CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GJ13265
(
Drosophila virilis
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0200491
T237594_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.988
0.988
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
0.859
0.859
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
0.859
0.859
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0227682
Paired box
64
172
TGSTLGALMSQHRLLEFSRFGGLRGYDIAQHMLTQQGAVSKLLGSLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILR
FBpp0227682
Homeodomain
300
356
RRNRTTFSPEQLEELEKEFDKSHYPCVSTRERLSSRTSLSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Drosophila virilis
TFs
40 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GI12327
Drosophila mojavensis
FBgn0135084
I
1.000
GH16064
Drosophila grimshawi
FBgn0123535
I
1.000
GG13831
Drosophila erecta
FBgn0106094
I
0.988
GL24956
Drosophila persimilis
FBgn0162543
I
0.988
GM24656
Drosophila sechellia
FBgn0179519
I
0.988
GD12719
Drosophila simulans
FBgn0184446
I
0.988
GK12628
Drosophila willistoni
FBgn0214637
I
0.988
GE20121
Drosophila yakuba
FBgn0237444
I
0.988
eyg
Drosophila melanogaster
FBgn0000625
D
0.988
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.988
GF24979
Drosophila ananassae
FBgn0101971
I
0.982
LCUP004289
Lucilia cuprina
LCUP004289
I
0.939
MDOA004637
Musca domestica
MDOA004637
I
0.926
AGAP011417
Anopheles gambiae
AGAP011417
I
0.908
AATE019032
Anopheles atroparvus
AATE019032
I
0.886
GI12329
Drosophila mojavensis
FBgn0135086
I
0.877
TC007194
Tribolium castaneum
TC007194
I
0.871
PHUM427950
Pediculus humanus
PHUM427950
I
0.871
GH16065
Drosophila grimshawi
FBgn0123536
I
0.871
KGM_15291
Danaus plexippus
KGM_15291
I
0.865
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.865
GG13832
Drosophila erecta
FBgn0106095
I
0.864
GE20122
Drosophila yakuba
FBgn0237445
I
0.864
LCUP004290
Lucilia cuprina
LCUP004290
I
0.859
MDOA006963
Musca domestica
MDOA006963
I
0.859
GD12721
Drosophila simulans
FBgn0184448
I
0.859
GF24980
Drosophila ananassae
FBgn0101972
I
0.859
toe
Drosophila melanogaster
FBgn0036285
D
0.859
GM24657
Drosophila sechellia
FBgn0179520
I
0.859
GJ13266
Drosophila virilis
FBgn0200492
I
0.858
HMEL010417
Heliconius melpomene
HMEL010417
I
0.848
AMAM022755
Anopheles maculatus
AMAM022755
I
0.840
LLOJ009256
Lutzomyia longipalpis
LLOJ009256
I
0.785
GK12629
Drosophila willistoni
FBgn0214638
I
0.779
ACYPI53909
Acyrthosiphon pisum
ACYPI53909
I
0.767
GB55405
Apis mellifera
GB55405
I
0.748
NV12005
Nasonia vitripennis
NV12005
I
0.718
DAPPUDRAFT_253988
Daphnia pulex
DAPPUDRAFT_253988
I
0.712
Sakowv30011253m.g
Saccoglossus kowalevskii
Sakowv30011253m.g
I
0.712
ACEP19922
Atta cephalotes
ACEP19922
I
0.707