PAX7 (Bos taurus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSBTAG00000014967 T237277_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Pax7
M00541_2.00
Mus musculus
NNVATTWN

NWAATBNN
PBM
Berger et al.(2008)
Pax7_3783
1.000 1.000
PAX7
M03292_2.00
Homo sapiens
WAATYRATTA

TAATYRATTW
SELEX
Jolma et al.(2013)
PAX7_1
1.000 1.000
PAX7
M03293_2.00
Homo sapiens
TAATYGATTA

TAATCRATTA
SELEX
Jolma et al.(2013)
PAX7_2
1.000 1.000
PAX7
M05416_2.00
Homo sapiens
NDSCGTGACGAATYR

YRATTCGTCACGSHN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1
1.000 1.000
PAX7
M05417_2.00
Homo sapiens
NSGTCACGSHWRTTAN

NTAAYWDSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2
1.000 1.000
PAX7
M05418_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3
1.000 1.000
PAX7
M05422_2.00
Homo sapiens
BVATTMGTCACGSHN

NDSCGTGACKAATBV
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1
1.000 1.000
PAX7
M05423_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2
1.000 1.000
PAX7
M05424_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3
1.000 1.000
PAX7
M05874_2.00
Homo sapiens
ATTMGTYACGSHN

NDSCGTRACKAAT
SMiLE-seq
Isakova et al.(2017)
PAX7
1.000 1.000
Pax7
M09586_2.00
Mus musculus
NNNNNYAATTDNNHAATTAN

NTAATTDNNHAATTRNNNNN
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1
1.000 1.000
Pax7
M09587_2.00
Mus musculus
DTAATYDGATTA

TAATCHRATTAH
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2
1.000 1.000
Pax7
M09588_2.00
Mus musculus
TAATTGATTW

WAATCAATTA
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3
1.000 1.000
PAX7
M05419_2.00
Homo sapiens
NVATTVGTCRCGSYN

NRSCGYGACBAATBN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1
1.000 1.000
PAX7
M05420_2.00
Homo sapiens
NNGTCACGSHHRTTAN

NTAAYDDSCGTGACNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2
1.000 1.000
PAX7
M05421_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3
1.000 1.000
PAX7
M05425_2.00
Homo sapiens
YRATTMGTCACGSHN

NDSCGTGACKAATYR
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1
1.000 1.000
PAX7
M05426_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2
1.000 1.000
PAX7
M05427_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3
1.000 1.000
PAX3
M00358_2.00
Homo sapiens
NRTNNNN

NNNNAYN
PBM
Barrera et al.(2016)
PAX3_REF
0.951 0.951
PAX3
M03297_2.00
Homo sapiens
TAATYRATTA

TAATYRATTA
SELEX
Jolma et al.(2013)
PAX3_1
0.951 0.951
PAX3
M03885_2.00
Homo sapiens
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
PAX3_1
0.951 0.951
PAX3
M03886_2.00
Homo sapiens
RATTMGTCACGST

ASCGTGACKAATY
SELEX
Nitta et al.(2015)
PAX3_2
0.951 0.951
PAX3
M05438_2.00
Homo sapiens
NSGTCACGSHHATTAN

NTAATDDSCGTGACSN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1
0.951 0.951
PAX3
M05439_2.00
Homo sapiens
NDAATCRATTMN

NKAATYGATTHN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2
0.951 0.951
PAX3
M05440_2.00
Homo sapiens
NBRATTMGTCACGSHN

NDSCGTGACKAATYVN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3
0.951 0.951
PAX3
M09585_2.00
Homo sapiens
WSYRTGACWAATBNN

NNVATTWGTCAYRSW
Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063
0.951 0.951
PAX3
M10816_2.00
Homo sapiens
TCGTCACRCHYHM

KDRDGYGTGACGA
Transfac
Matys et al.(2006)
V$PAX3_01
0.951 0.951
PAX3
M10817_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX3_B
0.951 0.951
PAX3
M05441_2.00
Homo sapiens
NNGTCACGSHWRTTAN

NTAAYWDSCGTGACNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1
0.951 0.951
PAX3
M05442_2.00
Homo sapiens
NWAATCRATTAN

NTAATYGATTWN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2
0.951 0.951
PAX3
M05443_2.00
Homo sapiens
NNRATTVGTCRCGSHN

NDSCGYGACBAATYNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3
0.951 0.951
PAX3
M00352_2.00
Homo sapiens
VNTAATYR

YRATTANB
PBM
Barrera et al.(2016)
PAX3_G48R
0.945 0.945
PAX3
M00353_2.00
Homo sapiens
NNNNRTNNN

NNNAYNNNN
PBM
Barrera et al.(2016)
PAX3_N47H
0.945 0.945
PAX3
M00354_2.00
Homo sapiens
NNNRYNN

NNRYNNN
PBM
Barrera et al.(2016)
PAX3_N47K
0.945 0.945
PAX3
M00355_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_P50L
0.945 0.945
PAX3
M00356_2.00
Homo sapiens
NNKWCAYDDWN

NWHHRTGWMNN
PBM
Barrera et al.(2016)
PAX3_R270C
0.945 0.945
PAX3
M00357_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_R56L
0.945 0.945
PAX3
M00359_2.00
Homo sapiens
NTAATYRV

BYRATTAN
PBM
Barrera et al.(2016)
PAX3_Y90H
0.945 0.945
prd
M03894_2.00
Drosophila melanogaster
VATTVGTCACGS

SCGTGACBAATB
SELEX
Nitta et al.(2015)
prd_1
0.824 0.824
prd
M03895_2.00
Drosophila melanogaster
NRATCRATYN

NRATYGATYN
SELEX
Nitta et al.(2015)
prd_2
0.824 0.824
prd
M06555_2.00
Drosophila melanogaster
HSWAACNGH

DCNGTTWSD
B1H
Mathelier et al.(2014)
MA0239.1
0.824 0.824
prd
M09684_2.00
Drosophila melanogaster
HMVNTHHKWMACGS

SCGTKWMDDANBKD
Misc
Kulakovskiy et al.(2009)
prd
0.824 0.824
prd
M10818_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$PRD_Q6
0.824 0.824
gsb-n
M03888_2.00
Drosophila melanogaster
SCGTRWCKAATB

VATTMGWYACGS
SELEX
Nitta et al.(2015)
gsb-n_1
0.780 0.780
gsb
M03889_2.00
Drosophila melanogaster
RATTMGTCACGSN

NSCGTGACKAATY
SELEX
Nitta et al.(2015)
gsb_1
0.775 0.775
gsb
M03890_2.00
Drosophila melanogaster
NNNAATCRATTWNN

NNWAATYGATTNNN
SELEX
Nitta et al.(2015)
gsb_2
0.775 0.775
gsb
M03891_2.00
Drosophila melanogaster
RTBDMTAATTGATTD

HAATCAATTAKHVAY
SELEX
Nitta et al.(2015)
gsb_3
0.775 0.775
gsb
M03892_2.00
Drosophila melanogaster
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
gsb_4
0.775 0.775
gsb
M03893_2.00
Drosophila melanogaster
NSCGTGACKAATBV

BVATTMGTCACGSN
SELEX
Nitta et al.(2015)
gsb_5
0.775 0.775
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000019924 Paired box 34 161
ENSBTAP00000019924 Homeodomain 218 274

Links

Other Homeodomain,Paired box family TFs
Other Bos taurus TFs

235 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACAC_0000752101 Angiostrongylus cantonensis ACAC_0000752101 I 0.000
ACOC_0000580401 Angiostrongylus costaricensis ACOC_0000580401 I 0.000
ALUE_0001545901 Ascaris lumbricoides ALUE_0001545901 I 0.000
ANCCAN_00554 Ancylostoma caninum ANCCAN_00554 I 0.000
ANCCEY_12899 Ancylostoma ceylanicum ANCCEY_12899 I 0.000
ASIM_0001333801 Anisakis simplex ASIM_0001333801 I 0.000
ASU_04064 Ascaris suum ASU_04064 I 0.000
Bm4254 Brugia malayi Bm4254 I 0.000
BXY_0772600 Bursaphelenchus xylophilus BXY_0772600 I 0.000
CBG13548 Caenorhabditis briggsae CBG13548 I 0.000
CBG13549 Caenorhabditis briggsae CBG13549 D 0.000
CBN10937 Caenorhabditis brenneri CBN10937 I 0.000
CJA11149 Caenorhabditis japonica CJA11149 I 0.000
CJA18864 Caenorhabditis japonica CJA18864 I 0.000
CRE31380 Caenorhabditis remanei CRE31380 I 0.000
CRE31381 Caenorhabditis remanei CRE31381 I 0.000
DICVIV_08848 Dictyocaulus viviparus DICVIV_08848 I 0.000
egl-18 Caenorhabditis elegans WBGene00001186 I 0.000
elt-6 Caenorhabditis elegans WBGene00001253 D 0.000
EVEC_0001284001 Enterobius vermicularis EVEC_0001284001 I 0.000
GPLIN_000855200 Globodera pallida GPLIN_000855200 I 0.000
Hba_15007 Heterorhabditis bacteriophora Hba_15007 I 0.000
HCOI01886300 Haemonchus contortus HCOI01886300 I 0.000
L596_g25881 Steinernema carpocapsae L596_g25881 I 0.000
L889_g31947 Steinernema feltiae L889_g31947 I 0.000
L892_g6412 Steinernema scapterisci L892_g6412 I 0.000
L893_g28710 Steinernema glaseri L893_g28710 I 0.000
L898_g8209 Steinernema monticolum L898_g8209 I 0.000
LOAG_07460 Loa loa LOAG_07460 I 0.000
maker-nMf.1.1.scaf08707-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf08707-augustus-gene-0.3 I 0.000
Minc08374 Meloidogyne incognita Minc08374 I 0.000
nAv.1.0.1.g03924 Acanthocheilonema viteae nAv.1.0.1.g03924 I 0.000
NBR_0001940901 Nippostrongylus brasiliensis NBR_0001940901 I 0.000
nDi.2.2.2.g02293 Dirofilaria immitis nDi.2.2.2.g02293 I 0.000
NECAME_05031 Necator americanus NECAME_05031 I 0.000
nLs.2.1.2.g04395 Litomosoides sigmodontis nLs.2.1.2.g04395 I 0.000
nOo.2.0.1.g08948 Onchocerca ochengi nOo.2.0.1.g08948 I 0.000
nRc.2.0.1.g15145 Romanomermis culicivorax nRc.2.0.1.g15145 I 0.000
OESDEN_09249 Oesophagostomum dentatum OESDEN_09249 I 0.000
OFLC_0000492601 Onchocerca flexuosa OFLC_0000492601 I 0.000
PTRK_0001379700 Parastrongyloides trichosuri PTRK_0001379700 I 0.000
RSKR_0000556500 Rhabditophanes kr3021 RSKR_0000556500 I 0.000
SBAD_0000818101 Soboliphyme baturini SBAD_0000818101 I 0.000
scaffold1024-EXSNAP2012.4 Pristionchus exspectatus scaffold1024-EXSNAP2012.4 I 0.000
scaffold1033-EXSNAP2012.2 Pristionchus exspectatus scaffold1033-EXSNAP2012.2 I 0.000
SMUV_0001093901 Syphacia muris SMUV_0001093901 I 0.000
SPAL_0001590300 Strongyloides papillosus SPAL_0001590300 I 0.000
SSTP_0001171300 Strongyloides stercoralis SSTP_0001171300 I 0.000
SVE_0995400 Strongyloides venezuelensis SVE_0995400 I 0.000
TCLT_0000574501 Thelazia callipaeda TCLT_0000574501 I 0.000
WBGene00241875 Onchocerca volvulus WBGene00241875 I 0.000
WUBG_10387 Wuchereria bancrofti WUBG_10387 I 0.000