PAX6 (Macaca mulatta)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSMMUG00000016810 T237394_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
1.000 1.000
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
1.000 1.000
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
1.000 1.000
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
1.000 1.000
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
1.000 1.000
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
1.000 1.000
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
1.000 1.000
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
1.000 1.000
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
1.000 1.000
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
1.000 1.000
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
1.000 1.000
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
1.000 1.000
PAX6
M00335_2.00
Homo sapiens
BRNNNNNN

NNNNNNYV
PBM
Barrera et al.(2016)
PAX6_A79E
0.995 0.995
PAX6
M00336_2.00
Homo sapiens
RTGCACAC

GTGTGCAY
PBM
Barrera et al.(2016)
PAX6_F258S
0.995 0.995
PAX6
M00337_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
PAX6_P118R
0.995 0.995
PAX6
M00338_2.00
Homo sapiens
WSGVRVDR

YHBYBCSW
PBM
Barrera et al.(2016)
PAX6_P68S
0.995 0.995
PAX6
M00339_2.00
Homo sapiens
NNNNSGKVGGHNN

NNDCCBMCSNNNN
PBM
Barrera et al.(2016)
PAX6_R128C
0.995 0.995
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.995 0.995
PAX6
M00341_2.00
Homo sapiens
BTSCCCSGSC

GSCSGGGSAV
PBM
Barrera et al.(2016)
PAX6_R26G
0.995 0.995
PAX6
M00343_2.00
Homo sapiens
NNNNCCCVKCNBN

NVNGMBGGGNNNN
PBM
Barrera et al.(2016)
PAX6_S119R
0.995 0.995
PAX6
M00344_2.00
Homo sapiens
NNMSASGBYNNN

NNNRVCSTSKNN
PBM
Barrera et al.(2016)
PAX6_V126D
0.995 0.995
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD

HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.934 0.934
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD

HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.934 0.934
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN

NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.934 0.934
toy
M03899_2.00
Drosophila melanogaster
TTYACGCWTGASTGMACAN

NTGTKCASTCAWGCGTRAA
SELEX
Nitta et al.(2015)
toy_1
0.907 0.907
toy
M03900_2.00
Drosophila melanogaster
NTYACGCWTSAVTGMRCNN

NNGYKCABTSAWGCGTRAN
SELEX
Nitta et al.(2015)
toy_2
0.907 0.907
toy
M03901_2.00
Drosophila melanogaster
VATTANBHAYGSWYSRN

NYSRWSCRTDVNTAATB
SELEX
Nitta et al.(2015)
toy_3
0.907 0.907
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000022101 Paired box 4 142
ENSMMUP00000022101 Homeodomain 225 281
ENSMMUP00000022107 Paired box 4 128
ENSMMUP00000022107 Homeodomain 211 267

Links

Other Homeodomain,Paired box family TFs
Other Macaca mulatta TFs

237 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Kwal_17681 Kluyveromyces waltii Kwal_17681 N 0.000
TRIATDRAFT_238142 Trichoderma atroviride TRIATDRAFT_238142 N 0.000
THITE_2115093 Thielavia terrestris THITE_2115093 N 0.000
SEPMUDRAFT_148866 Sphaerulina musiva SEPMUDRAFT_148866 N 0.000
PV11_00147 Exophiala sideris PV11_00147 N 0.000
PV10_07497 Exophiala mesophila PV10_07497 N 0.000
PV09_03090 Verruconis gallopava PV09_03090 N 0.000
PV08_00049 Exophiala spinifera PV08_00049 N 0.000
PV07_04335 Cladophialophora immunda PV07_04335 N 0.000
PV06_01443 Exophiala oligosperma PV06_01443 N 0.000
PV05_04616 Exophiala xenobiotica PV05_04616 N 0.000
PV04_05931 Capronia semiimmersa PV04_05931 N 0.000
PDE_04503 Penicillium oxalicum PDE_04503 N 0.000
PABG_07803 Paracoccidioides brasiliensis PABG_07803 N 0.000
PAAG_08396 Paracoccidioides sp lutzii PAAG_08396 N 0.000
NechaG72345 Fusarium solani NechaG72345 N 0.000
TRIREDRAFT_52841 Trichoderma reesei TRIREDRAFT_52841 N 0.000
TRIVIDRAFT_223962 Trichoderma virens TRIVIDRAFT_223962 N 0.000
UREG_02672 Uncinocarpus reesii UREG_02672 N 0.000
KLTH0E08778g Kluyveromyces thermotolerans KLTH0E08778g N 0.000
fgenesh1_pm.00795_#_71 Aspergillus carbonarius fgenesh1_pm.00795_#_71 N 0.000
estExt_Genewise1.C_32092 Cryphonectria parasitica estExt_Genewise1.C_32092 N 0.000
AB02376.1 Alternaria brassicicola AB02376.1 N 0.000
NCU08000 Neurospora crassa NCU08000 N 0.000
fgenesh1_pg.C_chr_4000614 Mycosphaerella graminicola fgenesh1_pg.C_chr_4000614 N 0.000
estExt_Genewise1Plus.C_sca_82_chr10_2_00666 Nectria haematococca estExt_Genewise1Plus.C_sca_82_chr10_2_00666 N 0.000
estExt_Genewise1Plus.C_590020 Mycosphaerella fijiensis estExt_Genewise1Plus.C_590020 N 0.000
estExt_Genewise1Plus.C_30389 Neurospora discreta estExt_Genewise1Plus.C_30389 N 0.000
e_gw1.3.1055.1 Cochliobolus heterostrophus C5 e_gw1.3.1055.1 N 0.000
Z519_07768 Cladophialophora bantiana Z519_07768 N 0.000
Z518_08246 Rhinocladiella mackenziei Z518_08246 N 0.000
YALI0_D12628g Yarrowia lipolytica YALI0_D12628g N 0.000
VHEMI00485 Torrubiella hemipterigena VHEMI00485 N 0.000
V499_05441 Pseudogymnoascus pannorum V499_05441 N 0.000
MYCTH_2298696 Myceliophthora thermophila MYCTH_2298696 N 0.000
Mycgr3G92834 Zymoseptoria tritici Mycgr3G92834 N 0.000
CPC735_062800 Coccidioides posadasii CPC735_062800 N 0.000
COCVIDRAFT_38655 Bipolaris victoriae COCVIDRAFT_38655 N 0.000
COCSADRAFT_191370 Bipolaris sorokiniana COCSADRAFT_191370 N 0.000
COCMIDRAFT_98604 Bipolaris oryzae COCMIDRAFT_98604 N 0.000
COCCADRAFT_28209 Bipolaris zeicola COCCADRAFT_28209 N 0.000
COCC4DRAFT_48711 Bipolaris maydis COCC4DRAFT_48711 N 0.000
CFIO01_10413 Colletotrichum fioriniae CFIO01_10413 N 0.000
ATEG_02243 Aspergillus terreus CADATEAG00000116 N 0.000
ANIA_07050 Aspergillus nidulans CADANIAG00000421 N 0.000
Bcin15g03690 Botrytis cinerea Bcin15g03690 N 0.000
BBA_08712 Beauveria bassiana BBA_08712 N 0.000
BAUCODRAFT_76471 Baudoinia compniacensis BAUCODRAFT_76471 N 0.000
AUEXF2481DRAFT_43258 Aureobasidium subglaciale AUEXF2481DRAFT_43258 N 0.000
A1O1_03477 Capronia coronata A1O1_03477 N 0.000
SNOG_12765 Stagonospora nodorum SNOG_12765 N 0.000
DOTSEDRAFT_71663 Dothistroma septosporum DOTSEDRAFT_71663 N 0.000
EPUS_03180 Endocarpon pusillum EPUS_03180 N 0.000
EURHEDRAFT_416477 Aspergillus ruber EURHEDRAFT_416477 N 0.000
MYCFIDRAFT_61348 Pseudocercospora fijiensis MYCFIDRAFT_61348 N 0.000
MGG_01836 Magnaporthe oryzae MGG_01836 N 0.000
MAPG_05005 Magnaporthe poae MAPG_05005 N 0.000
M438DRAFT_357635 Aureobasidium pullulans M438DRAFT_357635 N 0.000
M437DRAFT_75522 Aureobasidium melanogenum M437DRAFT_75522 N 0.000
KUCA_T00003965001 Kuraishia capsulata KUCA_T00003965001 N 0.000
KLTH0E08778g Lachancea thermotolerans KLTH0E08778g N 0.000
HMPREF1120_07037 Exophiala dermatitidis HMPREF1120_07037 N 0.000
H105_03019 Trichophyton soudanense H105_03019 N 0.000
H102_02999 Trichophyton rubrum H102_02999 N 0.000
GMDG_07239 Pseudogymnoascus destructans GMDG_07239 N 0.000
GGTG_08792 Gaeumannomyces graminis GGTG_08792 N 0.000
FOXG_04196 Fusarium oxysporum FOXG_04196 N 0.000
FGRRES_01936 Fusarium graminearum FGRRES_01936 N 0.000
EV44_g4401 Erysiphe necator EV44_g4401 N 0.000
CIMG_08688 Coccidioides immitis CIMG_08688 N 0.000