CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000015552
(
Ovis aries
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSOARG00000015552
T237419_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PAX2
M03294_2.00
Homo sapiens
SGTCACGCWTSRNTGVNY
RNBCANYSAWGCGTGACS
SELEX
Jolma et al.(2013)
PAX2_1
0.776
0.776
PAX2
M05428_2.00
Homo sapiens
NSGYYACGCNYSRNYRVNBN
NVNBYRNYSRNGCGTRRCSN
SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX
0.776
0.776
Pax2
M02690_2.00
Mus musculus
NRTCAYKB
VMRTGAYN
SELEX
Mathelier et al.(2014)
MA0067.1
0.776
0.776
PAX2
M10808_2.00
Homo sapiens
NNHNRTYAHKBRHDMBBNN
NNVVKHDYVMDWRAYNDNN
Transfac
Matys et al.(2006)
V$PAX2_01
0.776
0.776
PAX2
M10809_2.00
Homo sapiens
NDSTTTNNN
NNNAAASHN
Transfac
Matys et al.(2006)
V$PAX2_02
0.776
0.776
PAX2
M10810_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX2_Q2
0.776
0.776
PAX2
M05429_2.00
Homo sapiens
NSGTCACGCWTSANYGVNYN
NRNBCRNTSAWGCGTGACSN
SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX
0.776
0.776
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000016682
Paired box
20
135
RGGVRSGARRLAGPRRGRESSKPGAGVPAFSESLQRLAGQGCRLLVRYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIR
ENSOARP00000016682
Homeodomain
247
277
RADTFTQQQLEALDRVFERPSYPDVFQASEH
Links
Other
Homeodomain,Paired box
family TFs
Other
Ovis aries
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy