tetur07g04480 (Tetranychus urticae)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		tetur07g04480 T237673_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Pax7
M00541_2.00 		Mus musculus
NNVATTWN
NWAATBNN		 PBM
Berger et al.(2008)
Pax7_3783 		0.783 0.783
PAX7
M03292_2.00 		Homo sapiens
WAATYRATTA
TAATYRATTW		 SELEX
Jolma et al.(2013)
PAX7_1 		0.783 0.783
PAX7
M03293_2.00 		Homo sapiens
TAATYGATTA
TAATCRATTA		 SELEX
Jolma et al.(2013)
PAX7_2 		0.783 0.783
PAX7
M05416_2.00 		Homo sapiens
NDSCGTGACGAATYR
YRATTCGTCACGSHN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1 		0.783 0.783
PAX7
M05417_2.00 		Homo sapiens
NSGTCACGSHWRTTAN
NTAAYWDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2 		0.783 0.783
PAX7
M05418_2.00 		Homo sapiens
NNAATCRATTWN
NWAATYGATTNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3 		0.783 0.783
PAX7
M05422_2.00 		Homo sapiens
BVATTMGTCACGSHN
NDSCGTGACKAATBV		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1 		0.783 0.783
PAX7
M05423_2.00 		Homo sapiens
NSGTCACGSYWATTAN
NTAATWRSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2 		0.783 0.783
PAX7
M05424_2.00 		Homo sapiens
NTAATYGATTAN
NTAATCRATTAN		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3 		0.783 0.783
PAX7
M05874_2.00 		Homo sapiens
ATTMGTYACGSHN
NDSCGTRACKAAT		 SMiLE-seq
Isakova et al.(2017)
PAX7 		0.783 0.783
Pax7
M09586_2.00 		Mus musculus
NNNNNYAATTDNNHAATTAN
NTAATTDNNHAATTRNNNNN		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1 		0.783 0.783
Pax7
M09587_2.00 		Mus musculus
DTAATYDGATTA
TAATCHRATTAH		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2 		0.783 0.783
Pax7
M09588_2.00 		Mus musculus
TAATTGATTW
WAATCAATTA		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3 		0.783 0.783
PAX7
M05419_2.00 		Homo sapiens
NVATTVGTCRCGSYN
NRSCGYGACBAATBN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1 		0.783 0.783
PAX7
M05420_2.00 		Homo sapiens
NNGTCACGSHHRTTAN
NTAAYDDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2 		0.783 0.783
PAX7
M05421_2.00 		Homo sapiens
NNAATCRATTWN
NWAATYGATTNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3 		0.783 0.783
PAX7
M05425_2.00 		Homo sapiens
YRATTMGTCACGSHN
NDSCGTGACKAATYR		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1 		0.783 0.783
PAX7
M05426_2.00 		Homo sapiens
NSGTCACGSYWATTAN
NTAATWRSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2 		0.783 0.783
PAX7
M05427_2.00 		Homo sapiens
NTAATYGATTAN
NTAATCRATTAN		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3 		0.783 0.783
prd
M03894_2.00 		Drosophila melanogaster
VATTVGTCACGS
SCGTGACBAATB		 SELEX
Nitta et al.(2015)
prd_1 		0.777 0.777
prd
M03895_2.00 		Drosophila melanogaster
NRATCRATYN
NRATYGATYN		 SELEX
Nitta et al.(2015)
prd_2 		0.777 0.777
prd
M06555_2.00 		Drosophila melanogaster
HSWAACNGH
DCNGTTWSD		 B1H
Mathelier et al.(2014)
MA0239.1 		0.777 0.777
prd
M09684_2.00 		Drosophila melanogaster
HMVNTHHKWMACGS
SCGTKWMDDANBKD		 Misc
Kulakovskiy et al.(2009)
prd 		0.777 0.777
prd
M10818_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$PRD_Q6 		0.777 0.777
gsb-n
M03888_2.00 		Drosophila melanogaster
SCGTRWCKAATB
VATTMGWYACGS		 SELEX
Nitta et al.(2015)
gsb-n_1 		0.771 0.771
PAX3
M00358_2.00 		Homo sapiens
NRTNNNN
NNNNAYN		 PBM
Barrera et al.(2016)
PAX3_REF 		0.765 0.765
PAX3
M03297_2.00 		Homo sapiens
TAATYRATTA
TAATYRATTA		 SELEX
Jolma et al.(2013)
PAX3_1 		0.765 0.765
PAX3
M03885_2.00 		Homo sapiens
NNTAATYGATTANN
NNTAATCRATTANN		 SELEX
Nitta et al.(2015)
PAX3_1 		0.765 0.765
PAX3
M03886_2.00 		Homo sapiens
RATTMGTCACGST
ASCGTGACKAATY		 SELEX
Nitta et al.(2015)
PAX3_2 		0.765 0.765
PAX3
M05438_2.00 		Homo sapiens
NSGTCACGSHHATTAN
NTAATDDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1 		0.765 0.765
PAX3
M05439_2.00 		Homo sapiens
NDAATCRATTMN
NKAATYGATTHN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2 		0.765 0.765
PAX3
M05440_2.00 		Homo sapiens
NBRATTMGTCACGSHN
NDSCGTGACKAATYVN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3 		0.765 0.765
PAX3
M09585_2.00 		Homo sapiens
WSYRTGACWAATBNN
NNVATTWGTCAYRSW		 Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063 		0.765 0.765
PAX3
M10816_2.00 		Homo sapiens
TCGTCACRCHYHM
KDRDGYGTGACGA		 Transfac
Matys et al.(2006)
V$PAX3_01 		0.765 0.765
PAX3
M10817_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX3_B 		0.765 0.765
PAX3
M05441_2.00 		Homo sapiens
NNGTCACGSHWRTTAN
NTAAYWDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1 		0.765 0.765
PAX3
M05442_2.00 		Homo sapiens
NWAATCRATTAN
NTAATYGATTWN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2 		0.765 0.765
PAX3
M05443_2.00 		Homo sapiens
NNRATTVGTCRCGSHN
NDSCGYGACBAATYNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3 		0.765 0.765
PAX3
M00352_2.00 		Homo sapiens
VNTAATYR
YRATTANB		 PBM
Barrera et al.(2016)
PAX3_G48R 		0.759 0.759
PAX3
M00353_2.00 		Homo sapiens
NNNNRTNNN
NNNAYNNNN		 PBM
Barrera et al.(2016)
PAX3_N47H 		0.759 0.759
PAX3
M00354_2.00 		Homo sapiens
NNNRYNN
NNRYNNN		 PBM
Barrera et al.(2016)
PAX3_N47K 		0.759 0.759
PAX3
M00355_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_P50L 		0.759 0.759
PAX3
M00356_2.00 		Homo sapiens
NNKWCAYDDWN
NWHHRTGWMNN		 PBM
Barrera et al.(2016)
PAX3_R270C 		0.759 0.759
PAX3
M00357_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_R56L 		0.759 0.759
PAX3
M00359_2.00 		Homo sapiens
NTAATYRV
BYRATTAN		 PBM
Barrera et al.(2016)
PAX3_Y90H 		0.759 0.759
gsb
M03889_2.00 		Drosophila melanogaster
RATTMGTCACGSN
NSCGTGACKAATY		 SELEX
Nitta et al.(2015)
gsb_1 		0.729 0.729
gsb
M03890_2.00 		Drosophila melanogaster
NNNAATCRATTWNN
NNWAATYGATTNNN		 SELEX
Nitta et al.(2015)
gsb_2 		0.729 0.729
gsb
M03891_2.00 		Drosophila melanogaster
RTBDMTAATTGATTD
HAATCAATTAKHVAY		 SELEX
Nitta et al.(2015)
gsb_3 		0.729 0.729
gsb
M03892_2.00 		Drosophila melanogaster
NNTAATYGATTANN
NNTAATCRATTANN		 SELEX
Nitta et al.(2015)
gsb_4 		0.729 0.729
gsb
M03893_2.00 		Drosophila melanogaster
NSCGTGACKAATBV
BVATTMGTCACGSN		 SELEX
Nitta et al.(2015)
gsb_5 		0.729 0.729
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
tetur07g04480.1 Paired box 28 136
tetur07g04480.1 Homeodomain 195 251

Links

Other Homeodomain,Paired box family TFs
Other Tetranychus urticae TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAX7 Choloepus hoffmanni ENSCHOG00000005130 I 0.924
ENSVPAG00000012251 Vicugna pacos ENSVPAG00000012251 I 0.924
Gfo_R008876 Geospiza fortis Gfo_R008876 I 0.845
Afo_R000224 Aptenodytes forsteri Afo_R000224 I 0.838
PAX3 Takifugu rubripes ENSTRUG00000013444 I 0.832
ENSGALG00000005246 Gallus gallus ENSGALG00000005246 I 0.821
ACYPI002777 Acyrthosiphon pisum ACYPI002777 I 0.819
CGI_10026438 Crassostrea gigas CGI_10026438 I 0.807
CLEC002253 Cimex lectularius CLEC002253 I 0.801
Cflo_07008--XP_394847.3_APIME Camponotus floridanus Cflo_07008--XP_394847.3_APIME I 0.801
pax3.S Xenopus laevis XB-GENE-482744 I 0.798
ENSONIG00000014283 Oreochromis niloticus ENSONIG00000014283 I 0.789
pax7a Tetraodon nigroviridis ENSTNIG00000014797 I 0.789
PAX7 Gasterosteus aculeatus ENSGACG00000001703 I 0.789
ENSLOCG00000003864 Lepisosteus oculatus ENSLOCG00000003864 I 0.789
ENSGMOG00000001549 Gadus morhua ENSGMOG00000001549 I 0.789
PAX7 Oryzias latipes ENSORLG00000004269 I 0.789
pax3.L Xenopus laevis XB-GENE-6252072 I 0.789
pax7a Danio rerio ENSDARG00000100398 I 0.789
ENSPFOG00000013988 Poecilia formosa ENSPFOG00000013988 I 0.789
pax7a Gasterosteus aculeatus ENSGACG00000012890 I 0.789
pax3 Xenopus tropicalis XB-GENE-482740 I 0.789
pax7a Takifugu rubripes ENSTRUG00000015245 I 0.789
ENSAMXG00000024811 Astyanax mexicanus ENSAMXG00000024811 I 0.789
ENSAMXG00000003799 Astyanax mexicanus ENSAMXG00000003799 I 0.789
pax7b Danio rerio ENSDARG00000070818 I 0.789
ENSXMAG00000012884 Xiphophorus maculatus ENSXMAG00000012884 I 0.783
ENSPFOG00000016934 Poecilia formosa ENSPFOG00000016934 I 0.777
ACYPI004907 Acyrthosiphon pisum ACYPI004907 I 0.777
ENSCSAG00000000870 Chlorocebus sabaeus ENSCSAG00000000870 I 0.777
Cflo_06472--XP_394847.3_APIME Camponotus floridanus Cflo_06472--XP_394847.3_APIME I 0.771
ASIS005037 Anopheles sinensis ASIS005037 I 0.771
DAPPUDRAFT_15023 Daphnia pulex DAPPUDRAFT_15023 I 0.771
ENSLACG00000006342 Latimeria chalumnae ENSLACG00000006342 I 0.765
Pvit_18803 Pogona vitticeps Pvit_18803 I 0.765
GA19807 Drosophila pseudoobscura FBgn0079803 I 0.765
ADAC005776 Anopheles darlingi ADAC005776 I 0.765
AMAM004970 Anopheles maculatus AMAM004970 I 0.765
pax3a Danio rerio ENSDARG00000010192 I 0.765
ENSPSIG00000005535 Pelodiscus sinensis ENSPSIG00000005535 I 0.765
PAX3 Anolis carolinensis ENSACAG00000004981 I 0.765
Hsal_08388--XP_394847.3_APIME Harpegnathos saltator Hsal_08388--XP_394847.3_APIME I 0.759
ACHR003306 Anopheles christyi ACHR003306 I 0.759
BGIBMGA009025 Bombyx mori BGIBMGA009025 I 0.759
ENSGMOG00000006159 Gadus morhua ENSGMOG00000006159 I 0.759
PAX7 Microcebus murinus ENSMICG00000016256 I 0.751
Hsal_08389--XP_394848.3_APIME Harpegnathos saltator Hsal_08389--XP_394848.3_APIME I 0.747
PAX3 Tetraodon nigroviridis ENSTNIG00000015279 I 0.747
MDOA002110 Musca domestica MDOA002110 I 0.747
PAX7 Sorex araneus ENSSARG00000008062 I 0.744
GB54180 Apis mellifera GB54180 I 0.742
PPAI006228 Phlebotomus papatasi PPAI006228 I 0.742
LLOJ009941 Lutzomyia longipalpis LLOJ009941 I 0.742
DAPPUDRAFT_45999 Daphnia pulex DAPPUDRAFT_45999 I 0.741
ENSGMOG00000013066 Gadus morhua ENSGMOG00000013066 I 0.741
MDOA004461 Musca domestica MDOA004461 I 0.736
HelroG92410 Helobdella robusta HelroG92410 I 0.736
TC015804 Tribolium castaneum TC015804 I 0.736
PAX3 Echinops telfairi ENSETEG00000006800 I 0.734
PAX3 Tursiops truncatus ENSTTRG00000000379 I 0.734
ISCW014979 Ixodes scapularis ISCW014979 I 0.731
GL17644 Drosophila persimilis FBgn0155247 I 0.729
GJ21022 Drosophila virilis FBgn0208157 I 0.729
GH22657 Drosophila grimshawi FBgn0130115 I 0.729
PAX7 Meleagris gallopavo ENSMGAG00000005870 I 0.726
SINV13311 Solenopsis invicta SINV13311 I 0.725
ENSONIG00000001596 Oreochromis niloticus ENSONIG00000001596 I 0.725
PHUM134580 Pediculus humanus PHUM134580 I 0.725
NV18360 Nasonia vitripennis NV18360 I 0.725
DAPPUDRAFT_265088 Daphnia pulex DAPPUDRAFT_265088 I 0.720
GD24898 Drosophila simulans FBgn0196214 I 0.715
GG19864 Drosophila erecta FBgn0112065 I 0.715
GE11387 Drosophila yakuba FBgn0229199 I 0.715
GI18478 Drosophila mojavensis FBgn0141217 I 0.715
GM11765 Drosophila sechellia FBgn0166708 I 0.715
gsb-n Drosophila melanogaster FBgn0001147 D 0.715
Aan_R006049 Calypte anna Aan_R006049 I 0.714
Myotis_brandtii_Pax7_10009014 Myotis brandtii Myotis_brandtii_Pax7_10009014 I 0.714
ENSBTAP00000019924-D1 Bos grunniens ENSBTAP00000019924-D1 I 0.714
ENSP00000364524 Macaca fascicularis ENSP00000364524 I 0.714
HMEL015048 Heliconius melpomene HMEL015048 I 0.714
KGM_11699 Danaus plexippus KGM_11699 I 0.714
SINV15888 Solenopsis invicta SINV15888 I 0.714
Pvit_06262 Pogona vitticeps Pvit_06262 I 0.714
Afo_R012987 Aptenodytes forsteri Afo_R012987 I 0.714
ENSPPYG00000001801 Pongo abelii ENSPPYG00000001801 I 0.714
ENSMEUG00000001822 Macropus eugenii ENSMEUG00000001822 I 0.714
PAX7 Loxodonta africana ENSLAFG00000011762 I 0.714
PAX7 Gorilla gorilla ENSGGOG00000004213 I 0.714
PAX7 Macaca mulatta ENSMMUG00000017444 I 0.714
ENSMPUG00000016202 Mustela putorius furo ENSMPUG00000016202 I 0.714
ENSNLEG00000007812 Nomascus leucogenys ENSNLEG00000007812 I 0.714
Pax7 Mus musculus ENSMUSG00000028736 D 0.714
ENSGALG00000003782 Gallus gallus ENSGALG00000003782 I 0.714
PAX7 Homo sapiens ENSG00000009709 D 0.714
PAX7 Canis familiaris ENSCAFG00000015539 I 0.714
PAX7 Bos taurus ENSBTAG00000014967 I 0.714
ENSAMEG00000017082 Ailuropoda melanoleuca ENSAMEG00000017082 I 0.714
PAX7 Callithrix jacchus ENSCJAG00000007521 I 0.714
PAX7 Cavia porcellus ENSCPOG00000014574 I 0.714
PAX7 Felis catus ENSFCAG00000008765 I 0.714
PAX7 Dasypus novemcinctus ENSDNOG00000007584 I 0.714
PAX7 Otolemur garnettii ENSOGAG00000016376 I 0.714
ENSONIG00000014632 Oreochromis niloticus ENSONIG00000014632 I 0.714
ENSSTOG00000020868 Ictidomys tridecemlineatus ENSSTOG00000020868 I 0.714
fgenesh2_kg.scaffold_211000002 Branchiostoma floridae fgenesh2_kg.scaffold_211000002 I 0.714
ENSTSYG00000009638 Tarsius syrichta ENSTSYG00000009638 I 0.714
PAX7 Tursiops truncatus ENSTTRG00000004465 I 0.714
fgenesh2_kg.scaffold_259000002 Branchiostoma floridae fgenesh2_kg.scaffold_259000002 I 0.714
Pax7 Rattus norvegicus ENSRNOG00000018739 I 0.714
ENSSHAG00000005424 Sarcophilus harrisii ENSSHAG00000005424 I 0.714
pax7.L Xenopus laevis XB-GENE-865678 I 0.714
PAX7 Pan troglodytes ENSPTRG00000000253 I 0.714
pax7 Xenopus tropicalis XB-GENE-487140 I 0.714
GF11512 Drosophila ananassae FBgn0088552 I 0.710
GH23137 Drosophila grimshawi FBgn0130594 I 0.710
GA15432 Drosophila pseudoobscura FBgn0075449 I 0.710
GL16831 Drosophila persimilis FBgn0154435 I 0.710
GJ21339 Drosophila virilis FBgn0208469 I 0.710
GK21727 Drosophila willistoni FBgn0223712 I 0.710
ENSXMAG00000008304 Xiphophorus maculatus ENSXMAG00000008304 I 0.709
GG10275 Drosophila erecta FBgn0102584 I 0.709
GM26340 Drosophila sechellia FBgn0181193 I 0.709
prd Drosophila melanogaster FBgn0003145 D 0.709
tetur29g00530 Tetranychus urticae tetur29g00530 I 0.709
ENSLACG00000019159 Latimeria chalumnae ENSLACG00000019159 I 0.709
ENSPFOG00000007769 Poecilia formosa ENSPFOG00000007769 I 0.709
GD22133 Drosophila simulans FBgn0193543 I 0.709
ENSPFOG00000014283 Poecilia formosa ENSPFOG00000014283 I 0.709
GK21081 Drosophila willistoni FBgn0223073 I 0.709
GB43792 Apis mellifera GB43792 I 0.709
TC006788 Tribolium castaneum TC006788 I 0.709
GE12435 Drosophila yakuba FBgn0230178 I 0.709
TC005342 Tribolium castaneum TC005342 I 0.704
HMEL015047 Heliconius melpomene HMEL015047 I 0.704
GB43794 Apis mellifera GB43794 I 0.704
AFUN002669 Anopheles funestus AFUN002669 I 0.703
AFAF003749 Anopheles farauti AFAF003749 I 0.703
ENSOARG00000010587 Ovis aries ENSOARG00000010587 I 0.703
AMIN006552 Anopheles minimus AMIN006552 I 0.703
AEPI009865 Anopheles epiroticus AEPI009865 I 0.703
AGAP010358 Anopheles gambiae AGAP010358 I 0.703
PAX3 Erinaceus europaeus ENSEEUG00000012346 I 0.703
pax3b Gasterosteus aculeatus ENSGACG00000014017 I 0.703
AATE003551 Anopheles atroparvus AATE003551 I 0.703
ENSXMAG00000015270 Xiphophorus maculatus ENSXMAG00000015270 I 0.703
GF23439 Drosophila ananassae FBgn0100433 I 0.703
ADIR009744 Anopheles dirus ADIR009744 I 0.703
PAX3 Tetraodon nigroviridis ENSTNIG00000014313 I 0.703
ENSONIG00000010028 Oreochromis niloticus ENSONIG00000010028 I 0.703
PAX3 Oryzias latipes ENSORLG00000009031 I 0.703
AALB001247 Anopheles albimanus AALB001247 I 0.703
PAX3 Takifugu rubripes ENSTRUG00000009198 I 0.702
PAX3 Dasypus novemcinctus ENSDNOG00000001871 I 0.702