ENSAPLG00000014579 (Anas platyrhynchos)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSAPLG00000014579 T237273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX2
M03294_2.00
Homo sapiens
SGTCACGCWTSRNTGVNY

RNBCANYSAWGCGTGACS
SELEX
Jolma et al.(2013)
PAX2_1
0.979 0.979
PAX2
M05428_2.00
Homo sapiens
NSGYYACGCNYSRNYRVNBN

NVNBYRNYSRNGCGTRRCSN
SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX
0.979 0.979
PAX2
M10808_2.00
Homo sapiens
NNHNRTYAHKBRHDMBBNN

NNVVKHDYVMDWRAYNDNN
Transfac
Matys et al.(2006)
V$PAX2_01
0.979 0.979
PAX2
M10809_2.00
Homo sapiens
NDSTTTNNN

NNNAAASHN
Transfac
Matys et al.(2006)
V$PAX2_02
0.979 0.979
PAX2
M10810_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX2_Q2
0.979 0.979
PAX2
M05429_2.00
Homo sapiens
NSGTCACGCWTSANYGVNYN

NRNBCRNTSAWGCGTGACSN
SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX
0.979 0.979
Pax2
M02690_2.00
Mus musculus
NRTCAYKB

VMRTGAYN
SELEX
Mathelier et al.(2014)
MA0067.1
0.971 0.971
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000014485 Paired box 16 124
ENSAPLP00000014485 Homeodomain 213 243

Links

Other Homeodomain,Paired box family TFs
Other Anas platyrhynchos TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
CMQ_3662 Grosmannia clavigera CMQ_3662 N 0.000
Cob_09197 Colletotrichum orbiculare Cob_09197 N 0.000
DRE_00038 Drechslerella stenobrocha DRE_00038 N 0.000
GGTG_00134 Gaeumannomyces graminis GGTG_00134 N 0.000
GGTG_13354 Gaeumannomyces graminis GGTG_13354 N 0.000
H072_303 Dactylellina haptotyla H072_303 N 0.000
HMPREF1541_00702 Cyphellophora europaea HMPREF1541_00702 N 0.000
MAPG_05686 Magnaporthe poae MAPG_05686 N 0.000
MGG_00587 Magnaporthe oryzae MGG_00587 N 0.000
OCS_01259 Ophiocordyceps sinensis OCS_01259 N 0.000
PFICI_10257 Pestalotiopsis fici PFICI_10257 N 0.000
S40285_06361 Stachybotrys chlorohalonata S40285_06361 N 0.000
S40288_03619 Stachybotrys chartarum S40288_03619 N 0.000
TRIATDRAFT_298410 Trichoderma atroviride TRIATDRAFT_298410 N 0.000
TRIREDRAFT_65315 Trichoderma reesei TRIREDRAFT_65315 N 0.000
TRIVIDRAFT_208681 Trichoderma virens TRIVIDRAFT_208681 N 0.000
UCREL1_10834 Eutypa lata UCREL1_10834 N 0.000
UCRPA7_5196 Togninia minima UCRPA7_5196 N 0.000