Myotis_brandtii_Pax4_10010526 (Myotis brandtii)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
Myotis_brandtii_Pax4_10010526 T237721_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
PAX4
M00350_2.00
Homo sapiens
NNNATTAN

NTAATNNN
PBM
Barrera et al.(2016)
PAX4_REF
0.940 0.940
PAX4
M00351_2.00
Homo sapiens
NNNATTAN

NTAATNNN
PBM
Barrera et al.(2016)
PAX4_REF_R3
0.940 0.940
Pax4
M00542_2.00
Mus musculus
NNNATTAN

NTAATNNN
PBM
Berger et al.(2008)
Pax4_3989
0.940 0.940
PAX4
M03295_2.00
Homo sapiens
HKAATTAR

YTAATTMD
SELEX
Jolma et al.(2013)
PAX4_1
0.940 0.940
PAX4
M03296_2.00
Homo sapiens
YKAATTAV

BTAATTMR
SELEX
Jolma et al.(2013)
PAX4_2
0.940 0.940
PAX4
M03883_2.00
Homo sapiens
SGTCACGCWTSRNTG

CANYSAWGCGTGACS
SELEX
Nitta et al.(2015)
PAX4_1
0.940 0.940
PAX4
M03884_2.00
Homo sapiens
NNAATTANYKAATDMV

BKHATTMRNTAATTNN
SELEX
Nitta et al.(2015)
PAX4_2
0.940 0.940
PAX4
M05430_2.00
Homo sapiens
NAATTANNNNNNVNTAATTN

NAATTANBNNNNNNTAATTN
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_1
0.940 0.940
PAX4
M05431_2.00
Homo sapiens
NRYTWYACGCWTSRNYRNNYV

BRNNYRNYSAWGCGTRWARYN
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_2
0.940 0.940
PAX4
M05432_2.00
Homo sapiens
NTYACGCWYSRNYKMVYN

NRBKMRNYSRWGCGTRAN
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_3
0.940 0.940
PAX4
M05433_2.00
Homo sapiens
WHACGSTMATTDR

YHAATKASCGTDW
SELEX
Yin et al.(2017)
PAX4_eDBD_HT-SELEX_4
0.940 0.940
PAX4
M10811_2.00
Homo sapiens
NVNBSNNYVCGCHTSAMBNCN

NGNVKTSADGCGBRNNSVNBN
Transfac
Matys et al.(2006)
V$PAX4_01
0.940 0.940
PAX4
M10812_2.00
Homo sapiens
NAHWAATTDVV

BBHAATTWDTN
Transfac
Matys et al.(2006)
V$PAX4_02
0.940 0.940
PAX4
M10813_2.00
Homo sapiens
NDNNHYCACCCB

VGGGTGRDNNHN
Transfac
Matys et al.(2006)
V$PAX4_03
0.940 0.940
PAX4
M10814_2.00
Homo sapiens
RRAAAWWRNNHHNVHHNVHVNNHHSAYHSB

VSDRTSDDNNBDBNDDBNDDNNYWWTTTYY
Transfac
Matys et al.(2006)
V$PAX4_04
0.940 0.940
PAX4
M10815_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX4_Q2
0.940 0.940
PAX4
M05434_2.00
Homo sapiens
NHATTANBTAATDN

NHATTAVNTAATDN
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_1
0.940 0.940
PAX4
M05435_2.00
Homo sapiens
VATTWYACGCWTSRNYDVNYN

NRNBHRNYSAWGCGTRWAATB
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_2
0.940 0.940
PAX4
M05436_2.00
Homo sapiens
HTYACGCWTSANYGMNYN

NRNKCRNTSAWGCGTRAD
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_3
0.940 0.940
PAX4
M05437_2.00
Homo sapiens
DHRYGCTAATTAN

NTAATTAGCRYDH
SELEX
Yin et al.(2017)
PAX4_eDBD_Methyl-HT-SELEX_4
0.940 0.940
PAX4
M00347_2.00
Homo sapiens
NNNATND

HNATNNN
PBM
Barrera et al.(2016)
PAX4_R183C
0.934 0.934
PAX4
M00348_2.00
Homo sapiens
NNDATTAN

NTAATHNN
PBM
Barrera et al.(2016)
PAX4_R192H
0.934 0.934
PAX4
M00349_2.00
Homo sapiens
NNNATTANN

NNTAATNNN
PBM
Barrera et al.(2016)
PAX4_R192S
0.934 0.934
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Myotis_brandtii_Pax4_10010526 Paired box 22 146
Myotis_brandtii_Pax4_10010526 Homeodomain 183 239

Links

Other Homeodomain,Paired box family TFs
Other Myotis brandtii TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000004648 Ailuropoda melanoleuca ENSAMEG00000004648 I 0.973
ENSAMEG00000006908 Ailuropoda melanoleuca ENSAMEG00000006908 I 0.703
Alligator_sinensis_CCG000926.1 Alligator sinensis Alligator_sinensis_CCG000926.1 I 0.724
Afo_R008534 Aptenodytes forsteri Afo_R008534 I 0.758
ENSAMXG00000013008 Astyanax mexicanus ENSAMXG00000013008 I 0.703
ENSBTAP00000042667-D1 Bos grunniens ENSBTAP00000042667-D1 I 0.967
ENSP00000368401-D1 Bos grunniens ENSP00000368401-D1 I 0.703
PAX4 Bos taurus ENSBTAG00000000410 I 0.967
PAX4 Callithrix jacchus ENSCJAG00000017652 I 0.978
PAX4 Canis familiaris ENSCAFG00000001719 I 0.978
PAX4 Cavia porcellus ENSCPOG00000006244 I 0.945
PAX6 Cavia porcellus ENSCPOG00000007245 I 0.703
ENSCSAG00000010195 Chlorocebus sabaeus ENSCSAG00000010195 I 0.972
PAX4 Choloepus hoffmanni ENSCHOG00000009265 I 0.926
pax6a Danio rerio ENSDARG00000103379 I 0.703
ENSDNOG00000030639 Dasypus novemcinctus ENSDNOG00000030639 I 0.945
Pax4 Dipodomys ordii ENSDORG00000000332 I 0.923
PAX4 Equus caballus ENSECAG00000008343 I 0.978
PAX4 Erinaceus europaeus ENSEEUG00000009616 I 0.945
PAX4 Felis catus ENSFCAG00000005485 I 0.962
PAX6 Felis catus ENSFCAG00000007094 I 0.703
pax6b Gasterosteus aculeatus ENSGACG00000016030 I 0.703
PAX4 Gorilla gorilla ENSGGOG00000002555 I 0.967
PAX6 Gorilla gorilla ENSGGOG00000010246 I 0.703
PAX4 Homo sapiens ENSG00000106331 D 0.962
ENSSTOG00000002127 Ictidomys tridecemlineatus ENSSTOG00000002127 I 0.945
PAX4 Loxodonta africana ENSLAFG00000005297 I 0.971
PAX6 Loxodonta africana ENSLAFG00000015520 I 0.703
ENSP00000368014 Macaca fascicularis ENSP00000368014 I 0.967
ENSP00000368424 Macaca fascicularis ENSP00000368424 I 0.703
PAX4 Macaca mulatta ENSMMUG00000015429 I 0.967
PAX4 Microcebus murinus ENSMICG00000000095 I 0.978
ENSMPUG00000006575 Mustela putorius furo ENSMPUG00000006575 I 0.962
Pax4 Mus musculus ENSMUSG00000029706 D 0.940
PAX4 Myotis lucifugus ENSMLUG00000030302 I 0.852
ENSNLEG00000017888 Nomascus leucogenys ENSNLEG00000017888 I 0.703
ENSNLEG00000012257 Nomascus leucogenys ENSNLEG00000012257 I 0.967
PAX4 Ochotona princeps ENSOPRG00000013381 I 0.959
ENSONIG00000005541 Oreochromis niloticus ENSONIG00000005541 I 0.703
PAX4 Ornithorhynchus anatinus ENSOANG00000000819 I 0.817
PAX6 Oryctolagus cuniculus ENSOCUG00000011075 I 0.703
PAX4 Oryctolagus cuniculus ENSOCUG00000001612 I 0.962
pax6b Oryzias latipes ENSORLG00000009913 I 0.709
PAX4 Otolemur garnettii ENSOGAG00000013348 I 0.956
PAX6 Otolemur garnettii ENSOGAG00000007857 I 0.703
ENSOARG00000001951 Ovis aries ENSOARG00000001951 I 0.973
PAX4 Pan troglodytes ENSPTRG00000019653 I 0.962
ENSPSIG00000012748 Pelodiscus sinensis ENSPSIG00000012748 I 0.703
ENSPFOG00000016987 Poecilia formosa ENSPFOG00000016987 I 0.703
ENSPPYG00000017971 Pongo abelii ENSPPYG00000017971 I 0.978
PAX4 Procavia capensis ENSPCAG00000016257 I 0.973
PAX4 Pteropus vampyrus ENSPVAG00000013944 I 0.973
Pax6 Rattus norvegicus ENSRNOG00000004410 I 0.703
Pax4 Rattus norvegicus ENSRNOG00000008020 I 0.951
ENSSHAG00000015143 Sarcophilus harrisii ENSSHAG00000015143 I 0.868
PAX4 Sorex araneus ENSSARG00000004842 I 0.917
PAX4 Sus scrofa ENSSSCG00000016591 I 0.967
pax6b Tetraodon nigroviridis ENSTNIG00000013804 I 0.703
PAX4 Tursiops truncatus ENSTTRG00000006056 I 0.949
PAX4 Vicugna pacos ENSVPAG00000008301 I 0.966
ENSXMAG00000016421 Xiphophorus maculatus ENSXMAG00000016421 I 0.703
ENSXMAG00000014260 Xiphophorus maculatus ENSXMAG00000014260 I 0.709