GE14563 (Drosophila yakuba)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
FBgn0232162 T237611_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
toy
M03899_2.00
Drosophila melanogaster
TTYACGCWTGASTGMACAN

NTGTKCASTCAWGCGTRAA
SELEX
Nitta et al.(2015)
toy_1
1.000 1.000
toy
M03900_2.00
Drosophila melanogaster
NTYACGCWTSAVTGMRCNN

NNGYKCABTSAWGCGTRAN
SELEX
Nitta et al.(2015)
toy_2
1.000 1.000
toy
M03901_2.00
Drosophila melanogaster
VATTANBHAYGSWYSRN

NYSRWSCRTDVNTAATB
SELEX
Nitta et al.(2015)
toy_3
1.000 1.000
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD

HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.912 0.912
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD

HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.912 0.912
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN

NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.912 0.912
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
0.907 0.907
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
0.907 0.907
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
0.907 0.907
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
0.907 0.907
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
0.907 0.907
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
0.907 0.907
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
0.907 0.907
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
0.907 0.907
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
0.907 0.907
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
0.907 0.907
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
0.907 0.907
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
0.907 0.907
PAX6
M00335_2.00
Homo sapiens
BRNNNNNN

NNNNNNYV
PBM
Barrera et al.(2016)
PAX6_A79E
0.901 0.901
PAX6
M00336_2.00
Homo sapiens
RTGCACAC

GTGTGCAY
PBM
Barrera et al.(2016)
PAX6_F258S
0.901 0.901
PAX6
M00337_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
PAX6_P118R
0.901 0.901
PAX6
M00338_2.00
Homo sapiens
WSGVRVDR

YHBYBCSW
PBM
Barrera et al.(2016)
PAX6_P68S
0.901 0.901
PAX6
M00339_2.00
Homo sapiens
NNNNSGKVGGHNN

NNDCCBMCSNNNN
PBM
Barrera et al.(2016)
PAX6_R128C
0.901 0.901
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.901 0.901
PAX6
M00341_2.00
Homo sapiens
BTSCCCSGSC

GSCSGGGSAV
PBM
Barrera et al.(2016)
PAX6_R26G
0.901 0.901
PAX6
M00343_2.00
Homo sapiens
NNNNCCCVKCNBN

NVNGMBGGGNNNN
PBM
Barrera et al.(2016)
PAX6_S119R
0.901 0.901
PAX6
M00344_2.00
Homo sapiens
NNMSASGBYNNN

NNNRVCSTSKNN
PBM
Barrera et al.(2016)
PAX6_V126D
0.901 0.901
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0259573 Paired box 29 153
FBpp0259573 Homeodomain 266 322

Links

Other Homeodomain,Paired box family TFs
Other Drosophila yakuba TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R007260 Calypte anna Aan_R007260 I 0.000
Afo_R005310 Aptenodytes forsteri Afo_R005310 I 0.000
Alligator_sinensis_CCG003098.5 Alligator sinensis Alligator_sinensis_CCG003098.5 I 0.000
Cmyd_10014807 Chelonia mydas Cmyd_10014807 I 0.000
ENSAMEG00000015241 Ailuropoda melanoleuca ENSAMEG00000015241 I 0.000
ENSAPLG00000005397 Anas platyrhynchos ENSAPLG00000005397 I 0.000
GTF2I Bos taurus ENSBTAG00000009780 I 0.000
ENSBTAP00000012902-D1 Bos grunniens ENSBTAP00000012902-D1 I 0.000
GTF2I Canis familiaris ENSCAFG00000011514 I 0.000
GTF2I Callithrix jacchus ENSCJAG00000016182 I 0.000
GTF2I Cavia porcellus ENSCPOG00000004071 I 0.000
ENSCSAG00000018227 Chlorocebus sabaeus ENSCSAG00000018227 I 0.000
ENSDNOG00000000823 Dasypus novemcinctus ENSDNOG00000000823 I 0.000
GTF2I Equus caballus ENSECAG00000020289 I 0.000
ENSFALG00000007065 Ficedula albicollis ENSFALG00000007065 I 0.000
GTF2I Felis catus ENSFCAG00000002617 I 0.000
GTF2I Homo sapiens ENSG00000263001 D 0.000
GTF2I Gallus gallus ENSGALG00000021665 I 0.000
ENSLACG00000018432 Latimeria chalumnae ENSLACG00000018432 I 0.000
GTF2I Loxodonta africana ENSLAFG00000003646 I 0.000
GTF2I Meleagris gallopavo ENSMGAG00000002373 I 0.000
GTF2I Myotis lucifugus ENSMLUG00000002844 I 0.000
GTF2I Macaca mulatta ENSMMUG00000006823 I 0.000
GTF2I Monodelphis domestica ENSMODG00000007022 I 0.000
ENSMPUG00000016156 Mustela putorius furo ENSMPUG00000016156 I 0.000
Gtf2i Mus musculus ENSMUSG00000060261 I 0.000
ENSNLEG00000008741 Nomascus leucogenys ENSNLEG00000008741 I 0.000
GTF2I Ornithorhynchus anatinus ENSOANG00000012919 I 0.000
ENSOARG00000011276 Ovis aries ENSOARG00000011276 I 0.000
GTF2I Oryctolagus cuniculus ENSOCUG00000002063 I 0.000
ENSP00000322542 Macaca fascicularis ENSP00000322542 I 0.000
ENSPANG00000010876 Papio anubis ENSPANG00000010876 I 0.000
ENSPPYG00000017484 Pongo abelii ENSPPYG00000017484 I 0.000
ENSPSIG00000011811 Pelodiscus sinensis ENSPSIG00000011811 I 0.000
GTF2I Pan troglodytes ENSPTRG00000019293 I 0.000
GTF2I Pteropus vampyrus ENSPVAG00000005365 I 0.000
Gtf2i Rattus norvegicus ENSRNOG00000001479 I 0.000
GTF2I Sorex araneus ENSSARG00000011458 I 0.000
GTF2I Sus scrofa ENSSSCG00000007721 I 0.000
GTF2I Taeniopygia guttata ENSTGUG00000003714 I 0.000
GTF2I Tursiops truncatus ENSTTRG00000014454 I 0.000
GTF2I Vicugna pacos ENSVPAG00000008515 I 0.000
Gfo_R013538 Geospiza fortis Gfo_R013538 I 0.000
Myotis_brandtii_GTF2I_10014287 Myotis brandtii Myotis_brandtii_GTF2I_10014287 I 0.000
Pvit_17518 Pogona vitticeps Pvit_17518 I 0.000
Tal_R004165 Tyto alba Tal_R004165 I 0.000
gtf2i.S Xenopus laevis XB-GENE-1217444 I 0.000
XP_002932326 Xenopus tropicalis XP_002932326 I 0.000