CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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toe
(
Drosophila melanogaster
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0036285
T237543_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
(Direct)
(Direct)
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.859
0.859
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0075712
Paired box
125
230
TNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINRILR
FBpp0075712
Homeodomain
385
441
RRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQVWFSNRRAKWRR
FBpp0304397
Paired box
125
230
TNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLLGTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINRILR
FBpp0304397
Homeodomain
385
430
RRNRTTFSPEQLDELEKEFDKSHYPCVNTREKLAARTALSEARVQT
Links
Other
Homeodomain,Paired box
family TFs
Other
Drosophila melanogaster
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GD12721
Drosophila simulans
FBgn0184448
I
1.000
GM24657
Drosophila sechellia
FBgn0179520
I
1.000
GE20122
Drosophila yakuba
FBgn0237445
I
1.000
GG13832
Drosophila erecta
FBgn0106095
I
1.000
GF24980
Drosophila ananassae
FBgn0101972
I
0.981
GJ13266
Drosophila virilis
FBgn0200492
I
0.969
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.969
GH16065
Drosophila grimshawi
FBgn0123536
I
0.969
GK12629
Drosophila willistoni
FBgn0214638
I
0.967
GI12329
Drosophila mojavensis
FBgn0135086
I
0.915
AGAP011417
Anopheles gambiae
AGAP011417
I
0.895
MDOA006963
Musca domestica
MDOA006963
I
0.877
LCUP004290
Lucilia cuprina
LCUP004290
I
0.877
AFAF005899
Anopheles farauti
AFAF005899
I
0.873
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.864
GL24956
Drosophila persimilis
FBgn0162543
I
0.864
NV12005
Nasonia vitripennis
NV12005
I
0.860
eyg
Drosophila melanogaster
FBgn0000625
D
0.859
GH16064
Drosophila grimshawi
FBgn0123535
I
0.859
GK12628
Drosophila willistoni
FBgn0214637
I
0.859
GM24656
Drosophila sechellia
FBgn0179519
I
0.859
GI12327
Drosophila mojavensis
FBgn0135084
I
0.859
GJ13265
Drosophila virilis
FBgn0200491
I
0.859
GD12719
Drosophila simulans
FBgn0184446
I
0.857
SINV20456
Solenopsis invicta
SINV20456
I
0.856
PHUM427950
Pediculus humanus
PHUM427950
I
0.849
TC007194
Tribolium castaneum
TC007194
I
0.849
MDOA004637
Musca domestica
MDOA004637
I
0.847
GE20121
Drosophila yakuba
FBgn0237444
I
0.843
GG13831
Drosophila erecta
FBgn0106094
I
0.843
HMEL010417
Heliconius melpomene
HMEL010417
I
0.842
GF24979
Drosophila ananassae
FBgn0101971
I
0.842
Hsal_03768--XP_394294.2_APIME
Harpegnathos saltator
Hsal_03768--XP_394294.2_APIME
I
0.841
KGM_15291
Danaus plexippus
KGM_15291
I
0.837
LCUP004289
Lucilia cuprina
LCUP004289
I
0.822
Sakowv30011253m.g
Saccoglossus kowalevskii
Sakowv30011253m.g
I
0.821
AATE019032
Anopheles atroparvus
AATE019032
I
0.821
ACYPI53909
Acyrthosiphon pisum
ACYPI53909
I
0.806
AMAM022755
Anopheles maculatus
AMAM022755
I
0.798
MCINX015151
Melitaea cinxia
MCINX015151
I
0.793
tetur01g15740
Tetranychus urticae
tetur01g15740
I
0.779
LLOJ009256
Lutzomyia longipalpis
LLOJ009256
I
0.776
GB55405
Apis mellifera
GB55405
I
0.718