Pvit_13858 (Pogona vitticeps)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		Pvit_13858 T237728_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PAX2
M03294_2.00 		Homo sapiens
SGTCACGCWTSRNTGVNY
RNBCANYSAWGCGTGACS		 SELEX
Jolma et al.(2013)
PAX2_1 		0.968 0.968
PAX2
M05428_2.00 		Homo sapiens
NSGYYACGCNYSRNYRVNBN
NVNBYRNYSRNGCGTRRCSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_HT-SELEX 		0.968 0.968
PAX2
M10808_2.00 		Homo sapiens
NNHNRTYAHKBRHDMBBNN
NNVVKHDYVMDWRAYNDNN		 Transfac
Matys et al.(2006)
V$PAX2_01 		0.968 0.968
PAX2
M10809_2.00 		Homo sapiens
NDSTTTNNN
NNNAAASHN		 Transfac
Matys et al.(2006)
V$PAX2_02 		0.968 0.968
PAX2
M10810_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX2_Q2 		0.968 0.968
PAX2
M05429_2.00 		Homo sapiens
NSGTCACGCWTSANYGVNYN
NRNBCRNTSAWGCGTGACSN		 SELEX
Yin et al.(2017)
PAX2_eDBD_Methyl-HT-SELEX 		0.968 0.968
Pax2
M02690_2.00 		Mus musculus
NRTCAYKB
VMRTGAYN		 SELEX
Mathelier et al.(2014)
MA0067.1 		0.962 0.962
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pvit_13858 Paired box 6 131
Pvit_13858 Homeodomain 220 250

Links

Other Homeodomain,Paired box family TFs
Other Pogona vitticeps TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000005568 Chlorocebus sabaeus ENSCSAG00000005568 I 1.000
ENSSTOG00000011575 Ictidomys tridecemlineatus ENSSTOG00000011575 I 1.000
PAX2 Pteropus vampyrus ENSPVAG00000002148 I 0.968
PAX2 Macaca mulatta ENSMMUG00000009163 I 0.968
PAX2 Microcebus murinus ENSMICG00000001357 I 0.968
PAX2 Loxodonta africana ENSLAFG00000002388 I 0.968
PAX2 Sus scrofa ENSSSCG00000010556 I 0.968
ENSAMEG00000017523 Ailuropoda melanoleuca ENSAMEG00000017523 I 0.968
PAX2 Pan troglodytes ENSPTRG00000002853 I 0.968
ENSPANG00000021132 Papio anubis ENSPANG00000021132 I 0.968
PAX2 Procavia capensis ENSPCAG00000006623 I 0.968
PAX2 Ochotona princeps ENSOPRG00000007096 I 0.968
PAX2 Otolemur garnettii ENSOGAG00000015274 I 0.968
PAX2 Oryctolagus cuniculus ENSOCUG00000012860 I 0.968
Pax2 Mus musculus ENSMUSG00000004231 D 0.968
PAX2 Gorilla gorilla ENSGGOG00000014908 I 0.968
PAX2 Cavia porcellus ENSCPOG00000000939 I 0.968
PAX2 Dasypus novemcinctus ENSDNOG00000013328 I 0.968
ENSP00000359319 Macaca fascicularis ENSP00000359319 I 0.968
PAX2 Callithrix jacchus ENSCJAG00000017397 I 0.968
PAX2 Canis familiaris ENSCAFG00000009709 I 0.968
Myotis_brandtii_PAX2_10025650 Myotis brandtii Myotis_brandtii_PAX2_10025650 I 0.968
PAX2 Bos taurus ENSBTAG00000021566 I 0.968
PAX2 Equus caballus ENSECAG00000021123 I 0.968
PAX2 Erinaceus europaeus ENSEEUG00000001995 I 0.968
PAX2 Felis catus ENSFCAG00000011602 I 0.968
PAX2 Homo sapiens ENSG00000075891 D 0.968
ENSPPYG00000002572 Pongo abelii ENSPPYG00000002572 I 0.968
PAX2 Tursiops truncatus ENSTTRG00000015106 I 0.968
ENSP00000359319-D1 Bos grunniens ENSP00000359319-D1 I 0.968
Pax2 Rattus norvegicus ENSRNOG00000014253 I 0.962
ENSSHAG00000014328 Sarcophilus harrisii ENSSHAG00000014328 I 0.962
ENSMPUG00000016955 Mustela putorius furo ENSMPUG00000016955 I 0.962
PAX2 Monodelphis domestica ENSMODG00000019353 I 0.962
ENSMEUG00000013247 Macropus eugenii ENSMEUG00000013247 I 0.962
Gfo_R002455 Geospiza fortis Gfo_R002455 I 0.955
PAX2 Taeniopygia guttata ENSTGUG00000007620 I 0.955
Pax2 Dipodomys ordii ENSDORG00000006193 I 0.954
ENSFALG00000007308 Ficedula albicollis ENSFALG00000007308 I 0.949
PAX2 Echinops telfairi ENSETEG00000014765 I 0.949
PAX2 Myotis lucifugus ENSMLUG00000015106 I 0.949
CAA71206 Xenopus laevis CAA71206 I 0.942
pax2.L Xenopus laevis XB-GENE-486805 I 0.942
ENSLACG00000017470 Latimeria chalumnae ENSLACG00000017470 I 0.936
CAA04222 Xenopus laevis CAA04222 I 0.923
ENSLOCG00000012825 Lepisosteus oculatus ENSLOCG00000012825 I 0.885
ENSAPLG00000014579 Anas platyrhynchos ENSAPLG00000014579 I 0.878
fgenesh2_kg.scaffold_131000004 Branchiostoma floridae fgenesh2_kg.scaffold_131000004 I 0.814
Sakowv30045649m.g Saccoglossus kowalevskii Sakowv30045649m.g I 0.776
ENSOARG00000015552 Ovis aries ENSOARG00000015552 I 0.718