ENSCSAG00000005568 (Chlorocebus sabaeus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		ENSCSAG00000005568 T237300_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX2
M03294_2.00 		Homo sapiens
SGTCACGCWTSRNTGVNY
RNBCANYSAWGCGTGACS		 SELEX
Jolma et al.(2013)
PAX2_1 		1.000 1.000
PAX2
M05428_2.00 		Homo sapiens
NSGYYACGCNYSRNYRVNBN
NVNBYRNYSRNGCGTRRCSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX 		1.000 1.000
Pax2
M02690_2.00 		Mus musculus
NRTCAYKB
VMRTGAYN		 SELEX
Mathelier et al.(2014)
MA0067.1 		1.000 1.000
PAX2
M10808_2.00 		Homo sapiens
NNHNRTYAHKBRHDMBBNN
NNVVKHDYVMDWRAYNDNN		 Transfac
Matys et al.(2006)
V$PAX2_01 		1.000 1.000
PAX2
M10809_2.00 		Homo sapiens
NDSTTTNNN
NNNAAASHN		 Transfac
Matys et al.(2006)
V$PAX2_02 		1.000 1.000
PAX2
M10810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX2_Q2 		1.000 1.000
PAX2
M05429_2.00 		Homo sapiens
NSGTCACGCWTSANYGVNYN
NRNBCRNTSAWGCGTGACSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX 		1.000 1.000
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000001878 Paired box 1 32
ENSCSAP00000001878 Homeodomain 121 151

Links

Other Homeodomain,Paired box family TFs
Other Chlorocebus sabaeus TFs

Invalid Input OrderBy

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action