ENSPPYG00000013219 (Pongo abelii)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSPPYG00000013219 T237466_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX3
M00358_2.00
Homo sapiens
NRTNNNN

NNNNAYN
PBM
Barrera et al.(2016)
PAX3_REF
1.000 1.000
PAX3
M03297_2.00
Homo sapiens
TAATYRATTA

TAATYRATTA
SELEX
Jolma et al.(2013)
PAX3_1
1.000 1.000
PAX3
M03885_2.00
Homo sapiens
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
PAX3_1
1.000 1.000
PAX3
M03886_2.00
Homo sapiens
RATTMGTCACGST

ASCGTGACKAATY
SELEX
Nitta et al.(2015)
PAX3_2
1.000 1.000
PAX3
M05438_2.00
Homo sapiens
NSGTCACGSHHATTAN

NTAATDDSCGTGACSN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1
1.000 1.000
PAX3
M05439_2.00
Homo sapiens
NDAATCRATTMN

NKAATYGATTHN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2
1.000 1.000
PAX3
M05440_2.00
Homo sapiens
NBRATTMGTCACGSHN

NDSCGTGACKAATYVN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3
1.000 1.000
PAX3
M09585_2.00
Homo sapiens
WSYRTGACWAATBNN

NNVATTWGTCAYRSW
Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063
1.000 1.000
PAX3
M10816_2.00
Homo sapiens
TCGTCACRCHYHM

KDRDGYGTGACGA
Transfac
Matys et al.(2006)
V$PAX3_01
1.000 1.000
PAX3
M10817_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX3_B
1.000 1.000
PAX3
M05441_2.00
Homo sapiens
NNGTCACGSHWRTTAN

NTAAYWDSCGTGACNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1
1.000 1.000
PAX3
M05442_2.00
Homo sapiens
NWAATCRATTAN

NTAATYGATTWN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2
1.000 1.000
PAX3
M05443_2.00
Homo sapiens
NNRATTVGTCRCGSHN

NDSCGYGACBAATYNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3
1.000 1.000
PAX3
M00352_2.00
Homo sapiens
VNTAATYR

YRATTANB
PBM
Barrera et al.(2016)
PAX3_G48R
0.995 0.995
PAX3
M00353_2.00
Homo sapiens
NNNNRTNNN

NNNAYNNNN
PBM
Barrera et al.(2016)
PAX3_N47H
0.995 0.995
PAX3
M00354_2.00
Homo sapiens
NNNRYNN

NNRYNNN
PBM
Barrera et al.(2016)
PAX3_N47K
0.995 0.995
PAX3
M00355_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_P50L
0.995 0.995
PAX3
M00356_2.00
Homo sapiens
NNKWCAYDDWN

NWHHRTGWMNN
PBM
Barrera et al.(2016)
PAX3_R270C
0.995 0.995
PAX3
M00357_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_R56L
0.995 0.995
PAX3
M00359_2.00
Homo sapiens
NTAATYRV

BYRATTAN
PBM
Barrera et al.(2016)
PAX3_Y90H
0.995 0.995
Pax7
M00541_2.00
Mus musculus
NNVATTWN

NWAATBNN
PBM
Berger et al.(2008)
Pax7_3783
0.951 0.951
PAX7
M03292_2.00
Homo sapiens
WAATYRATTA

TAATYRATTW
SELEX
Jolma et al.(2013)
PAX7_1
0.951 0.951
PAX7
M03293_2.00
Homo sapiens
TAATYGATTA

TAATCRATTA
SELEX
Jolma et al.(2013)
PAX7_2
0.951 0.951
PAX7
M05416_2.00
Homo sapiens
NDSCGTGACGAATYR

YRATTCGTCACGSHN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1
0.951 0.951
PAX7
M05417_2.00
Homo sapiens
NSGTCACGSHWRTTAN

NTAAYWDSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2
0.951 0.951
PAX7
M05418_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3
0.951 0.951
PAX7
M05422_2.00
Homo sapiens
BVATTMGTCACGSHN

NDSCGTGACKAATBV
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1
0.951 0.951
PAX7
M05423_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2
0.951 0.951
PAX7
M05424_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3
0.951 0.951
PAX7
M05874_2.00
Homo sapiens
ATTMGTYACGSHN

NDSCGTRACKAAT
SMiLE-seq
Isakova et al.(2017)
PAX7
0.951 0.951
Pax7
M09586_2.00
Mus musculus
NNNNNYAATTDNNHAATTAN

NTAATTDNNHAATTRNNNNN
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1
0.951 0.951
Pax7
M09587_2.00
Mus musculus
DTAATYDGATTA

TAATCHRATTAH
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2
0.951 0.951
Pax7
M09588_2.00
Mus musculus
TAATTGATTW

WAATCAATTA
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3
0.951 0.951
PAX7
M05419_2.00
Homo sapiens
NVATTVGTCRCGSYN

NRSCGYGACBAATBN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1
0.951 0.951
PAX7
M05420_2.00
Homo sapiens
NNGTCACGSHHRTTAN

NTAAYDDSCGTGACNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2
0.951 0.951
PAX7
M05421_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3
0.951 0.951
PAX7
M05425_2.00
Homo sapiens
YRATTMGTCACGSHN

NDSCGTGACKAATYR
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1
0.951 0.951
PAX7
M05426_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2
0.951 0.951
PAX7
M05427_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3
0.951 0.951
prd
M03894_2.00
Drosophila melanogaster
VATTVGTCACGS

SCGTGACBAATB
SELEX
Nitta et al.(2015)
prd_1
0.813 0.813
prd
M03895_2.00
Drosophila melanogaster
NRATCRATYN

NRATYGATYN
SELEX
Nitta et al.(2015)
prd_2
0.813 0.813
prd
M06555_2.00
Drosophila melanogaster
HSWAACNGH

DCNGTTWSD
B1H
Mathelier et al.(2014)
MA0239.1
0.813 0.813
prd
M09684_2.00
Drosophila melanogaster
HMVNTHHKWMACGS

SCGTKWMDDANBKD
Misc
Kulakovskiy et al.(2009)
prd
0.813 0.813
prd
M10818_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$PRD_Q6
0.813 0.813
gsb-n
M03888_2.00
Drosophila melanogaster
SCGTRWCKAATB

VATTMGWYACGS
SELEX
Nitta et al.(2015)
gsb-n_1
0.791 0.791
gsb
M03889_2.00
Drosophila melanogaster
RATTMGTCACGSN

NSCGTGACKAATY
SELEX
Nitta et al.(2015)
gsb_1
0.769 0.769
gsb
M03890_2.00
Drosophila melanogaster
NNNAATCRATTWNN

NNWAATYGATTNNN
SELEX
Nitta et al.(2015)
gsb_2
0.769 0.769
gsb
M03891_2.00
Drosophila melanogaster
RTBDMTAATTGATTD

HAATCAATTAKHVAY
SELEX
Nitta et al.(2015)
gsb_3
0.769 0.769
gsb
M03892_2.00
Drosophila melanogaster
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
gsb_4
0.769 0.769
gsb
M03893_2.00
Drosophila melanogaster
NSCGTGACKAATBV

BVATTMGTCACGSN
SELEX
Nitta et al.(2015)
gsb_5
0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000014772 Paired box 34 159
ENSPPYP00000014772 Homeodomain 220 276

Links

Other Homeodomain,Paired box family TFs
Other Pongo abelii TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
TBX21 Homo sapiens ENSG00000073861 D 0.000
Tbr1 Mus musculus ENSMUSG00000035033 D 0.000
Tbx21 Mus musculus ENSMUSG00000001444 D 0.000
A0A075Q982_PATMI Patiria miniata A0A075Q982_PATMI D 0.000
Eomes Mus musculus ENSMUSG00000032446 D 0.000
TBR1 Homo sapiens ENSG00000136535 D 0.000
EOMES Homo sapiens ENSG00000163508 D 0.000
TBX21 Pan troglodytes ENSPTRG00000009335 I 0.000
TBR1 Pan troglodytes ENSPTRG00000012576 I 0.000
TBX21 Pteropus vampyrus ENSPVAG00000004921 I 0.000
EOMES Pteropus vampyrus ENSPVAG00000009999 I 0.000
ENSPSIG00000005360 Pelodiscus sinensis ENSPSIG00000005360 I 0.000
ENSPSIG00000004373 Pelodiscus sinensis ENSPSIG00000004373 I 0.000
EOMES Pan troglodytes ENSPTRG00000014705 I 0.000
ENSSSCG00000022626 Sus scrofa ENSSSCG00000022626 I 0.000
Tbx21 Rattus norvegicus ENSRNOG00000009427 I 0.000
ENSSHAG00000016616 Sarcophilus harrisii ENSSHAG00000016616 I 0.000
ENSSHAG00000017378 Sarcophilus harrisii ENSSHAG00000017378 I 0.000
ENSSHAG00000018315 Sarcophilus harrisii ENSSHAG00000018315 I 0.000
Tbr1 Rattus norvegicus ENSRNOG00000005049 I 0.000
ENSSSCG00000011219 Sus scrofa ENSSSCG00000011219 I 0.000
TBX21 Sus scrofa ENSSSCG00000017517 I 0.000
ENSPPYG00000014055 Pongo abelii ENSPPYG00000014055 I 0.000
ENSPPYG00000012882 Pongo abelii ENSPPYG00000012882 I 0.000
ENSPPYG00000008879 Pongo abelii ENSPPYG00000008879 I 0.000
EOMES Otolemur garnettii ENSOGAG00000030966 I 0.000
ENSONIG00000007180 Oreochromis niloticus ENSONIG00000007180 I 0.000
ENSONIG00000008933 Oreochromis niloticus ENSONIG00000008933 I 0.000
ENSONIG00000018223 Oreochromis niloticus ENSONIG00000018223 I 0.000
ENSONIG00000019678 Oreochromis niloticus ENSONIG00000019678 I 0.000
TBR1 Ochotona princeps ENSOPRG00000005150 I 0.000
eomesa Oryzias latipes ENSORLG00000002320 I 0.000
eomesb Oryzias latipes ENSORLG00000005393 I 0.000
tbr1b Oryzias latipes ENSORLG00000016828 I 0.000
ENSPANG00000011539 Papio anubis ENSPANG00000011539 I 0.000
ENSPANG00000018688 Papio anubis ENSPANG00000018688 I 0.000
EOMES Procavia capensis ENSPCAG00000013650 I 0.000
ENSPFOG00000006471 Poecilia formosa ENSPFOG00000006471 I 0.000
ENSPFOG00000017461 Poecilia formosa ENSPFOG00000017461 I 0.000
ENSPFOG00000017938 Poecilia formosa ENSPFOG00000017938 I 0.000
ENSPFOG00000018019 Poecilia formosa ENSPFOG00000018019 I 0.000
ENSPMAG00000003985 Petromyzon marinus ENSPMAG00000003985 I 0.000
TBX21 Otolemur garnettii ENSOGAG00000006160 I 0.000
ENSSTOG00000001626 Ictidomys tridecemlineatus ENSSTOG00000001626 I 0.000
ENSSTOG00000020918 Ictidomys tridecemlineatus ENSSTOG00000020918 I 0.000
ENSP00000374205-D1 Bos grunniens ENSP00000374205-D1 I 0.000
ENSP00000374205 Macaca fascicularis ENSP00000374205 I 0.000
ENSP00000388620-D1 Bos grunniens ENSP00000388620-D1 I 0.000
ENSP00000388620 Macaca fascicularis ENSP00000388620 I 0.000
Myotis_brandtii_KPNB1_10030428 Myotis brandtii Myotis_brandtii_KPNB1_10030428 I 0.000
Myotis_brandtii_SLC4A10_10035570 Myotis brandtii Myotis_brandtii_SLC4A10_10035570 I 0.000
Ogr17175 Ophisaurus gracilis Ogr17175 I 0.000
Pvit_15940 Pogona vitticeps Pvit_15940 I 0.000
Pvit_16634 Pogona vitticeps Pvit_16634 I 0.000
estExt_fgenesh2_kg.C_1840001 Branchiostoma floridae estExt_fgenesh2_kg.C_1840001 I 0.000
fgenesh2_pg.scaffold_55000054 Branchiostoma floridae fgenesh2_pg.scaffold_55000054 I 0.000
Sakowv30002752m.g Saccoglossus kowalevskii Sakowv30002752m.g I 0.000
AAI66068 Xenopus tropicalis AAI66068 I 0.000
tbx21 Xenopus tropicalis XB-GENE-479103 I 0.000
eomes Xenopus tropicalis XB-GENE-479769 I 0.000
eomes.S Xenopus laevis XB-GENE-6487182 I 0.000
eomes.L Xenopus laevis XB-GENE-865305 I 0.000
ENSP00000177694 Macaca fascicularis ENSP00000177694 I 0.000
ENSBTAP00000018875-D1 Bos grunniens ENSBTAP00000018875-D1 I 0.000
Brh_R007719 Buceros rhinoceros Brh_R007719 I 0.000
ENSSTOG00000023843 Ictidomys tridecemlineatus ENSSTOG00000023843 I 0.000
TBR1 Tupaia belangeri ENSTBEG00000014183 I 0.000
tbx21 Tetraodon nigroviridis ENSTNIG00000010103 I 0.000
tbr1b Tetraodon nigroviridis ENSTNIG00000016497 I 0.000
eomesa Tetraodon nigroviridis ENSTNIG00000017582 I 0.000
eomesb Tetraodon nigroviridis ENSTNIG00000019116 I 0.000
tbr1b Takifugu rubripes ENSTRUG00000005183 I 0.000
eomesa Takifugu rubripes ENSTRUG00000005361 I 0.000
eomesb Takifugu rubripes ENSTRUG00000008966 I 0.000
tbx21 Takifugu rubripes ENSTRUG00000012995 I 0.000
ENSVPAG00000002720 Vicugna pacos ENSVPAG00000002720 I 0.000
ENSXMAG00000000528 Xiphophorus maculatus ENSXMAG00000000528 I 0.000
ENSXMAG00000011427 Xiphophorus maculatus ENSXMAG00000011427 I 0.000
ENSXMAG00000013655 Xiphophorus maculatus ENSXMAG00000013655 I 0.000
LotgiG129911 Lottia gigantea LotgiG129911 I 0.000
Alligator_sinensis_CCG012002.1 Alligator sinensis Alligator_sinensis_CCG012002.1 I 0.000
Alligator_sinensis_CCG014450.1 Alligator sinensis Alligator_sinensis_CCG014450.1 I 0.000
tbr1 Xenopus tropicalis XB-GENE-942241 I 0.000
EOMES Anolis carolinensis ENSACAG00000014201 I 0.000
ENSCSAG00000009676 Chlorocebus sabaeus ENSCSAG00000009676 I 0.000
ENSCSAG00000015663 Chlorocebus sabaeus ENSCSAG00000015663 I 0.000
tbx21 Danio rerio ENSDARG00000004473 I 0.000
tbr1b Danio rerio ENSDARG00000004712 I 0.000
eomesa Danio rerio ENSDARG00000006640 I 0.000
tbr1a Danio rerio ENSDARG00000076259 I 0.000
eomesb Danio rerio ENSDARG00000104243 I 0.000
TBR1 Dasypus novemcinctus ENSDNOG00000009816 I 0.000
Tbx21 Dipodomys ordii ENSDORG00000013302 I 0.000
Eomes Dipodomys ordii ENSDORG00000016346 I 0.000
EOMES Equus caballus ENSECAG00000021052 I 0.000
EOMES Erinaceus europaeus ENSEEUG00000005958 I 0.000
ENSFALG00000004466 Ficedula albicollis ENSFALG00000004466 I 0.000
ENSFALG00000009181 Ficedula albicollis ENSFALG00000009181 I 0.000
EOMES Felis catus ENSFCAG00000003602 I 0.000
TBX21 Felis catus ENSFCAG00000010607 I 0.000
TBR1 Felis catus ENSFCAG00000025073 I 0.000
ENSCSAG00000002587 Chlorocebus sabaeus ENSCSAG00000002587 I 0.000
TBX21 Cavia porcellus ENSCPOG00000026273 I 0.000
ENSAMEG00000004661 Ailuropoda melanoleuca ENSAMEG00000004661 I 0.000
ENSAMEG00000012360 Ailuropoda melanoleuca ENSAMEG00000012360 I 0.000
ENSAMEG00000012731 Ailuropoda melanoleuca ENSAMEG00000012731 I 0.000
ENSAMXG00000009990 Astyanax mexicanus ENSAMXG00000009990 I 0.000
ENSAMXG00000010492 Astyanax mexicanus ENSAMXG00000010492 I 0.000
ENSAMXG00000012247 Astyanax mexicanus ENSAMXG00000012247 I 0.000
TBX21 Bos taurus ENSBTAG00000014199 I 0.000
EOMES Bos taurus ENSBTAG00000016920 I 0.000
TBR1 Bos taurus ENSBTAG00000021692 I 0.000
EOMES Canis familiaris ENSCAFG00000005510 I 0.000
TBR1 Canis familiaris ENSCAFG00000009984 I 0.000
TBX21 Canis familiaris ENSCAFG00000016705 I 0.000
EOMES Callithrix jacchus ENSCJAG00000004263 I 0.000
TBR1 Callithrix jacchus ENSCJAG00000005603 I 0.000
TBX21 Callithrix jacchus ENSCJAG00000007796 I 0.000
EOMES Cavia porcellus ENSCPOG00000004381 I 0.000
ENSCPOG00000005881 Cavia porcellus ENSCPOG00000005881 I 0.000
eomesa Gasterosteus aculeatus ENSGACG00000003160 I 0.000
tbr1b Gasterosteus aculeatus ENSGACG00000005648 I 0.000
eomesb Gasterosteus aculeatus ENSGACG00000006345 I 0.000
TBX21 Macaca mulatta ENSMMUG00000007098 I 0.000
TBR1 Macaca mulatta ENSMMUG00000011911 I 0.000
TBR1 Monodelphis domestica ENSMODG00000005353 I 0.000
ENSMODG00000012526 Monodelphis domestica ENSMODG00000012526 I 0.000
ENSMPUG00000000551 Mustela putorius furo ENSMPUG00000000551 I 0.000
ENSMPUG00000011981 Mustela putorius furo ENSMPUG00000011981 I 0.000
ENSMPUG00000015272 Mustela putorius furo ENSMPUG00000015272 I 0.000
ENSNLEG00000001655 Nomascus leucogenys ENSNLEG00000001655 I 0.000
ENSNLEG00000002040 Nomascus leucogenys ENSNLEG00000002040 I 0.000
ENSNLEG00000004050 Nomascus leucogenys ENSNLEG00000004050 I 0.000
EOMES Ornithorhynchus anatinus ENSOANG00000012619 I 0.000
ENSOARG00000006620 Ovis aries ENSOARG00000006620 I 0.000
ENSOARG00000008340 Ovis aries ENSOARG00000008340 I 0.000
ENSOARG00000014467 Ovis aries ENSOARG00000014467 I 0.000
ENSOCUG00000000451 Oryctolagus cuniculus ENSOCUG00000000451 I 0.000
TBR1 Oryctolagus cuniculus ENSOCUG00000005884 I 0.000
TBX21 Oryctolagus cuniculus ENSOCUG00000012907 I 0.000
ENSMMUG00000001904 Macaca mulatta ENSMMUG00000001904 I 0.000
TBX21 Myotis lucifugus ENSMLUG00000014542 I 0.000
EOMES Gallus gallus ENSGALG00000027247 I 0.000
TBX21 Gorilla gorilla ENSGGOG00000002208 I 0.000
EOMES Gorilla gorilla ENSGGOG00000008358 I 0.000
TBR1 Gorilla gorilla ENSGGOG00000015752 I 0.000
ENSGMOG00000002634 Gadus morhua ENSGMOG00000002634 I 0.000
ENSGMOG00000003675 Gadus morhua ENSGMOG00000003675 I 0.000
ENSGMOG00000014981 Gadus morhua ENSGMOG00000014981 I 0.000
ENSLACG00000003893 Latimeria chalumnae ENSLACG00000003893 I 0.000
ENSLACG00000016985 Latimeria chalumnae ENSLACG00000016985 I 0.000
EOMES Loxodonta africana ENSLAFG00000004142 I 0.000
TBR1 Loxodonta africana ENSLAFG00000011541 I 0.000
ENSLOCG00000002398 Lepisosteus oculatus ENSLOCG00000002398 I 0.000
ENSLOCG00000008583 Lepisosteus oculatus ENSLOCG00000008583 I 0.000
ENSLOCG00000013335 Lepisosteus oculatus ENSLOCG00000013335 I 0.000
ENSMICG00000015729 Microcebus murinus ENSMICG00000015729 I 0.000
EOMES Myotis lucifugus ENSMLUG00000001462 I 0.000
TBR1 Myotis lucifugus ENSMLUG00000006008 I 0.000
TBR1 Otolemur garnettii ENSOGAG00000004936 I 0.000