CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GH24002
(
Drosophila grimshawi
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0131459
T237570_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD
HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.706
0.706
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD
HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.706
0.706
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN
NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.706
0.706
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0157908
Paired box
100
222
CHSGVNQLGGVFVGGRPLPDSTRQKIVELAHSGARPCDISRILQVSNGCVSKILGRDEMVAEYRFERNFTVRISSKREWTTLDKVHPLKPHTIKWYTDRSLTNHGTGLGDVGPRVSSINRVLR
FBpp0157908
Homeodomain
497
553
QRNRTSFTNEQIDSLEKEFERTHYPDVFARERLAGKIGLPEARIQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Drosophila grimshawi
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy