CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000005568
(
Chlorocebus sabaeus
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSCSAG00000005568
T237300_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX2
M03294_2.00
Homo sapiens
SGTCACGCWTSRNTGVNY
RNBCANYSAWGCGTGACS
SELEX
Jolma et al.(2013)
PAX2_1
1.000
1.000
PAX2
M05428_2.00
Homo sapiens
NSGYYACGCNYSRNYRVNBN
NVNBYRNYSRNGCGTRRCSN
SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX
1.000
1.000
Pax2
M02690_2.00
Mus musculus
NRTCAYKB
VMRTGAYN
SELEX
Mathelier et al.(2014)
MA0067.1
1.000
1.000
PAX2
M10808_2.00
Homo sapiens
NNHNRTYAHKBRHDMBBNN
NNVVKHDYVMDWRAYNDNN
Transfac
Matys et al.(2006)
V$PAX2_01
1.000
1.000
PAX2
M10809_2.00
Homo sapiens
NDSTTTNNN
NNNAAASHN
Transfac
Matys et al.(2006)
V$PAX2_02
1.000
1.000
PAX2
M10810_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX2_Q2
1.000
1.000
PAX2
M05429_2.00
Homo sapiens
NSGTCACGCWTSANYGVNYN
NRNBCRNTSAWGCGTGACSN
SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX
1.000
1.000
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000001878
Paired box
1
32
MFAWEIRDRLLAEGICDNDTVPSVSSINRIIR
ENSCSAP00000001878
Homeodomain
121
151
RADTFTQQQLEALDRVFERPSYPDVFQASEH
Links
Other
Homeodomain,Paired box
family TFs
Other
Chlorocebus sabaeus
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAX2
Ochotona princeps
ENSOPRG00000007096
I
1.000
ENSPANG00000021132
Papio anubis
ENSPANG00000021132
I
1.000
PAX2
Procavia capensis
ENSPCAG00000006623
I
1.000
ENSPPYG00000002572
Pongo abelii
ENSPPYG00000002572
I
1.000
PAX2
Otolemur garnettii
ENSOGAG00000015274
I
1.000
PAX2
Oryctolagus cuniculus
ENSOCUG00000012860
I
1.000
ENSAMEG00000017523
Ailuropoda melanoleuca
ENSAMEG00000017523
I
1.000
Pax2
Mus musculus
ENSMUSG00000004231
D
1.000
ENSOARG00000015552
Ovis aries
ENSOARG00000015552
I
1.000
PAX2
Pan troglodytes
ENSPTRG00000002853
I
1.000
PAX2
Pteropus vampyrus
ENSPVAG00000002148
I
1.000
ENSP00000359319
Macaca fascicularis
ENSP00000359319
I
1.000
Myotis_brandtii_PAX2_10025650
Myotis brandtii
Myotis_brandtii_PAX2_10025650
I
1.000
Pvit_13858
Pogona vitticeps
Pvit_13858
I
1.000
ENSP00000359319-D1
Bos grunniens
ENSP00000359319-D1
I
1.000
PAX2
Tursiops truncatus
ENSTTRG00000015106
I
1.000
Pax2
Rattus norvegicus
ENSRNOG00000014253
I
1.000
PAX2
Sus scrofa
ENSSSCG00000010556
I
1.000
ENSSTOG00000011575
Ictidomys tridecemlineatus
ENSSTOG00000011575
I
1.000
PAX2
Macaca mulatta
ENSMMUG00000009163
I
1.000
ENSMPUG00000016955
Mustela putorius furo
ENSMPUG00000016955
I
1.000
PAX2
Dasypus novemcinctus
ENSDNOG00000013328
I
1.000
Pax2
Dipodomys ordii
ENSDORG00000006193
I
1.000
PAX2
Erinaceus europaeus
ENSEEUG00000001995
I
1.000
PAX2
Cavia porcellus
ENSCPOG00000000939
I
1.000
PAX2
Callithrix jacchus
ENSCJAG00000017397
I
1.000
PAX2
Bos taurus
ENSBTAG00000021566
I
1.000
PAX2
Canis familiaris
ENSCAFG00000009709
I
1.000
PAX2
Felis catus
ENSFCAG00000011602
I
1.000
PAX2
Equus caballus
ENSECAG00000021123
I
1.000
PAX2
Microcebus murinus
ENSMICG00000001357
I
1.000
PAX2
Loxodonta africana
ENSLAFG00000002388
I
1.000
PAX2
Gorilla gorilla
ENSGGOG00000014908
I
1.000
PAX2
Homo sapiens
ENSG00000075891
D
1.000
ENSSHAG00000014328
Sarcophilus harrisii
ENSSHAG00000014328
I
0.984
ENSMEUG00000013247
Macropus eugenii
ENSMEUG00000013247
I
0.984
PAX2
Monodelphis domestica
ENSMODG00000019353
I
0.984
Gfo_R002455
Geospiza fortis
Gfo_R002455
I
0.968
ENSAPLG00000014579
Anas platyrhynchos
ENSAPLG00000014579
I
0.968
PAX2
Taeniopygia guttata
ENSTGUG00000007620
I
0.968
ENSFALG00000007308
Ficedula albicollis
ENSFALG00000007308
I
0.968
CAA71206
Xenopus laevis
CAA71206
I
0.952
pax2.L
Xenopus laevis
XB-GENE-486805
I
0.952
PAX2
Echinops telfairi
ENSETEG00000014765
I
0.952
PAX2
Myotis lucifugus
ENSMLUG00000015106
I
0.952
ENSLACG00000017470
Latimeria chalumnae
ENSLACG00000017470
I
0.921
CAA04222
Xenopus laevis
CAA04222
I
0.905
ENSLOCG00000012825
Lepisosteus oculatus
ENSLOCG00000012825
I
0.794