CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10003254
(
Chelonia mydas
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
Cmyd_10003254
T237698_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10003254
Paired box
99
194
ARRRSQLKPETCSTKVSNGCVSKILGRYYQTGAVEPKAIGGSKPRMVTPEVVARISQLKLEHPSIFAWEIRRKLHSEGICASDRTPSVSSINRVLR
Cmyd_10003254
Homeodomain
215
255
PEFQRGQYPDSATREKLASATQLPDTTIRVWFSNRRAKWRR
Links
Other
Homeodomain,Paired box
family TFs
Other
Chelonia mydas
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Afo_R008534
Aptenodytes forsteri
Afo_R008534
I
0.781
Alligator_sinensis_CCG000926.1
Alligator sinensis
Alligator_sinensis_CCG000926.1
I
0.772
PAX4
Oryctolagus cuniculus
ENSOCUG00000001612
I
0.701
PAX4
Gorilla gorilla
ENSGGOG00000002555
I
0.701
PAX4
Cavia porcellus
ENSCPOG00000006244
I
0.701
PAX4
Callithrix jacchus
ENSCJAG00000017652
I
0.701