Mus musculus
NTAAKCYN

NRGMTTAN
PBM
Berger et al.(2008)
Pitx3_3497
0.724 0.544
Pitx2
M00440_2.00
Mus musculus
NTAATCCN

NGGATTAN
PBM
Berger et al.(2008)
Pitx2_2274
0.724 0.544
Ptx1
M02123_2.00
Drosophila melanogaster
NTAATCYNN

NNRGATTAN
PBM
Weirauch et al.(2014)
pTH5644
0.724 0.544
Ptx1
M00562_2.00
Drosophila melanogaster
NYTAATCCBN

NVGGATTARN
PBM
Busser et al.(2012a)
Ptx1
0.724 0.544
PITX3
M03111_2.00
Homo sapiens
NHTAATCCN

NGGATTADN
SELEX
Jolma et al.(2013)
PITX3_1
0.724 0.544
Ptx1
M03842_2.00
Drosophila melanogaster
NTAATCCN

NGGATTAN
SELEX
Nitta et al.(2015)
Ptx1_1
0.724 0.544
Ptx1
M03843_2.00
Drosophila melanogaster
NTAATCCN

NGGATTAN
SELEX
Nitta et al.(2015)
Ptx1_2
0.724 0.544
Ptx1
M03844_2.00
Drosophila melanogaster
NCGHTAATCCN

NGGATTADCGN
SELEX
Nitta et al.(2015)
Ptx1_3
0.724 0.544
PITX2
M05229_2.00
Homo sapiens
NTAAKCCN

NGGMTTAN
SELEX
Yin et al.(2017)
PITX2_eDBD_HT-SELEX
0.724 0.544
PITX2
M05231_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX2_FL_HT-SELEX
0.724 0.544
PITX3
M04997_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_HT-SELEX
0.724 0.544
Ptx1
M06521_2.00
Drosophila melanogaster
YTAATCC

GGATTAR
B1H
Mathelier et al.(2014)
MA0201.1
0.724 0.544
Ptx1
M06319_2.00
Drosophila melanogaster
YTAATCC

GGATTAR
B1H
Zhu et al.(2011)
Ptx1_Cell_FBgn0020912
0.724 0.544
Ptx1
M06320_2.00
Drosophila melanogaster
NYTAATCC

GGATTARN
B1H
Zhu et al.(2011)
Ptx1_SOLEXA_FBgn0020912
0.724 0.544
PITX2
M10720_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q2
0.724 0.544
PITX2
M10721_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q4
0.724 0.544
PITX2
M10722_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX2_Q6
0.724 0.544
PITX3
M10660_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q2
0.724 0.544
PITX3
M10661_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3_01
0.724 0.544
PITX3
M10662_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX3_Q3
0.724 0.544
PITX2
M00311_2.00
Homo sapiens
TTAATCCY

RGGATTAA
PBM
Barrera et al.(2016)
PITX2_R108H
0.724 0.544
PITX2
M00312_2.00
Homo sapiens
NNNTATWAATTNN

NNAATTWATANNN
PBM
Barrera et al.(2016)
PITX2_R130W
0.724 0.544
PITX2
M00314_2.00
Homo sapiens
NTAATMYN

NRKATTAN
PBM
Barrera et al.(2016)
PITX2_T114P
0.724 0.544
PITX2
M05230_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
PITX2_eDBD_Methyl-HT-SELEX
0.724 0.544
PITX2
M05232_2.00
Homo sapiens
YTAATCCY

RGGATTAR
SELEX
Yin et al.(2017)
PITX2_FL_Methyl-HT-SELEX
0.724 0.544
PITX3
M04998_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX3_eDBD_Methyl-HT-SELEX
0.724 0.544
Pitx1
M00415_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Pitx1_2312
0.724 0.526
PITX1
M03082_2.00
Homo sapiens
NHTAATCCN

NGGATTADN
SELEX
Jolma et al.(2013)
PITX1_1
0.724 0.526
PITX1
M03083_2.00
Homo sapiens
NHTAATCCN

NGGATTADN
SELEX
Jolma et al.(2013)
PITX1_2
0.724 0.526
PITX1
M03084_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Jolma et al.(2013)
PITX1_3
0.724 0.526
PITX1
M04928_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX1_eDBD_HT-SELEX
0.724 0.526
PITX1
M04930_2.00
Homo sapiens
NTAATCCN

NGGATTAN
SELEX
Yin et al.(2017)
PITX1_FL_HT-SELEX
0.724 0.526
Pitx1
M09182_2.00
Mus musculus
NYWAAKCCYH

DRGGMTTWRN
Misc
Kulakovskiy et al.(2013)
PITX1_MOUSE.H11MO.0.C
0.724 0.526
PITX1
M10640_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX1_Q4
0.724 0.526
PITX1
M10641_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PITX1_Q6
0.724 0.526
PITX2
M00310_2.00
Homo sapiens
HTAATCYN

NRGATTAD
PBM
Barrera et al.(2016)
PITX2_L100Q
0.724 0.526
PITX1
M04929_2.00
Homo sapiens
NTAAKCCN

NGGMTTAN
SELEX
Yin et al.(2017)
PITX1_eDBD_Methyl-HT-SELEX
0.724 0.526
PITX1
M04931_2.00
Homo sapiens
HTAATCCN

NGGATTAD
SELEX
Yin et al.(2017)
PITX1_FL_Methyl-HT-SELEX
0.724 0.526
DPRX
M03237_2.00
Homo sapiens
NHTAATCYNN

NNRGATTADN
SELEX
Jolma et al.(2013)
DPRX_1
0.675 0.404
DPRX
M03238_2.00
Homo sapiens
NRGMTAATCYN

NRGATTAKCYN
SELEX
Jolma et al.(2013)
DPRX_2
0.675 0.404
DPRX
M05388_2.00
Homo sapiens
VGMTAATCYN

NRGATTAKCB
SELEX
Yin et al.(2017)
DPRX_eDBD_HT-SELEX
0.675 0.404
DPRX
M05389_2.00
Homo sapiens
AGATMATCYN

NRGATKATCT
SELEX
Yin et al.(2017)
DPRX_eDBD_Methyl-HT-SELEX
0.675 0.404
AGAP006642
M02035_2.00
Anopheles gambiae
NHTAATCY

RGATTADN
PBM
Weirauch et al.(2014)
pTH6201
0.615 0.333
dve
M02122_2.00
Drosophila melanogaster
NTAATCCV

BGGATTAN
PBM
Weirauch et al.(2014)
pTH6218
0.615 0.333
Obox6
M00490_2.00
Mus musculus
NTAATCYNN

NNRGATTAN
PBM
Berger et al.(2008)
Obox6_3440
0.611 0.351
dharma
M02080_2.00
Danio rerio
NNRAKCY

RGMTYNN
PBM
Weirauch et al.(2014)
pTH6530
0.603 0.474
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TELCIR_18221 Homeodomain 7 63

Links

Other Homeodomain family TFs
Other Teladorsagia circumcincta TFs

1138 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AOL_s00080g52 Arthrobotrys oligospora AOL_s00080g52 N 0.000
PEX1_016650 Penicillium expansum PEX1_016650 N 0.000
PITC_097480 Penicillium italicum PITC_097480 N 0.000
PMAA_065760 Talaromyces marneffei PMAA_065760 N 0.000
PVAR5_8994 Byssochlamys spectabilis PVAR5_8994 N 0.000
TSTA_085800 Talaromyces stipitatus TSTA_085800 N 0.000
U727_00430440271 Penicillium solitum U727_00430440271 N 0.000
V499_01981 Pseudogymnoascus pannorum V499_01981 N 0.000
e_gw1.00042.454.1 Aspergillus carbonarius e_gw1.00042.454.1 N 0.000
Pc06g01830 Penicillium chrysogenum Pc06g01830 N 0.000
PDIP_65380 Penicillium digitatum PDIP_65380 N 0.000
PDE_00479 Penicillium oxalicum PDE_00479 N 0.000
PCH_Pc06g01830 Penicillium rubens PCH_Pc06g01830 N 0.000
CADAFLAG00001166 Aspergillus flavus CADAFLAG00001166 N 0.000
CADANGAG00001393 Aspergillus niger CADANGAG00001393 N 0.000
ANIA_10132 Aspergillus nidulans CADANIAG00001758 N 0.000
ATEG_05233 Aspergillus terreus CADATEAG00005458 N 0.000
NFIA_009700 Neosartorya fischeri CADNFIAG00002079 N 0.000
DRE_01531 Drechslerella stenobrocha DRE_01531 N 0.000
EURHEDRAFT_512248 Aspergillus ruber EURHEDRAFT_512248 N 0.000
GMDG_02152 Pseudogymnoascus destructans GMDG_02152 N 0.000
GSTUM_00009748001 Tuber melanosporum GSTUM_00009748001 N 0.000
PMAA_065760 Penicillium marneffei PMAA_065760 N 0.000