CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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DAPPUDRAFT_253988
(
Daphnia pulex
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
DAPPUDRAFT_253988
T237253_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.712
0.712
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFX72797
Paired box
91
186
AAAGGLSSSAVSKLLAAASASSGPAGHGGVMGARPSGIIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNGTAPSVSSINRILR
EFX72797
Homeodomain
459
515
RRNRTTFSTGQLRELEREFEKTHYPCVATRERLASQTQLSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Daphnia pulex
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.712
GE20121
Drosophila yakuba
FBgn0237444
I
0.712
GK12628
Drosophila willistoni
FBgn0214637
I
0.712
GJ13266
Drosophila virilis
FBgn0200492
I
0.712
HMEL010417
Heliconius melpomene
HMEL010417
I
0.712
KGM_15291
Danaus plexippus
KGM_15291
I
0.712
MDOA006963
Musca domestica
MDOA006963
I
0.712
LCUP004290
Lucilia cuprina
LCUP004290
I
0.712
TC007194
Tribolium castaneum
TC007194
I
0.712
PHUM427950
Pediculus humanus
PHUM427950
I
0.712
AGAP011417
Anopheles gambiae
AGAP011417
I
0.712
GJ13265
Drosophila virilis
FBgn0200491
I
0.712
GM24656
Drosophila sechellia
FBgn0179519
I
0.712
GF24979
Drosophila ananassae
FBgn0101971
I
0.712
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.712
eyg
Drosophila melanogaster
FBgn0000625
D
0.712
GH16064
Drosophila grimshawi
FBgn0123535
I
0.712
GG13831
Drosophila erecta
FBgn0106094
I
0.712
GI12329
Drosophila mojavensis
FBgn0135086
I
0.712
GH16065
Drosophila grimshawi
FBgn0123536
I
0.712
GI12327
Drosophila mojavensis
FBgn0135084
I
0.712
GL24956
Drosophila persimilis
FBgn0162543
I
0.712
MDOA004637
Musca domestica
MDOA004637
I
0.706
LCUP004289
Lucilia cuprina
LCUP004289
I
0.706
GF24980
Drosophila ananassae
FBgn0101972
I
0.706