PAX3 (Taeniopygia guttata)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ENSTGUG00000007761 T237508_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX3
M00358_2.00
Homo sapiens
NRTNNNN

NNNNAYN
PBM
Barrera et al.(2016)
PAX3_REF
0.984 0.984
PAX3
M03297_2.00
Homo sapiens
TAATYRATTA

TAATYRATTA
SELEX
Jolma et al.(2013)
PAX3_1
0.984 0.984
PAX3
M03885_2.00
Homo sapiens
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
PAX3_1
0.984 0.984
PAX3
M03886_2.00
Homo sapiens
RATTMGTCACGST

ASCGTGACKAATY
SELEX
Nitta et al.(2015)
PAX3_2
0.984 0.984
PAX3
M05438_2.00
Homo sapiens
NSGTCACGSHHATTAN

NTAATDDSCGTGACSN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1
0.984 0.984
PAX3
M05439_2.00
Homo sapiens
NDAATCRATTMN

NKAATYGATTHN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2
0.984 0.984
PAX3
M05440_2.00
Homo sapiens
NBRATTMGTCACGSHN

NDSCGTGACKAATYVN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3
0.984 0.984
PAX3
M09585_2.00
Homo sapiens
WSYRTGACWAATBNN

NNVATTWGTCAYRSW
Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063
0.984 0.984
PAX3
M10816_2.00
Homo sapiens
TCGTCACRCHYHM

KDRDGYGTGACGA
Transfac
Matys et al.(2006)
V$PAX3_01
0.984 0.984
PAX3
M10817_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX3_B
0.984 0.984
PAX3
M05441_2.00
Homo sapiens
NNGTCACGSHWRTTAN

NTAAYWDSCGTGACNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1
0.984 0.984
PAX3
M05442_2.00
Homo sapiens
NWAATCRATTAN

NTAATYGATTWN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2
0.984 0.984
PAX3
M05443_2.00
Homo sapiens
NNRATTVGTCRCGSHN

NDSCGYGACBAATYNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3
0.984 0.984
PAX3
M00352_2.00
Homo sapiens
VNTAATYR

YRATTANB
PBM
Barrera et al.(2016)
PAX3_G48R
0.978 0.978
PAX3
M00353_2.00
Homo sapiens
NNNNRTNNN

NNNAYNNNN
PBM
Barrera et al.(2016)
PAX3_N47H
0.978 0.978
PAX3
M00354_2.00
Homo sapiens
NNNRYNN

NNRYNNN
PBM
Barrera et al.(2016)
PAX3_N47K
0.978 0.978
PAX3
M00355_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_P50L
0.978 0.978
PAX3
M00356_2.00
Homo sapiens
NNKWCAYDDWN

NWHHRTGWMNN
PBM
Barrera et al.(2016)
PAX3_R270C
0.978 0.978
PAX3
M00357_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_R56L
0.978 0.978
PAX3
M00359_2.00
Homo sapiens
NTAATYRV

BYRATTAN
PBM
Barrera et al.(2016)
PAX3_Y90H
0.978 0.978
Pax7
M00541_2.00
Mus musculus
NNVATTWN

NWAATBNN
PBM
Berger et al.(2008)
Pax7_3783
0.945 0.945
PAX7
M03292_2.00
Homo sapiens
WAATYRATTA

TAATYRATTW
SELEX
Jolma et al.(2013)
PAX7_1
0.945 0.945
PAX7
M03293_2.00
Homo sapiens
TAATYGATTA

TAATCRATTA
SELEX
Jolma et al.(2013)
PAX7_2
0.945 0.945
PAX7
M05416_2.00
Homo sapiens
NDSCGTGACGAATYR

YRATTCGTCACGSHN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1
0.945 0.945
PAX7
M05417_2.00
Homo sapiens
NSGTCACGSHWRTTAN

NTAAYWDSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2
0.945 0.945
PAX7
M05418_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3
0.945 0.945
PAX7
M05422_2.00
Homo sapiens
BVATTMGTCACGSHN

NDSCGTGACKAATBV
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1
0.945 0.945
PAX7
M05423_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2
0.945 0.945
PAX7
M05424_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3
0.945 0.945
PAX7
M05874_2.00
Homo sapiens
ATTMGTYACGSHN

NDSCGTRACKAAT
SMiLE-seq
Isakova et al.(2017)
PAX7
0.945 0.945
Pax7
M09586_2.00
Mus musculus
NNNNNYAATTDNNHAATTAN

NTAATTDNNHAATTRNNNNN
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1
0.945 0.945
Pax7
M09587_2.00
Mus musculus
DTAATYDGATTA

TAATCHRATTAH
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2
0.945 0.945
Pax7
M09588_2.00
Mus musculus
TAATTGATTW

WAATCAATTA
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3
0.945 0.945
PAX7
M05419_2.00
Homo sapiens
NVATTVGTCRCGSYN

NRSCGYGACBAATBN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1
0.945 0.945
PAX7
M05420_2.00
Homo sapiens
NNGTCACGSHHRTTAN

NTAAYDDSCGTGACNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2
0.945 0.945
PAX7
M05421_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3
0.945 0.945
PAX7
M05425_2.00
Homo sapiens
YRATTMGTCACGSHN

NDSCGTGACKAATYR
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1
0.945 0.945
PAX7
M05426_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2
0.945 0.945
PAX7
M05427_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3
0.945 0.945
prd
M03894_2.00
Drosophila melanogaster
VATTVGTCACGS

SCGTGACBAATB
SELEX
Nitta et al.(2015)
prd_1
0.808 0.808
prd
M03895_2.00
Drosophila melanogaster
NRATCRATYN

NRATYGATYN
SELEX
Nitta et al.(2015)
prd_2
0.808 0.808
prd
M06555_2.00
Drosophila melanogaster
HSWAACNGH

DCNGTTWSD
B1H
Mathelier et al.(2014)
MA0239.1
0.808 0.808
prd
M09684_2.00
Drosophila melanogaster
HMVNTHHKWMACGS

SCGTKWMDDANBKD
Misc
Kulakovskiy et al.(2009)
prd
0.808 0.808
prd
M10818_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$PRD_Q6
0.808 0.808
gsb-n
M03888_2.00
Drosophila melanogaster
SCGTRWCKAATB

VATTMGWYACGS
SELEX
Nitta et al.(2015)
gsb-n_1
0.791 0.791
gsb
M03889_2.00
Drosophila melanogaster
RATTMGTCACGSN

NSCGTGACKAATY
SELEX
Nitta et al.(2015)
gsb_1
0.769 0.769
gsb
M03890_2.00
Drosophila melanogaster
NNNAATCRATTWNN

NNWAATYGATTNNN
SELEX
Nitta et al.(2015)
gsb_2
0.769 0.769
gsb
M03891_2.00
Drosophila melanogaster
RTBDMTAATTGATTD

HAATCAATTAKHVAY
SELEX
Nitta et al.(2015)
gsb_3
0.769 0.769
gsb
M03892_2.00
Drosophila melanogaster
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
gsb_4
0.769 0.769
gsb
M03893_2.00
Drosophila melanogaster
NSCGTGACKAATBV

BVATTMGTCACGSN
SELEX
Nitta et al.(2015)
gsb_5
0.769 0.769
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000008000 Paired box 9 134
ENSTGUP00000008000 Homeodomain 195 251

Links

Other Homeodomain,Paired box family TFs
Other Taeniopygia guttata TFs

234 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Afo_R013450 Aptenodytes forsteri Afo_R013450 N 0.000
Alligator_sinensis_CCG022153.1 Alligator sinensis Alligator_sinensis_CCG022153.1 N 0.000
Cmyd_10004958 Chelonia mydas Cmyd_10004958 N 0.000
ENSACAG00000006811 Anolis carolinensis ENSACAG00000006811 N 0.000
ENSAMEG00000000835 Ailuropoda melanoleuca ENSAMEG00000000835 N 0.000
ENSBTAG00000024657 Bos taurus ENSBTAG00000024657 N 0.000
ENSCAFG00000007675 Canis familiaris ENSCAFG00000007675 N 0.000
ENSCJAG00000008421 Callithrix jacchus ENSCJAG00000008421 N 0.000
ENSCPOG00000011753 Cavia porcellus ENSCPOG00000011753 N 0.000
ENSCSAG00000006026 Chlorocebus sabaeus ENSCSAG00000006026 N 0.000
ENSDNOG00000043611 Dasypus novemcinctus ENSDNOG00000043611 N 0.000
ENSECAG00000002280 Equus caballus ENSECAG00000002280 N 0.000
ENSEEUG00000002360 Erinaceus europaeus ENSEEUG00000002360 N 0.000
ENSFALG00000010996 Ficedula albicollis ENSFALG00000010996 N 0.000
ENSFCAG00000009945 Felis catus ENSFCAG00000009945 N 0.000
ENSGACG00000019434 Gasterosteus aculeatus ENSGACG00000019434 N 0.000
ENSGALG00000007287 Gallus gallus ENSGALG00000007287 N 0.000
ENSGGOG00000026119 Gorilla gorilla ENSGGOG00000026119 N 0.000
ENSLAFG00000011508 Loxodonta africana ENSLAFG00000011508 N 0.000
ENSLOCG00000007033 Lepisosteus oculatus ENSLOCG00000007033 N 0.000
ENSMEUG00000006553 Macropus eugenii ENSMEUG00000006553 N 0.000
ENSMGAG00000009741 Meleagris gallopavo ENSMGAG00000009741 N 0.000
ENSMLUG00000009869 Myotis lucifugus ENSMLUG00000009869 N 0.000
ENSMMUG00000011714 Macaca mulatta ENSMMUG00000011714 N 0.000
ENSMODG00000020173 Monodelphis domestica ENSMODG00000020173 N 0.000
ENSMPUG00000000298 Mustela putorius furo ENSMPUG00000000298 N 0.000
ENSNLEG00000013034 Nomascus leucogenys ENSNLEG00000013034 N 0.000
ENSOANG00000004512 Ornithorhynchus anatinus ENSOANG00000004512 N 0.000
ENSOARG00000003340 Ovis aries ENSOARG00000003340 N 0.000
ENSOARG00000011184 Ovis aries ENSOARG00000011184 N 0.000
ENSOCUG00000005385 Oryctolagus cuniculus ENSOCUG00000005385 N 0.000
ENSOGAG00000032105 Otolemur garnettii ENSOGAG00000032105 N 0.000
ENSONIG00000009063 Oreochromis niloticus ENSONIG00000009063 N 0.000
ENSOPRG00000000311 Ochotona princeps ENSOPRG00000000311 N 0.000
ENSORLG00000005855 Oryzias latipes ENSORLG00000005855 N 0.000
ENSP00000339030 Macaca fascicularis ENSP00000339030 N 0.000
ENSP00000339030-D1 Bos grunniens ENSP00000339030-D1 N 0.000
ENSPANG00000010800 Papio anubis ENSPANG00000010800 N 0.000
ENSPCAG00000011859 Procavia capensis ENSPCAG00000011859 N 0.000
ENSPFOG00000007955 Poecilia formosa ENSPFOG00000007955 N 0.000
ENSPPYG00000003246 Pongo abelii ENSPPYG00000003246 N 0.000
ENSPSIG00000005217 Pelodiscus sinensis ENSPSIG00000005217 N 0.000
ENSSARG00000013155 Sorex araneus ENSSARG00000013155 N 0.000
ENSSHAG00000006526 Sarcophilus harrisii ENSSHAG00000006526 N 0.000
ENSSSCG00000013155 Sus scrofa ENSSSCG00000013155 N 0.000
ENSTBEG00000011227 Tupaia belangeri ENSTBEG00000011227 N 0.000
ENSTGUG00000007128 Taeniopygia guttata ENSTGUG00000007128 N 0.000
ENSTNIG00000006126 Tetraodon nigroviridis ENSTNIG00000006126 N 0.000
ENSTRUG00000001110 Takifugu rubripes ENSTRUG00000001110 N 0.000
ENSTSYG00000010631 Tarsius syrichta ENSTSYG00000010631 N 0.000
ENSVPAG00000006317 Vicugna pacos ENSVPAG00000006317 N 0.000
ENSXMAG00000009884 Xiphophorus maculatus ENSXMAG00000009884 N 0.000
Gfo_R011905 Geospiza fortis Gfo_R011905 N 0.000
Myotis_brandtii_ZFP91_10002181 Myotis brandtii Myotis_brandtii_ZFP91_10002181 N 0.000
Ogr13692 Ophisaurus gracilis Ogr13692 N 0.000
Pvit_00119 Pogona vitticeps Pvit_00119 N 0.000
si:ch211-113e8.10 Danio rerio ENSDARG00000079631 N 0.000
Tal_R001381 Tyto alba Tal_R001381 N 0.000
Zfp91 Dipodomys ordii ENSDORG00000013985 N 0.000
Zfp91 Mus musculus ENSMUSG00000024695 N 0.000
ZFP91 Homo sapiens ENSG00000186660 N 0.000
Zfp91 Rattus norvegicus ENSRNOG00000012524 N 0.000
ZFP91 Pan troglodytes ENSPTRG00000029949 N 0.000
zfp91 Xenopus tropicalis XB-GENE-6000457 N 0.000