ENSAPLG00000005016 (Anas platyrhynchos)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSAPLG00000005016 T237272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pax7
M00541_2.00
Mus musculus
NNVATTWN

NWAATBNN
PBM
Berger et al.(2008)
Pax7_3783
0.860 0.860
PAX7
M03292_2.00
Homo sapiens
WAATYRATTA

TAATYRATTW
SELEX
Jolma et al.(2013)
PAX7_1
0.860 0.860
PAX7
M03293_2.00
Homo sapiens
TAATYGATTA

TAATCRATTA
SELEX
Jolma et al.(2013)
PAX7_2
0.860 0.860
PAX7
M05416_2.00
Homo sapiens
NDSCGTGACGAATYR

YRATTCGTCACGSHN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1
0.860 0.860
PAX7
M05417_2.00
Homo sapiens
NSGTCACGSHWRTTAN

NTAAYWDSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2
0.860 0.860
PAX7
M05418_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3
0.860 0.860
PAX7
M05422_2.00
Homo sapiens
BVATTMGTCACGSHN

NDSCGTGACKAATBV
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1
0.860 0.860
PAX7
M05423_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2
0.860 0.860
PAX7
M05424_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3
0.860 0.860
PAX7
M05874_2.00
Homo sapiens
ATTMGTYACGSHN

NDSCGTRACKAAT
SMiLE-seq
Isakova et al.(2017)
PAX7
0.860 0.860
Pax7
M09586_2.00
Mus musculus
NNNNNYAATTDNNHAATTAN

NTAATTDNNHAATTRNNNNN
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1
0.860 0.860
Pax7
M09587_2.00
Mus musculus
DTAATYDGATTA

TAATCHRATTAH
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2
0.860 0.860
Pax7
M09588_2.00
Mus musculus
TAATTGATTW

WAATCAATTA
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3
0.860 0.860
PAX7
M05419_2.00
Homo sapiens
NVATTVGTCRCGSYN

NRSCGYGACBAATBN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1
0.860 0.860
PAX7
M05420_2.00
Homo sapiens
NNGTCACGSHHRTTAN

NTAAYDDSCGTGACNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2
0.860 0.860
PAX7
M05421_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3
0.860 0.860
PAX7
M05425_2.00
Homo sapiens
YRATTMGTCACGSHN

NDSCGTGACKAATYR
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1
0.860 0.860
PAX7
M05426_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2
0.860 0.860
PAX7
M05427_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3
0.860 0.860
PAX3
M00358_2.00
Homo sapiens
NRTNNNN

NNNNAYN
PBM
Barrera et al.(2016)
PAX3_REF
0.816 0.816
PAX3
M03297_2.00
Homo sapiens
TAATYRATTA

TAATYRATTA
SELEX
Jolma et al.(2013)
PAX3_1
0.816 0.816
PAX3
M03885_2.00
Homo sapiens
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
PAX3_1
0.816 0.816
PAX3
M03886_2.00
Homo sapiens
RATTMGTCACGST

ASCGTGACKAATY
SELEX
Nitta et al.(2015)
PAX3_2
0.816 0.816
PAX3
M05438_2.00
Homo sapiens
NSGTCACGSHHATTAN

NTAATDDSCGTGACSN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1
0.816 0.816
PAX3
M05439_2.00
Homo sapiens
NDAATCRATTMN

NKAATYGATTHN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2
0.816 0.816
PAX3
M05440_2.00
Homo sapiens
NBRATTMGTCACGSHN

NDSCGTGACKAATYVN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3
0.816 0.816
PAX3
M09585_2.00
Homo sapiens
WSYRTGACWAATBNN

NNVATTWGTCAYRSW
Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063
0.816 0.816
PAX3
M10816_2.00
Homo sapiens
TCGTCACRCHYHM

KDRDGYGTGACGA
Transfac
Matys et al.(2006)
V$PAX3_01
0.816 0.816
PAX3
M10817_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX3_B
0.816 0.816
PAX3
M00359_2.00
Homo sapiens
NTAATYRV

BYRATTAN
PBM
Barrera et al.(2016)
PAX3_Y90H
0.816 0.816
PAX3
M05441_2.00
Homo sapiens
NNGTCACGSHWRTTAN

NTAAYWDSCGTGACNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1
0.816 0.816
PAX3
M05442_2.00
Homo sapiens
NWAATCRATTAN

NTAATYGATTWN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2
0.816 0.816
PAX3
M05443_2.00
Homo sapiens
NNRATTVGTCRCGSHN

NDSCGYGACBAATYNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3
0.816 0.816
PAX3
M00352_2.00
Homo sapiens
VNTAATYR

YRATTANB
PBM
Barrera et al.(2016)
PAX3_G48R
0.810 0.810
PAX3
M00353_2.00
Homo sapiens
NNNNRTNNN

NNNAYNNNN
PBM
Barrera et al.(2016)
PAX3_N47H
0.810 0.810
PAX3
M00354_2.00
Homo sapiens
NNNRYNN

NNRYNNN
PBM
Barrera et al.(2016)
PAX3_N47K
0.810 0.810
PAX3
M00355_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_P50L
0.810 0.810
PAX3
M00356_2.00
Homo sapiens
NNKWCAYDDWN

NWHHRTGWMNN
PBM
Barrera et al.(2016)
PAX3_R270C
0.810 0.810
PAX3
M00357_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_R56L
0.810 0.810
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000004630 Paired box 29 157
ENSAPLP00000004630 Homeodomain 217 273

Links

Other Homeodomain,Paired box family TFs
Other Anas platyrhynchos TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSFALG00000012312 Ficedula albicollis ENSFALG00000012312 I 1.000
Brh_R006623 Buceros rhinoceros Brh_R006623 I 0.934
PAX3 Pteropus vampyrus ENSPVAG00000007498 I 0.927
PAX7 Oryctolagus cuniculus ENSOCUG00000006146 I 0.890
ENSPANG00000015169 Papio anubis ENSPANG00000015169 I 0.890
ENSCSAG00000000870 Chlorocebus sabaeus ENSCSAG00000000870 I 0.855
PAX7 Meleagris gallopavo ENSMGAG00000005870 I 0.855
PAX7 Otolemur garnettii ENSOGAG00000016376 I 0.846
PAX7 Loxodonta africana ENSLAFG00000011762 I 0.846
PAX7 Pan troglodytes ENSPTRG00000000253 I 0.846
PAX7 Dasypus novemcinctus ENSDNOG00000007584 I 0.846
PAX7 Homo sapiens ENSG00000009709 D 0.846
PAX7 Macaca mulatta ENSMMUG00000017444 I 0.846
PAX7 Gorilla gorilla ENSGGOG00000004213 I 0.846
ENSMEUG00000001822 Macropus eugenii ENSMEUG00000001822 I 0.846
ENSGALG00000003782 Gallus gallus ENSGALG00000003782 I 0.846
ENSMPUG00000016202 Mustela putorius furo ENSMPUG00000016202 I 0.846
Pax7 Rattus norvegicus ENSRNOG00000018739 I 0.846
ENSNLEG00000007812 Nomascus leucogenys ENSNLEG00000007812 I 0.846
Pax7 Mus musculus ENSMUSG00000028736 D 0.846
PAX7 Felis catus ENSFCAG00000008765 I 0.846
ENSPPYG00000001801 Pongo abelii ENSPPYG00000001801 I 0.846
PAX7 Bos taurus ENSBTAG00000014967 I 0.846
PAX7 Canis familiaris ENSCAFG00000015539 I 0.846
PAX7 Cavia porcellus ENSCPOG00000014574 I 0.846
Aan_R006049 Calypte anna Aan_R006049 I 0.846
ENSAMEG00000017082 Ailuropoda melanoleuca ENSAMEG00000017082 I 0.846
Afo_R012987 Aptenodytes forsteri Afo_R012987 I 0.846
PAX7 Tursiops truncatus ENSTTRG00000004465 I 0.846
Pvit_06262 Pogona vitticeps Pvit_06262 I 0.846
ENSP00000364524 Macaca fascicularis ENSP00000364524 I 0.846
ENSSTOG00000020868 Ictidomys tridecemlineatus ENSSTOG00000020868 I 0.846
ENSBTAP00000019924-D1 Bos grunniens ENSBTAP00000019924-D1 I 0.846
ENSSHAG00000005424 Sarcophilus harrisii ENSSHAG00000005424 I 0.846
PAX7 Callithrix jacchus ENSCJAG00000007521 I 0.846
pax7.L Xenopus laevis XB-GENE-865678 I 0.841
Myotis_brandtii_Pax7_10009014 Myotis brandtii Myotis_brandtii_Pax7_10009014 I 0.841
pax7 Xenopus tropicalis XB-GENE-487140 I 0.841
pax7a Gasterosteus aculeatus ENSGACG00000012890 I 0.838
PAX3 Oryctolagus cuniculus ENSOCUG00000017507 I 0.838
PAX7 Microcebus murinus ENSMICG00000016256 I 0.838
ENSLACG00000019159 Latimeria chalumnae ENSLACG00000019159 I 0.835
ENSOARG00000010587 Ovis aries ENSOARG00000010587 I 0.835
ENSLOCG00000003864 Lepisosteus oculatus ENSLOCG00000003864 I 0.830
ENSPFOG00000013988 Poecilia formosa ENSPFOG00000013988 I 0.830
PAX7 Oryzias latipes ENSORLG00000004269 I 0.830
pax7a Tetraodon nigroviridis ENSTNIG00000014797 I 0.830
PAX7 Ochotona princeps ENSOPRG00000007352 I 0.830
pax7a Takifugu rubripes ENSTRUG00000015245 I 0.830
ENSONIG00000014283 Oreochromis niloticus ENSONIG00000014283 I 0.830
PAX7 Gasterosteus aculeatus ENSGACG00000001703 I 0.830
ENSAMXG00000024811 Astyanax mexicanus ENSAMXG00000024811 I 0.830
pax7b Danio rerio ENSDARG00000070818 I 0.830
ENSGMOG00000001549 Gadus morhua ENSGMOG00000001549 I 0.830
pax7a Danio rerio ENSDARG00000100398 I 0.824
ENSAMXG00000003799 Astyanax mexicanus ENSAMXG00000003799 I 0.824
ENSONIG00000001596 Oreochromis niloticus ENSONIG00000001596 I 0.819
ENSLACG00000006342 Latimeria chalumnae ENSLACG00000006342 I 0.816
PAX7 Sorex araneus ENSSARG00000008062 I 0.814
PAX3 Ornithorhynchus anatinus ENSOANG00000007096 I 0.808
PAX3 Procavia capensis ENSPCAG00000000403 I 0.807
PAX3 Takifugu rubripes ENSTRUG00000013444 I 0.804
Gfo_R010293 Geospiza fortis Gfo_R010293 I 0.804
PAX3 Pan troglodytes ENSPTRG00000012969 I 0.802
Pax3 Rattus norvegicus ENSRNOG00000013670 I 0.802
ENSPSIG00000005535 Pelodiscus sinensis ENSPSIG00000005535 I 0.802
ENSCSAG00000007841 Chlorocebus sabaeus ENSCSAG00000007841 I 0.802
ENSPPYG00000013219 Pongo abelii ENSPPYG00000013219 I 0.802
fgenesh2_kg.scaffold_259000002 Branchiostoma floridae fgenesh2_kg.scaffold_259000002 I 0.802
fgenesh2_kg.scaffold_211000002 Branchiostoma floridae fgenesh2_kg.scaffold_211000002 I 0.802
Pvit_18803 Pogona vitticeps Pvit_18803 I 0.802
ENSP00000375921 Macaca fascicularis ENSP00000375921 I 0.802
PAX3 Cavia porcellus ENSCPOG00000006276 I 0.802
ENSPANG00000008818 Papio anubis ENSPANG00000008818 I 0.802
ENSAMEG00000007444 Ailuropoda melanoleuca ENSAMEG00000007444 I 0.802
PAX3 Canis familiaris ENSCAFG00000016041 I 0.802
PAX3 Bos taurus ENSBTAG00000009950 I 0.802
PAX3 Tupaia belangeri ENSTBEG00000010268 I 0.802
PAX3 Anolis carolinensis ENSACAG00000004981 I 0.802
ENSSHAG00000016542 Sarcophilus harrisii ENSSHAG00000016542 I 0.802
PAX3 Loxodonta africana ENSLAFG00000008041 I 0.802
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.802
ENSBTAP00000013131-D1 Bos grunniens ENSBTAP00000013131-D1 I 0.802
ENSSTOG00000008650 Ictidomys tridecemlineatus ENSSTOG00000008650 I 0.802
Pax3 Mus musculus ENSMUSG00000004872 I 0.802
ENSMPUG00000016673 Mustela putorius furo ENSMPUG00000016673 I 0.802
PAX3 Homo sapiens ENSG00000135903 D 0.802
ENSNLEG00000009611 Nomascus leucogenys ENSNLEG00000009611 I 0.802
PAX3 Otolemur garnettii ENSOGAG00000001304 I 0.802
PAX3 Erinaceus europaeus ENSEEUG00000012346 I 0.802
PAX3 Monodelphis domestica ENSMODG00000021190 I 0.802
PAX3 Equus caballus ENSECAG00000014549 I 0.802
PAX3 Microcebus murinus ENSMICG00000000336 I 0.802
ENSMEUG00000013628 Macropus eugenii ENSMEUG00000013628 I 0.802
PAX3 Felis catus ENSFCAG00000018967 I 0.802
PAX3 Gorilla gorilla ENSGGOG00000015636 I 0.802
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.802
PAX3 Myotis lucifugus ENSMLUG00000014155 I 0.802
PAX3 Dasypus novemcinctus ENSDNOG00000001871 I 0.801
PAX3 Tursiops truncatus ENSTTRG00000000379 I 0.798
PAX3 Echinops telfairi ENSETEG00000006800 I 0.798
PAX3 Taeniopygia guttata ENSTGUG00000007761 I 0.797
ENSLOCG00000004189 Lepisosteus oculatus ENSLOCG00000004189 I 0.797
pax3a Danio rerio ENSDARG00000010192 I 0.797
ENSFALG00000006722 Ficedula albicollis ENSFALG00000006722 I 0.797
ENSXMAG00000012884 Xiphophorus maculatus ENSXMAG00000012884 I 0.793
ENSOARG00000020289 Ovis aries ENSOARG00000020289 I 0.791
PAX7 Choloepus hoffmanni ENSCHOG00000005130 I 0.786
ENSVPAG00000012251 Vicugna pacos ENSVPAG00000012251 I 0.786
PAX3 Tetraodon nigroviridis ENSTNIG00000014313 I 0.786
PAX3 Takifugu rubripes ENSTRUG00000009198 I 0.785
ENSTSYG00000009638 Tarsius syrichta ENSTSYG00000009638 I 0.783
ENSGMOG00000006159 Gadus morhua ENSGMOG00000006159 I 0.782
ENSPFOG00000014283 Poecilia formosa ENSPFOG00000014283 I 0.780
ENSXMAG00000008304 Xiphophorus maculatus ENSXMAG00000008304 I 0.780
CGI_10026438 Crassostrea gigas CGI_10026438 I 0.780
ENSONIG00000010028 Oreochromis niloticus ENSONIG00000010028 I 0.780
pax3.S Xenopus laevis XB-GENE-482744 I 0.780
Myotis_brandtii_Pax3_10032963 Myotis brandtii Myotis_brandtii_Pax3_10032963 I 0.779
pax3.L Xenopus laevis XB-GENE-6252072 I 0.778
PAX3 Tetraodon nigroviridis ENSTNIG00000015279 I 0.777
ENSXMAG00000015270 Xiphophorus maculatus ENSXMAG00000015270 I 0.775
ENSPFOG00000007769 Poecilia formosa ENSPFOG00000007769 I 0.775
ENSCING00000005904 Ciona intestinalis ENSCING00000005904 I 0.773
ENSCSAVG00000004794 Ciona savignyi ENSCSAVG00000004794 I 0.770
ENSONIG00000014632 Oreochromis niloticus ENSONIG00000014632 I 0.769
ENSPFOG00000016934 Poecilia formosa ENSPFOG00000016934 I 0.769
pax3 Xenopus tropicalis XB-GENE-482740 I 0.767
pax3b Gasterosteus aculeatus ENSGACG00000014017 I 0.758
PAX3 Oryzias latipes ENSORLG00000015932 I 0.758
PAX3 Oryzias latipes ENSORLG00000009031 I 0.758
MCINX015565 Melitaea cinxia MCINX015565 I 0.756
PAX3 Sus scrofa ENSSSCG00000028418 I 0.754
pax3b Danio rerio ENSDARG00000028348 I 0.753
PHUM134580 Pediculus humanus PHUM134580 I 0.742
Hsal_04609--XP_394847.3_APIME Harpegnathos saltator Hsal_04609--XP_394847.3_APIME I 0.740
ISCW014979 Ixodes scapularis ISCW014979 I 0.736
TC015804 Tribolium castaneum TC015804 I 0.736
ACYPI002777 Acyrthosiphon pisum ACYPI002777 I 0.732
CapteG44697 Capitella teleta CapteG44697 I 0.731
Gfo_R008876 Geospiza fortis Gfo_R008876 I 0.725
Afo_R000224 Aptenodytes forsteri Afo_R000224 I 0.725
CLEC002253 Cimex lectularius CLEC002253 I 0.720
GB54180 Apis mellifera GB54180 I 0.720
Hsal_08388--XP_394847.3_APIME Harpegnathos saltator Hsal_08388--XP_394847.3_APIME I 0.715
LLOJ009941 Lutzomyia longipalpis LLOJ009941 I 0.714
PPAI006228 Phlebotomus papatasi PPAI006228 I 0.714
Cflo_06472--XP_394847.3_APIME Camponotus floridanus Cflo_06472--XP_394847.3_APIME I 0.710
ENSGALG00000005246 Gallus gallus ENSGALG00000005246 I 0.710
ASTEI06723 Anopheles stephensi ASTEI06723 I 0.709
Cflo_07008--XP_394847.3_APIME Camponotus floridanus Cflo_07008--XP_394847.3_APIME I 0.709
ACYPI004907 Acyrthosiphon pisum ACYPI004907 I 0.704
SINV13311 Solenopsis invicta SINV13311 I 0.703
NV18360 Nasonia vitripennis NV18360 I 0.703
tetur29g00530 Tetranychus urticae tetur29g00530 I 0.703
BGIBMGA009025 Bombyx mori BGIBMGA009025 I 0.702