CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE07683
(
Caenorhabditis remanei
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
CRE07683
T237249_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg-1
M00680_2.00
Caenorhabditis elegans
NNTAATYNN
NNRATTANN
PBM
Narasimhan et al.(2015)
pTH10787
0.884
0.884
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE07683
Paired box
24
100
KMTRRNSQHEPGKPPGNSNSGGAGTKPKVATPQVVAKIEQYKRDNPTIFAWEIREKLISEAVCTTPPSVSSINRILR
CRE07683
Homeodomain
207
263
RLSRSTFSNEQLQSLEEVFLREPYPSQTERADLVKRTGLPEARIQVWFSNRRAKWRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Caenorhabditis remanei
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG01026
Caenorhabditis briggsae
CBG01026
I
0.915
eyg-1
Caenorhabditis elegans
WBGene00013147
D
0.844
ANCCAN_21794
Ancylostoma caninum
ANCCAN_21794
N
0.736
PEQ_0001032101
Parascaris equorum
PEQ_0001032101
N
0.723
ASU_08722
Ascaris suum
ASU_08722
I
0.717
DICVIV_03222
Dictyocaulus viviparus
DICVIV_03222
I
0.713
ANCCEY_03349
Ancylostoma ceylanicum
ANCCEY_03349
N
0.705
L892_g3679
Steinernema scapterisci
L892_g3679
I
0.702