CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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eyg-1
(
Caenorhabditis elegans
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
WBGene00013147
T237680_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
eyg-1
M00680_2.00
Caenorhabditis elegans
NNTAATYNN
NNRATTANN
PBM
Narasimhan et al.(2015)
pTH10787
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00680_2.00
Paired box
18
101
AHNTMGKMTRRTSQSDGGKPSGNSNAAGGAGTKPKVATPQVVAKIEQYKRDNPTIFAWEIREKLISEDVCTTPPSVSSINRILR
M00680_2.00
Homeodomain
204
260
RLSRSTFTNEQLQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQVWFSNRRAKWRK
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Y53C12C.1
Paired box
18
101
AHNTMGKMTRRTSQSDGGKPSGNSNAAGGAGTKPKVATPQVVAKIEQYKRDNPTIFAWEIREKLISEDVCTTPPSVSSINRILR
Y53C12C.1
Homeodomain
204
260
RLSRSTFTNEQLQSLEEVFLRDPYPSPNERADLVKRTNLPEARIQVWFSNRRAKWRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Caenorhabditis elegans
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBG01026
Caenorhabditis briggsae
CBG01026
I
0.844
CRE07683
Caenorhabditis remanei
CRE07683
I
0.844
ASU_08722
Ascaris suum
ASU_08722
I
0.708
L892_g3679
Steinernema scapterisci
L892_g3679
I
0.702