CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMEL010417
(
Heliconius melpomene
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
HMEL010417
T237626_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg
M03887_2.00
Drosophila melanogaster
NDTAATCGATTAHN
NDTAATCGATTAHN
SELEX
Nitta et al.(2015)
eyg_1
0.848
0.848
toe
M03902_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_1
0.842
0.842
toe
M03903_2.00
Drosophila melanogaster
NTAATYGATTAN
NTAATCRATTAN
SELEX
Nitta et al.(2015)
toe_2
0.842
0.842
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HMEL010417-PA
Paired box
50
158
GASHPLSSLLSQQRLLELSRFGLRHYDIAHHVLSQQGAVTKLLGTLRPPGLIGGSKPKVATPAVVSKIEQYKRENPTIFAWEIRERLISEGVCTNATAPSVSSINRILR
HMEL010417-PA
Homeodomain
250
306
RRNRTTFSPDQLEELEKEFEKSHYPCVSTRERLASKTSLSEARVQVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Heliconius melpomene
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy