CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CBG01026
(
Caenorhabditis briggsae
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
CBG01026
T237236_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg-1
M00680_2.00
Caenorhabditis elegans
NNTAATYNN
NNRATTANN
PBM
Narasimhan et al.(2015)
pTH10787
0.851
0.851
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG01026
Paired box
19
101
HNTIGKMTRRTSQHESAVKHSSNNSSGGAGTKPKVATPQVVAKIEQYKRDNPTIFAWEIREKLINEEVCTTPPSVSSINRILR
CBG01026
Homeodomain
206
262
RLSRSTFSNDQLQSLEEVFLREPYPSQTERADLVKRTGLPEARIQVWFSNRRAKWRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Caenorhabditis briggsae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE07683
Caenorhabditis remanei
CRE07683
I
0.915
eyg-1
Caenorhabditis elegans
WBGene00013147
D
0.844
PEQ_0001032101
Parascaris equorum
PEQ_0001032101
N
0.747
ASU_08722
Ascaris suum
ASU_08722
I
0.725
TCNE_0000883101
Toxocara canis
TCNE_0000883101
I
0.705