CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL010417
(
Heliconius melpomene
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
HMEL010417
T237626_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.848
0.848
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
0.842
0.842
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL010417-PA
Paired box
50
158
GASHPLSSLLSQQRLLELSRFGLRHYDIAHHVLSQQGAVTKLLGTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILR
HMEL010417-PA
Homeodomain
250
306
RRNRTTFSPDQLEELEKEFEKSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Heliconius melpomene
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
KGM_15291
Danaus plexippus
KGM_15291
I
0.988
TC007194
Tribolium castaneum
TC007194
I
0.945
PHUM427950
Pediculus humanus
PHUM427950
I
0.933
AGAP011417
Anopheles gambiae
AGAP011417
I
0.897
LCUP004290
Lucilia cuprina
LCUP004290
I
0.885
MDOA006963
Musca domestica
MDOA006963
I
0.873
GI12329
Drosophila mojavensis
FBgn0135086
I
0.867
GA23573
Drosophila pseudoobscura
FBgn0244973
I
0.861
GF24979
Drosophila ananassae
FBgn0101971
I
0.861
LCUP004289
Lucilia cuprina
LCUP004289
I
0.855
GH16065
Drosophila grimshawi
FBgn0123536
I
0.855
MDOA004637
Musca domestica
MDOA004637
I
0.855
GF24980
Drosophila ananassae
FBgn0101972
I
0.855
GJ13265
Drosophila virilis
FBgn0200491
I
0.848
GE20121
Drosophila yakuba
FBgn0237444
I
0.848
GJ13266
Drosophila virilis
FBgn0200492
I
0.848
eyg
Drosophila melanogaster
FBgn0000625
D
0.848
GK12628
Drosophila willistoni
FBgn0214637
I
0.848
GL24956
Drosophila persimilis
FBgn0162543
I
0.848
GH16064
Drosophila grimshawi
FBgn0123535
I
0.848
GG13831
Drosophila erecta
FBgn0106094
I
0.848
GI12327
Drosophila mojavensis
FBgn0135084
I
0.848
GA10346
Drosophila pseudoobscura
FBgn0070404
I
0.848
GM24656
Drosophila sechellia
FBgn0179519
I
0.848
GE20122
Drosophila yakuba
FBgn0237445
I
0.842
GM24657
Drosophila sechellia
FBgn0179520
I
0.842
GG13832
Drosophila erecta
FBgn0106095
I
0.842
toe
Drosophila melanogaster
FBgn0036285
D
0.842
GD12721
Drosophila simulans
FBgn0184448
I
0.842
GD12719
Drosophila simulans
FBgn0184446
I
0.836
ACYPI53909
Acyrthosiphon pisum
ACYPI53909
I
0.830
GK12629
Drosophila willistoni
FBgn0214638
I
0.776
GB55405
Apis mellifera
GB55405
I
0.764
NV12005
Nasonia vitripennis
NV12005
I
0.764
LLOJ009256
Lutzomyia longipalpis
LLOJ009256
I
0.764
ACEP19922
Atta cephalotes
ACEP19922
I
0.718
DAPPUDRAFT_253988
Daphnia pulex
DAPPUDRAFT_253988
I
0.712
Sakowv30011253m.g
Saccoglossus kowalevskii
Sakowv30011253m.g
I
0.703