ENSAPLG00000014579 (Anas platyrhynchos)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSAPLG00000014579 T237273_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX2
M03294_2.00
Homo sapiens
SGTCACGCWTSRNTGVNY

RNBCANYSAWGCGTGACS
SELEX
Jolma et al.(2013)
PAX2_1
0.979 0.979
PAX2
M05428_2.00
Homo sapiens
NSGYYACGCNYSRNYRVNBN

NVNBYRNYSRNGCGTRRCSN
SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX
0.979 0.979
PAX2
M10808_2.00
Homo sapiens
NNHNRTYAHKBRHDMBBNN

NNVVKHDYVMDWRAYNDNN
Transfac
Matys et al.(2006)
V$PAX2_01
0.979 0.979
PAX2
M10809_2.00
Homo sapiens
NDSTTTNNN

NNNAAASHN
Transfac
Matys et al.(2006)
V$PAX2_02
0.979 0.979
PAX2
M10810_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX2_Q2
0.979 0.979
PAX2
M05429_2.00
Homo sapiens
NSGTCACGCWTSANYGVNYN

NRNBCRNTSAWGCGTGACSN
SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX
0.979 0.979
Pax2
M02690_2.00
Mus musculus
NRTCAYKB

VMRTGAYN
SELEX
Mathelier et al.(2014)
MA0067.1
0.971 0.971
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAPLP00000014485 Paired box 16 124
ENSAPLP00000014485 Homeodomain 213 243

Links

Other Homeodomain,Paired box family TFs
Other Anas platyrhynchos TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I 0.878
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I 0.878
PAX2 Bos taurus ENSBTAG00000021566 I 0.878
PAX2 Callithrix jacchus ENSCJAG00000017397 I 0.878
PAX2 Canis familiaris ENSCAFG00000009709 I 0.878
PAX2 Cavia porcellus ENSCPOG00000000939 I 0.878
ENSCSAG00000005568 Chlorocebus sabaeus ENSCSAG00000005568 I 0.968
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I 0.878
Pax2 Dipodomys ordii ENSDORG00000006193 I 0.863
PAX2 Echinops telfairi ENSETEG00000014765 I 0.859
PAX2 Equus caballus ENSECAG00000021123 I 0.878
PAX2 Erinaceus europaeus ENSEEUG00000001995 I 0.878
PAX2 Felis catus ENSFCAG00000011602 I 0.878
ENSFALG00000007308 Ficedula albicollis ENSFALG00000007308 I 0.885
Gfo_R002455 Geospiza fortis Gfo_R002455 I 0.891
PAX2 Gorilla gorilla ENSGGOG00000014908 I 0.878
PAX2 Homo sapiens ENSG00000075891 D 0.878
ENSSTOG00000011575 Ictidomys tridecemlineatus ENSSTOG00000011575 I 0.968
ENSLACG00000017470 Latimeria chalumnae ENSLACG00000017470 I 0.832
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.900
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.878
ENSP00000359319 Macaca fascicularis ENSP00000359319 I 0.878
PAX2 Macaca mulatta ENSMMUG00000009163 I 0.878
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I 0.885
PAX2 Microcebus murinus ENSMICG00000001357 I 0.878
PAX2 Monodelphis domestica ENSMODG00000019353 I 0.885
ENSMPUG00000016955 Mustela putorius furo ENSMPUG00000016955 I 0.872
Pax2 Mus musculus ENSMUSG00000004231 D 0.878
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I 0.878
PAX2 Myotis lucifugus ENSMLUG00000015106 I 0.957
PAX2 Ochotona princeps ENSOPRG00000007096 I 0.878
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I 0.878
PAX2 Otolemur garnettii ENSOGAG00000015274 I 0.878
PAX2 Pan troglodytes ENSPTRG00000002853 I 0.878
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I 0.878
Pvit_13858 Pogona vitticeps Pvit_13858 I 0.878
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I 0.878
PAX2 Procavia capensis ENSPCAG00000006623 I 0.878
PAX2 Pteropus vampyrus ENSPVAG00000002148 I 0.878
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.872
Sakowv30045649m.g Saccoglossus kowalevskii Sakowv30045649m.g I 0.786
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I 0.885
PAX2 Sus scrofa ENSSSCG00000010556 I 0.878
PAX2 Taeniopygia guttata ENSTGUG00000007620 I 0.891
PAX2 Tursiops truncatus ENSTTRG00000015106 I 0.878
CAA04222 Xenopus laevis CAA04222 I 0.833
CAA71206 Xenopus laevis CAA71206 I 0.859
pax2.L Xenopus laevis XB-GENE-486805 I 0.936