ENSCSAG00000010195 (Chlorocebus sabaeus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSCSAG00000010195 T237302_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX4
M00350_2.00
Homo sapiens
NNNATTAN

NTAATNNN
PBM
Barrera et al.(2016)
PAX4_REF
0.989 0.989
PAX4
M00351_2.00
Homo sapiens
NNNATTAN

NTAATNNN
PBM
Barrera et al.(2016)
PAX4_REF_R3
0.989 0.989
PAX4
M03295_2.00
Homo sapiens
HKAATTAR

YTAATTMD
SELEX
Jolma et al.(2013)
PAX4_1
0.989 0.989
PAX4
M03296_2.00
Homo sapiens
YKAATTAV

BTAATTMR
SELEX
Jolma et al.(2013)
PAX4_2
0.989 0.989
PAX4
M03883_2.00
Homo sapiens
SGTCACGCWTSRNTG

CANYSAWGCGTGACS
SELEX
Nitta et al.(2015)
PAX4_1
0.989 0.989
PAX4
M03884_2.00
Homo sapiens
NNAATTANYKAATDMV

BKHATTMRNTAATTNN
SELEX
Nitta et al.(2015)
PAX4_2
0.989 0.989
PAX4
M05430_2.00
Homo sapiens
NAATTANNNNNNVNTAATTN

NAATTANBNNNNNNTAATTN
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_1
0.989 0.989
PAX4
M05431_2.00
Homo sapiens
NRYTWYACGCWTSRNYRNNYV

BRNNYRNYSAWGCGTRWARYN
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_2
0.989 0.989
PAX4
M05432_2.00
Homo sapiens
NTYACGCWYSRNYKMVYN

NRBKMRNYSRWGCGTRAN
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_3
0.989 0.989
PAX4
M05433_2.00
Homo sapiens
WHACGSTMATTDR

YHAATKASCGTDW
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_4
0.989 0.989
PAX4
M10811_2.00
Homo sapiens
NVNBSNNYVCGCHTSAMBNCN

NGNVKTSADGCGBRNNSVNBN
Transfac
Matys et al.(2006)
V$PAX4_01
0.989 0.989
PAX4
M10812_2.00
Homo sapiens
NAHWAATTDVV

BBHAATTWDTN
Transfac
Matys et al.(2006)
V$PAX4_02
0.989 0.989
PAX4
M10813_2.00
Homo sapiens
NDNNHYCACCCB

VGGGTGRDNNHN
Transfac
Matys et al.(2006)
V$PAX4_03
0.989 0.989
PAX4
M10814_2.00
Homo sapiens
RRAAAWWRNNHHNVHHNVHVNNHHSAYHSB

VSDRTSDDNNBDBNDDBNDDNNYWWTTTYY
Transfac
Matys et al.(2006)
V$PAX4_04
0.989 0.989
PAX4
M10815_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX4_Q2
0.989 0.989
PAX4
M05434_2.00
Homo sapiens
NHATTANBTAATDN

NHATTAVNTAATDN
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_1
0.989 0.989
PAX4
M05435_2.00
Homo sapiens
VATTWYACGCWTSRNYDVNYN

NRNBHRNYSAWGCGTRWAATB
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_2
0.989 0.989
PAX4
M05436_2.00
Homo sapiens
HTYACGCWTSANYGMNYN

NRNKCRNTSAWGCGTRAD
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_3
0.989 0.989
PAX4
M05437_2.00
Homo sapiens
DHRYGCTAATTAN

NTAATTAGCRYDH
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_4
0.989 0.989
PAX4
M00347_2.00
Homo sapiens
NNNATND

HNATNNN
PBM
Barrera et al.(2016)
PAX4_R183C
0.983 0.983
PAX4
M00348_2.00
Homo sapiens
NNDATTAN

NTAATHNN
PBM
Barrera et al.(2016)
PAX4_R192H
0.983 0.983
PAX4
M00349_2.00
Homo sapiens
NNNATTANN

NNTAATNNN
PBM
Barrera et al.(2016)
PAX4_R192S
0.983 0.983
Pax4
M00542_2.00
Mus musculus
NNNATTAN

NTAATNNN
PBM
Berger et al.(2008)
Pax4_3989
0.933 0.933
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
0.702 0.702
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
0.702 0.702
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
0.702 0.702
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
0.702 0.702
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
0.702 0.702
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
0.702 0.702
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
0.702 0.702
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
0.702 0.702
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
0.702 0.702
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
0.702 0.702
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.702 0.702
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
0.702 0.702
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000006428 Paired box 1 121
ENSCSAP00000006428 Homeodomain 163 219

Links

Other Homeodomain,Paired box family TFs
Other Chlorocebus sabaeus TFs

81 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PAX4 Gorilla gorilla ENSGGOG00000002555 I 0.994
PAX4 Callithrix jacchus ENSCJAG00000017652 I 0.994
ENSNLEG00000012257 Nomascus leucogenys ENSNLEG00000012257 I 0.994
PAX4 Homo sapiens ENSG00000106331 D 0.989
PAX4 Pan troglodytes ENSPTRG00000019653 I 0.989
PAX4 Macaca mulatta ENSMMUG00000015429 I 0.973
ENSP00000368014 Macaca fascicularis ENSP00000368014 I 0.973
PAX4 Felis catus ENSFCAG00000005485 I 0.972
Myotis_brandtii_Pax4_10010526 Myotis brandtii Myotis_brandtii_Pax4_10010526 I 0.972
PAX4 Sus scrofa ENSSSCG00000016591 I 0.972
PAX4 Tursiops truncatus ENSTTRG00000006056 I 0.968
ENSPPYG00000017971 Pongo abelii ENSPPYG00000017971 I 0.967
ENSBTAP00000042667-D1 Bos grunniens ENSBTAP00000042667-D1 I 0.966
PAX4 Oryctolagus cuniculus ENSOCUG00000001612 I 0.966
PAX4 Canis familiaris ENSCAFG00000001719 I 0.962
PAX4 Procavia capensis ENSPCAG00000016257 I 0.956
PAX4 Microcebus murinus ENSMICG00000000095 I 0.956
ENSOARG00000001951 Ovis aries ENSOARG00000001951 I 0.956
ENSAMEG00000004648 Ailuropoda melanoleuca ENSAMEG00000004648 I 0.956
PAX4 Erinaceus europaeus ENSEEUG00000009616 I 0.955
ENSSTOG00000002127 Ictidomys tridecemlineatus ENSSTOG00000002127 I 0.955
PAX4 Equus caballus ENSECAG00000008343 I 0.951
PAX4 Cavia porcellus ENSCPOG00000006244 I 0.949
PAX4 Bos taurus ENSBTAG00000000410 I 0.945
ENSMPUG00000006575 Mustela putorius furo ENSMPUG00000006575 I 0.945
PAX4 Pteropus vampyrus ENSPVAG00000013944 I 0.945
PAX4 Otolemur garnettii ENSOGAG00000013348 I 0.945
Pax4 Mus musculus ENSMUSG00000029706 D 0.933
PAX4 Loxodonta africana ENSLAFG00000005297 I 0.927
Pax4 Rattus norvegicus ENSRNOG00000008020 I 0.923
Pax4 Dipodomys ordii ENSDORG00000000332 I 0.921
PAX4 Ochotona princeps ENSOPRG00000013381 I 0.916
PAX4 Sorex araneus ENSSARG00000004842 I 0.895
ENSDNOG00000030639 Dasypus novemcinctus ENSDNOG00000030639 I 0.865
ENSSHAG00000015143 Sarcophilus harrisii ENSSHAG00000015143 I 0.860
PAX4 Choloepus hoffmanni ENSCHOG00000009265 I 0.837
PAX4 Myotis lucifugus ENSMLUG00000030302 I 0.826
PAX4 Ornithorhynchus anatinus ENSOANG00000000819 I 0.811
Afo_R008534 Aptenodytes forsteri Afo_R008534 I 0.764
Alligator_sinensis_CCG000926.1 Alligator sinensis Alligator_sinensis_CCG000926.1 I 0.724
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.708
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.708
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.708
pax6b Oryzias latipes ENSORLG00000009913 I 0.708
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.708
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.702
pax6b Takifugu rubripes ENSTRUG00000006935 I 0.702
ENSLOCG00000004578 Lepisosteus oculatus ENSLOCG00000004578 I 0.702
PAX6 Tupaia belangeri ENSTBEG00000004748 I 0.702
ENSSTOG00000003211 Ictidomys tridecemlineatus ENSSTOG00000003211 I 0.702
PAX6 Callithrix jacchus ENSCJAG00000005942 I 0.702
PAX6 Microcebus murinus ENSMICG00000004089 I 0.702
ENSLACG00000015337 Latimeria chalumnae ENSLACG00000015337 I 0.702
ENSGMOG00000012304 Gadus morhua ENSGMOG00000012304 I 0.702
PAX6 Gallus gallus ENSGALG00000012123 I 0.702
Pvit_09512 Pogona vitticeps Pvit_09512 I 0.702
pax6 Xenopus tropicalis XB-GENE-484088 I 0.702
PAX6 Bos taurus ENSBTAG00000004561 I 0.702
Alligator_sinensis_CCG012954.1 Alligator sinensis Alligator_sinensis_CCG012954.1 I 0.702
PAX6 Sus scrofa ENSSSCG00000013320 I 0.702
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.702
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.702
ENSSHAG00000016310 Sarcophilus harrisii ENSSHAG00000016310 I 0.702
ENSPANG00000005448 Papio anubis ENSPANG00000005448 I 0.702
PAX6 Procavia capensis ENSPCAG00000005165 I 0.702
pax6b Danio rerio ENSDARG00000045936 I 0.702
PAX6 Homo sapiens ENSG00000007372 D 0.702
ENSOARG00000016191 Ovis aries ENSOARG00000016191 I 0.702
ENSONIG00000004074 Oreochromis niloticus ENSONIG00000004074 I 0.702
pax6a Danio rerio ENSDARG00000103379 I 0.702
PAX6 Ochotona princeps ENSOPRG00000001678 I 0.702
PAX6 Anolis carolinensis ENSACAG00000002252 I 0.702
ENSCSAG00000005253 Chlorocebus sabaeus ENSCSAG00000005253 I 0.702
ENSMPUG00000011295 Mustela putorius furo ENSMPUG00000011295 I 0.702
PAX6 Macaca mulatta ENSMMUG00000016810 I 0.702
PAX6 Myotis lucifugus ENSMLUG00000006517 I 0.702
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.702
Pax6 Mus musculus ENSMUSG00000027168 D 0.702
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.702
PAX6 Dasypus novemcinctus ENSDNOG00000000761 I 0.702
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.702