PAX7 (Equus caballus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		ENSECAG00000020207 T237321_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pax7
M00541_2.00 		Mus musculus
NNVATTWN
NWAATBNN		 PBM
Berger et al.(2008)
Pax7_3783 		0.813 0.813
PAX7
M03292_2.00 		Homo sapiens
WAATYRATTA
TAATYRATTW		 SELEX
Jolma et al.(2013)
PAX7_1 		0.813 0.813
PAX7
M03293_2.00 		Homo sapiens
TAATYGATTA
TAATCRATTA		 SELEX
Jolma et al.(2013)
PAX7_2 		0.813 0.813
PAX7
M05416_2.00 		Homo sapiens
NDSCGTGACGAATYR
YRATTCGTCACGSHN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1 		0.813 0.813
PAX7
M05417_2.00 		Homo sapiens
NSGTCACGSHWRTTAN
NTAAYWDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2 		0.813 0.813
PAX7
M05418_2.00 		Homo sapiens
NNAATCRATTWN
NWAATYGATTNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3 		0.813 0.813
PAX7
M05422_2.00 		Homo sapiens
BVATTMGTCACGSHN
NDSCGTGACKAATBV		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1 		0.813 0.813
PAX7
M05423_2.00 		Homo sapiens
NSGTCACGSYWATTAN
NTAATWRSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2 		0.813 0.813
PAX7
M05424_2.00 		Homo sapiens
NTAATYGATTAN
NTAATCRATTAN		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3 		0.813 0.813
PAX7
M05874_2.00 		Homo sapiens
ATTMGTYACGSHN
NDSCGTRACKAAT		 SMiLE-seq
Isakova et al.(2017)
PAX7 		0.813 0.813
Pax7
M09586_2.00 		Mus musculus
NNNNNYAATTDNNHAATTAN
NTAATTDNNHAATTRNNNNN		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1 		0.813 0.813
Pax7
M09587_2.00 		Mus musculus
DTAATYDGATTA
TAATCHRATTAH		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2 		0.813 0.813
Pax7
M09588_2.00 		Mus musculus
TAATTGATTW
WAATCAATTA		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3 		0.813 0.813
PAX7
M05419_2.00 		Homo sapiens
NVATTVGTCRCGSYN
NRSCGYGACBAATBN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1 		0.813 0.813
PAX7
M05420_2.00 		Homo sapiens
NNGTCACGSHHRTTAN
NTAAYDDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2 		0.813 0.813
PAX7
M05421_2.00 		Homo sapiens
NNAATCRATTWN
NWAATYGATTNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3 		0.813 0.813
PAX7
M05425_2.00 		Homo sapiens
YRATTMGTCACGSHN
NDSCGTGACKAATYR		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1 		0.813 0.813
PAX7
M05426_2.00 		Homo sapiens
NSGTCACGSYWATTAN
NTAATWRSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2 		0.813 0.813
PAX7
M05427_2.00 		Homo sapiens
NTAATYGATTAN
NTAATCRATTAN		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3 		0.813 0.813
PAX3
M00358_2.00 		Homo sapiens
NRTNNNN
NNNNAYN		 PBM
Barrera et al.(2016)
PAX3_REF 		0.786 0.786
PAX3
M03297_2.00 		Homo sapiens
TAATYRATTA
TAATYRATTA		 SELEX
Jolma et al.(2013)
PAX3_1 		0.786 0.786
PAX3
M03885_2.00 		Homo sapiens
NNTAATYGATTANN
NNTAATCRATTANN		 SELEX
Nitta et al.(2015)
PAX3_1 		0.786 0.786
PAX3
M03886_2.00 		Homo sapiens
RATTMGTCACGST
ASCGTGACKAATY		 SELEX
Nitta et al.(2015)
PAX3_2 		0.786 0.786
PAX3
M05438_2.00 		Homo sapiens
NSGTCACGSHHATTAN
NTAATDDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1 		0.786 0.786
PAX3
M05439_2.00 		Homo sapiens
NDAATCRATTMN
NKAATYGATTHN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2 		0.786 0.786
PAX3
M05440_2.00 		Homo sapiens
NBRATTMGTCACGSHN
NDSCGTGACKAATYVN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3 		0.786 0.786
PAX3
M09585_2.00 		Homo sapiens
WSYRTGACWAATBNN
NNVATTWGTCAYRSW		 Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063 		0.786 0.786
PAX3
M10816_2.00 		Homo sapiens
TCGTCACRCHYHM
KDRDGYGTGACGA		 Transfac
Matys et al.(2006)
V$PAX3_01 		0.786 0.786
PAX3
M10817_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX3_B 		0.786 0.786
PAX3
M05441_2.00 		Homo sapiens
NNGTCACGSHWRTTAN
NTAAYWDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1 		0.786 0.786
PAX3
M05442_2.00 		Homo sapiens
NWAATCRATTAN
NTAATYGATTWN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2 		0.786 0.786
PAX3
M05443_2.00 		Homo sapiens
NNRATTVGTCRCGSHN
NDSCGYGACBAATYNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3 		0.786 0.786
PAX3
M00352_2.00 		Homo sapiens
VNTAATYR
YRATTANB		 PBM
Barrera et al.(2016)
PAX3_G48R 		0.780 0.780
PAX3
M00353_2.00 		Homo sapiens
NNNNRTNNN
NNNAYNNNN		 PBM
Barrera et al.(2016)
PAX3_N47H 		0.780 0.780
PAX3
M00354_2.00 		Homo sapiens
NNNRYNN
NNRYNNN		 PBM
Barrera et al.(2016)
PAX3_N47K 		0.780 0.780
PAX3
M00355_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_P50L 		0.780 0.780
PAX3
M00356_2.00 		Homo sapiens
NNKWCAYDDWN
NWHHRTGWMNN		 PBM
Barrera et al.(2016)
PAX3_R270C 		0.780 0.780
PAX3
M00357_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_R56L 		0.780 0.780
PAX3
M00359_2.00 		Homo sapiens
NTAATYRV
BYRATTAN		 PBM
Barrera et al.(2016)
PAX3_Y90H 		0.780 0.780
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000018061 Paired box 34 159
ENSECAP00000018061 Homeodomain 218 274

Links

Other Homeodomain,Paired box family TFs
Other Equus caballus TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAX7 Microcebus murinus ENSMICG00000016256 I 0.821
ENSSTOG00000020868 Ictidomys tridecemlineatus ENSSTOG00000020868 I 0.813
PAX7 Macaca mulatta ENSMMUG00000017444 I 0.813
PAX7 Dasypus novemcinctus ENSDNOG00000007584 I 0.813
ENSMPUG00000016202 Mustela putorius furo ENSMPUG00000016202 I 0.813
PAX7 Gorilla gorilla ENSGGOG00000004213 I 0.813
PAX7 Tursiops truncatus ENSTTRG00000004465 I 0.813
PAX7 Loxodonta africana ENSLAFG00000011762 I 0.813
ENSSHAG00000005424 Sarcophilus harrisii ENSSHAG00000005424 I 0.813
PAX7 Felis catus ENSFCAG00000008765 I 0.813
ENSGALG00000003782 Gallus gallus ENSGALG00000003782 I 0.813
ENSMEUG00000001822 Macropus eugenii ENSMEUG00000001822 I 0.813
PAX7 Meleagris gallopavo ENSMGAG00000005870 I 0.813
PAX7 Pan troglodytes ENSPTRG00000000253 I 0.813
PAX7 Homo sapiens ENSG00000009709 D 0.813
Pax7 Rattus norvegicus ENSRNOG00000018739 I 0.813
PAX7 Cavia porcellus ENSCPOG00000014574 I 0.813
Aan_R006049 Calypte anna Aan_R006049 I 0.813
PAX7 Bos taurus ENSBTAG00000014967 I 0.813
Pax7 Mus musculus ENSMUSG00000028736 D 0.813
ENSPPYG00000001801 Pongo abelii ENSPPYG00000001801 I 0.813
ENSNLEG00000007812 Nomascus leucogenys ENSNLEG00000007812 I 0.813
Pvit_06262 Pogona vitticeps Pvit_06262 I 0.813
ENSAMEG00000017082 Ailuropoda melanoleuca ENSAMEG00000017082 I 0.813
ENSP00000364524 Macaca fascicularis ENSP00000364524 I 0.813
PAX7 Canis familiaris ENSCAFG00000015539 I 0.813
PAX7 Otolemur garnettii ENSOGAG00000016376 I 0.813
PAX7 Callithrix jacchus ENSCJAG00000007521 I 0.813
Afo_R012987 Aptenodytes forsteri Afo_R012987 I 0.813
ENSBTAP00000019924-D1 Bos grunniens ENSBTAP00000019924-D1 I 0.813
pax7.L Xenopus laevis XB-GENE-865678 I 0.808
pax7 Xenopus tropicalis XB-GENE-487140 I 0.808
Myotis_brandtii_Pax7_10009014 Myotis brandtii Myotis_brandtii_Pax7_10009014 I 0.808
ENSCSAG00000000870 Chlorocebus sabaeus ENSCSAG00000000870 I 0.808
PAX7 Ochotona princeps ENSOPRG00000007352 I 0.802
ENSOARG00000010587 Ovis aries ENSOARG00000010587 I 0.802
ENSLACG00000019159 Latimeria chalumnae ENSLACG00000019159 I 0.802
ENSLOCG00000003864 Lepisosteus oculatus ENSLOCG00000003864 I 0.797
ENSPFOG00000013988 Poecilia formosa ENSPFOG00000013988 I 0.797
ENSGMOG00000001549 Gadus morhua ENSGMOG00000001549 I 0.797
pax7b Danio rerio ENSDARG00000070818 I 0.797
pax7a Takifugu rubripes ENSTRUG00000015245 I 0.797
ENSAMXG00000024811 Astyanax mexicanus ENSAMXG00000024811 I 0.797
pax7a Tetraodon nigroviridis ENSTNIG00000014797 I 0.797
ENSONIG00000014283 Oreochromis niloticus ENSONIG00000014283 I 0.797
PAX7 Gasterosteus aculeatus ENSGACG00000001703 I 0.797
PAX7 Oryzias latipes ENSORLG00000004269 I 0.797
PAX7 Sorex araneus ENSSARG00000008062 I 0.791
PAX3 Ornithorhynchus anatinus ENSOANG00000007096 I 0.791
pax7a Gasterosteus aculeatus ENSGACG00000012890 I 0.791
ENSAMXG00000003799 Astyanax mexicanus ENSAMXG00000003799 I 0.791
pax7a Danio rerio ENSDARG00000100398 I 0.791
ENSBTAP00000013131-D1 Bos grunniens ENSBTAP00000013131-D1 I 0.786
PAX3 Oryctolagus cuniculus ENSOCUG00000017507 I 0.786
Pvit_18803 Pogona vitticeps Pvit_18803 I 0.786
ENSP00000375921 Macaca fascicularis ENSP00000375921 I 0.786
ENSONIG00000001596 Oreochromis niloticus ENSONIG00000001596 I 0.786
ENSSTOG00000008650 Ictidomys tridecemlineatus ENSSTOG00000008650 I 0.786
PAX3 Pan troglodytes ENSPTRG00000012969 I 0.786
ENSPSIG00000005535 Pelodiscus sinensis ENSPSIG00000005535 I 0.786
ENSPANG00000008818 Papio anubis ENSPANG00000008818 I 0.786
Pax3 Rattus norvegicus ENSRNOG00000013670 I 0.786
ENSPPYG00000013219 Pongo abelii ENSPPYG00000013219 I 0.786
ENSSHAG00000016542 Sarcophilus harrisii ENSSHAG00000016542 I 0.786
PAX3 Tupaia belangeri ENSTBEG00000010268 I 0.786
PAX3 Otolemur garnettii ENSOGAG00000001304 I 0.786
ENSNLEG00000009611 Nomascus leucogenys ENSNLEG00000009611 I 0.786
ENSMEUG00000013628 Macropus eugenii ENSMEUG00000013628 I 0.786
PAX3 Anolis carolinensis ENSACAG00000004981 I 0.786
PAX3 Homo sapiens ENSG00000135903 D 0.786
PAX3 Loxodonta africana ENSLAFG00000008041 I 0.786
ENSLACG00000006342 Latimeria chalumnae ENSLACG00000006342 I 0.786
PAX3 Felis catus ENSFCAG00000018967 I 0.786
PAX3 Erinaceus europaeus ENSEEUG00000012346 I 0.786
PAX3 Gorilla gorilla ENSGGOG00000015636 I 0.786
PAX3 Equus caballus ENSECAG00000014549 I 0.786
PAX3 Microcebus murinus ENSMICG00000000336 I 0.786
ENSAMEG00000007444 Ailuropoda melanoleuca ENSAMEG00000007444 I 0.786
Pax3 Mus musculus ENSMUSG00000004872 I 0.786
PAX3 Cavia porcellus ENSCPOG00000006276 I 0.786
PAX3 Monodelphis domestica ENSMODG00000021190 I 0.786
ENSMPUG00000016673 Mustela putorius furo ENSMPUG00000016673 I 0.786
PAX3 Myotis lucifugus ENSMLUG00000014155 I 0.786
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.786
ENSCSAG00000007841 Chlorocebus sabaeus ENSCSAG00000007841 I 0.786
PAX3 Canis familiaris ENSCAFG00000016041 I 0.786
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.786
PAX3 Bos taurus ENSBTAG00000009950 I 0.786
ENSTSYG00000009638 Tarsius syrichta ENSTSYG00000009638 I 0.783
PAX3 Taeniopygia guttata ENSTGUG00000007761 I 0.780
pax3a Danio rerio ENSDARG00000010192 I 0.780
PAX3 Dasypus novemcinctus ENSDNOG00000001871 I 0.780
ENSFALG00000006722 Ficedula albicollis ENSFALG00000006722 I 0.780
ENSLOCG00000004189 Lepisosteus oculatus ENSLOCG00000004189 I 0.780
PAX3 Ochotona princeps ENSOPRG00000004223 I 0.775
ENSOARG00000020289 Ovis aries ENSOARG00000020289 I 0.775
fgenesh2_kg.scaffold_259000002 Branchiostoma floridae fgenesh2_kg.scaffold_259000002 I 0.769
fgenesh2_kg.scaffold_211000002 Branchiostoma floridae fgenesh2_kg.scaffold_211000002 I 0.769
ENSONIG00000010028 Oreochromis niloticus ENSONIG00000010028 I 0.769
PAX3 Tetraodon nigroviridis ENSTNIG00000014313 I 0.769
PAX3 Takifugu rubripes ENSTRUG00000009198 I 0.768
PAX3 Procavia capensis ENSPCAG00000000403 I 0.768
ENSPFOG00000007769 Poecilia formosa ENSPFOG00000007769 I 0.764
ENSPFOG00000014283 Poecilia formosa ENSPFOG00000014283 I 0.764
ENSXMAG00000015270 Xiphophorus maculatus ENSXMAG00000015270 I 0.764
pax3.S Xenopus laevis XB-GENE-482744 I 0.764
ENSXMAG00000008304 Xiphophorus maculatus ENSXMAG00000008304 I 0.764
ENSVPAG00000012251 Vicugna pacos ENSVPAG00000012251 I 0.763
PAX7 Choloepus hoffmanni ENSCHOG00000005130 I 0.763
pax3.L Xenopus laevis XB-GENE-6252072 I 0.760
ENSGMOG00000006159 Gadus morhua ENSGMOG00000006159 I 0.758
ENSONIG00000014632 Oreochromis niloticus ENSONIG00000014632 I 0.758
PAX3 Tursiops truncatus ENSTTRG00000000379 I 0.758
PAX3 Takifugu rubripes ENSTRUG00000013444 I 0.758
PAX3 Echinops telfairi ENSETEG00000006800 I 0.758
PAX3 Tetraodon nigroviridis ENSTNIG00000015279 I 0.753
CGI_10026438 Crassostrea gigas CGI_10026438 I 0.747
pax3b Gasterosteus aculeatus ENSGACG00000014017 I 0.747
PAX3 Oryzias latipes ENSORLG00000015932 I 0.747
PAX3 Oryzias latipes ENSORLG00000009031 I 0.747
ENSXMAG00000012884 Xiphophorus maculatus ENSXMAG00000012884 I 0.742
ENSPFOG00000016934 Poecilia formosa ENSPFOG00000016934 I 0.731
Gfo_R008876 Geospiza fortis Gfo_R008876 I 0.725
pax3b Danio rerio ENSDARG00000028348 I 0.725
Afo_R000224 Aptenodytes forsteri Afo_R000224 I 0.725
PAX3 Sus scrofa ENSSSCG00000028418 I 0.725
ENSCSAVG00000004794 Ciona savignyi ENSCSAVG00000004794 I 0.720
PHUM134580 Pediculus humanus PHUM134580 I 0.720
ISCW014979 Ixodes scapularis ISCW014979 I 0.720
Myotis_brandtii_Pax3_10032963 Myotis brandtii Myotis_brandtii_Pax3_10032963 I 0.720
CapteG44697 Capitella teleta CapteG44697 I 0.714
TC015804 Tribolium castaneum TC015804 I 0.714
CLEC002253 Cimex lectularius CLEC002253 I 0.714
ENSCING00000005904 Ciona intestinalis ENSCING00000005904 I 0.714
ENSGALG00000005246 Gallus gallus ENSGALG00000005246 I 0.710
LLOJ009941 Lutzomyia longipalpis LLOJ009941 I 0.709
PPAI006228 Phlebotomus papatasi PPAI006228 I 0.709
GB54180 Apis mellifera GB54180 I 0.709
Cflo_07008--XP_394847.3_APIME Camponotus floridanus Cflo_07008--XP_394847.3_APIME I 0.703
ACYPI002777 Acyrthosiphon pisum ACYPI002777 I 0.703