TF Information

Pvit_13858 *(Pogona vitticeps)* Homeodomain,Paired box
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00046 (Homeobox) PF00292 (PAX)	IPR001356 IPR001523	Pvit_13858	T237728_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PAX2 M03294_2.00	Homo sapiens	SGTCACGCWTSRNTGVNY	RNBCANYSAWGCGTGACS	SELEX Jolma et al.(2013) PAX2_1	0.968	0.968
PAX2 M05428_2.00	Homo sapiens	NSGYYACGCNYSRNYRVNBN	NVNBYRNYSRNGCGTRRCSN	SELEX Yin et al.(2017) PAX2_eDBD_HT-SELEX	0.968	0.968
PAX2 M10808_2.00	Homo sapiens	NNHNRTYAHKBRHDMBBNN	NNVVKHDYVMDWRAYNDNN	Transfac Matys et al.(2006) V$PAX2_01	0.968	0.968
PAX2 M10809_2.00	Homo sapiens	NDSTTTNNN	NNNAAASHN	Transfac Matys et al.(2006) V$PAX2_02	0.968	0.968
PAX2 M10810_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$PAX2_Q2	0.968	0.968
PAX2 M05429_2.00	Homo sapiens	NSGTCACGCWTSANYGVNYN	NRNBCRNTSAWGCGTGACSN	SELEX Yin et al.(2017) PAX2_eDBD_Methyl-HT-SELEX	0.968	0.968
Pax2 M02690_2.00	Mus musculus	NRTCAYKB	VMRTGAYN	SELEX Mathelier et al.(2014) MA0067.1	0.962	0.962
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Pvit_13858	Paired box	6	131	GHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVSHGCALSSRPGGYYETGSIKPGVIGGSKPKVATPKVVDKIAEYKRQNPTMFAWEIRDRLLAEGICDNDTVPSVSSINRIIR
Pvit_13858	Homeodomain	220	250	RADTFTQQQLEALDRVFERPSYPDVFQASEH

Links
Other Homeodomain,Paired box family TFs
Other *Pogona vitticeps* TFs

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50 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action