AARA005847 (Anopheles arabiensis)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
AARA005847 T237765_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
gsb-n
M03888_2.00
Drosophila melanogaster
SCGTRWCKAATB

VATTMGWYACGS
SELEX
Nitta et al.(2015)
gsb-n_1
0.857 0.857
gsb
M03889_2.00
Drosophila melanogaster
RATTMGTCACGSN

NSCGTGACKAATY
SELEX
Nitta et al.(2015)
gsb_1
0.838 0.838
gsb
M03890_2.00
Drosophila melanogaster
NNNAATCRATTWNN

NNWAATYGATTNNN
SELEX
Nitta et al.(2015)
gsb_2
0.838 0.838
gsb
M03891_2.00
Drosophila melanogaster
RTBDMTAATTGATTD

HAATCAATTAKHVAY
SELEX
Nitta et al.(2015)
gsb_3
0.838 0.838
gsb
M03892_2.00
Drosophila melanogaster
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
gsb_4
0.838 0.838
gsb
M03893_2.00
Drosophila melanogaster
NSCGTGACKAATBV

BVATTMGTCACGSN
SELEX
Nitta et al.(2015)
gsb_5
0.838 0.838
Pax7
M00541_2.00
Mus musculus
NNVATTWN

NWAATBNN
PBM
Berger et al.(2008)
Pax7_3783
0.792 0.792
PAX7
M03292_2.00
Homo sapiens
WAATYRATTA

TAATYRATTW
SELEX
Jolma et al.(2013)
PAX7_1
0.792 0.792
PAX7
M03293_2.00
Homo sapiens
TAATYGATTA

TAATCRATTA
SELEX
Jolma et al.(2013)
PAX7_2
0.792 0.792
prd
M03894_2.00
Drosophila melanogaster
VATTVGTCACGS

SCGTGACBAATB
SELEX
Nitta et al.(2015)
prd_1
0.792 0.792
prd
M03895_2.00
Drosophila melanogaster
NRATCRATYN

NRATYGATYN
SELEX
Nitta et al.(2015)
prd_2
0.792 0.792
PAX7
M05416_2.00
Homo sapiens
NDSCGTGACGAATYR

YRATTCGTCACGSHN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1
0.792 0.792
PAX7
M05417_2.00
Homo sapiens
NSGTCACGSHWRTTAN

NTAAYWDSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2
0.792 0.792
PAX7
M05418_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3
0.792 0.792
PAX7
M05422_2.00
Homo sapiens
BVATTMGTCACGSHN

NDSCGTGACKAATBV
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1
0.792 0.792
PAX7
M05423_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2
0.792 0.792
PAX7
M05424_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3
0.792 0.792
PAX7
M05874_2.00
Homo sapiens
ATTMGTYACGSHN

NDSCGTRACKAAT
SMiLE-seq
Isakova et al.(2017)
PAX7
0.792 0.792
prd
M06555_2.00
Drosophila melanogaster
HSWAACNGH

DCNGTTWSD
B1H
Mathelier et al.(2014)
MA0239.1
0.792 0.792
Pax7
M09586_2.00
Mus musculus
NNNNNYAATTDNNHAATTAN

NTAATTDNNHAATTRNNNNN
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1
0.792 0.792
Pax7
M09587_2.00
Mus musculus
DTAATYDGATTA

TAATCHRATTAH
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2
0.792 0.792
Pax7
M09588_2.00
Mus musculus
TAATTGATTW

WAATCAATTA
Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3
0.792 0.792
prd
M09684_2.00
Drosophila melanogaster
HMVNTHHKWMACGS

SCGTKWMDDANBKD
Misc
Kulakovskiy et al.(2009)
prd
0.792 0.792
prd
M10818_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$PRD_Q6
0.792 0.792
PAX7
M05419_2.00
Homo sapiens
NVATTVGTCRCGSYN

NRSCGYGACBAATBN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1
0.792 0.792
PAX7
M05420_2.00
Homo sapiens
NNGTCACGSHHRTTAN

NTAAYDDSCGTGACNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2
0.792 0.792
PAX7
M05421_2.00
Homo sapiens
NNAATCRATTWN

NWAATYGATTNN
SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3
0.792 0.792
PAX7
M05425_2.00
Homo sapiens
YRATTMGTCACGSHN

NDSCGTGACKAATYR
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1
0.792 0.792
PAX7
M05426_2.00
Homo sapiens
NSGTCACGSYWATTAN

NTAATWRSCGTGACSN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2
0.792 0.792
PAX7
M05427_2.00
Homo sapiens
NTAATYGATTAN

NTAATCRATTAN
SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3
0.792 0.792
PAX3
M00358_2.00
Homo sapiens
NRTNNNN

NNNNAYN
PBM
Barrera et al.(2016)
PAX3_REF
0.779 0.779
PAX3
M03297_2.00
Homo sapiens
TAATYRATTA

TAATYRATTA
SELEX
Jolma et al.(2013)
PAX3_1
0.779 0.779
PAX3
M03885_2.00
Homo sapiens
NNTAATYGATTANN

NNTAATCRATTANN
SELEX
Nitta et al.(2015)
PAX3_1
0.779 0.779
PAX3
M03886_2.00
Homo sapiens
RATTMGTCACGST

ASCGTGACKAATY
SELEX
Nitta et al.(2015)
PAX3_2
0.779 0.779
PAX3
M05438_2.00
Homo sapiens
NSGTCACGSHHATTAN

NTAATDDSCGTGACSN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1
0.779 0.779
PAX3
M05439_2.00
Homo sapiens
NDAATCRATTMN

NKAATYGATTHN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2
0.779 0.779
PAX3
M05440_2.00
Homo sapiens
NBRATTMGTCACGSHN

NDSCGTGACKAATYVN
SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3
0.779 0.779
PAX3
M09585_2.00
Homo sapiens
WSYRTGACWAATBNN

NNVATTWGTCAYRSW
Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063
0.779 0.779
PAX3
M10816_2.00
Homo sapiens
TCGTCACRCHYHM

KDRDGYGTGACGA
Transfac
Matys et al.(2006)
V$PAX3_01
0.779 0.779
PAX3
M10817_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX3_B
0.779 0.779
PAX3
M00352_2.00
Homo sapiens
VNTAATYR

YRATTANB
PBM
Barrera et al.(2016)
PAX3_G48R
0.779 0.779
PAX3
M00353_2.00
Homo sapiens
NNNNRTNNN

NNNAYNNNN
PBM
Barrera et al.(2016)
PAX3_N47H
0.779 0.779
PAX3
M00354_2.00
Homo sapiens
NNNRYNN

NNRYNNN
PBM
Barrera et al.(2016)
PAX3_N47K
0.779 0.779
PAX3
M00355_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_P50L
0.779 0.779
PAX3
M00357_2.00
Homo sapiens
NNNATNWNN

NNWNATNNN
PBM
Barrera et al.(2016)
PAX3_R56L
0.779 0.779
PAX3
M05441_2.00
Homo sapiens
NNGTCACGSHWRTTAN

NTAAYWDSCGTGACNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1
0.779 0.779
PAX3
M05442_2.00
Homo sapiens
NWAATCRATTAN

NTAATYGATTWN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2
0.779 0.779
PAX3
M05443_2.00
Homo sapiens
NNRATTVGTCRCGSHN

NDSCGYGACBAATYNN
SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3
0.779 0.779
PAX3
M00356_2.00
Homo sapiens
NNKWCAYDDWN

NWHHRTGWMNN
PBM
Barrera et al.(2016)
PAX3_R270C
0.773 0.773
PAX3
M00359_2.00
Homo sapiens
NTAATYRV

BYRATTAN
PBM
Barrera et al.(2016)
PAX3_Y90H
0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AARA005847-PA Paired box 1 97
AARA005847-PA Homeodomain 140 196

Links

Other Homeodomain,Paired box family TFs
Other Anopheles arabiensis TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACHR003306 Anopheles christyi ACHR003306 I 0.994
AQUA006728 Anopheles quadriannulatus AQUA006728 I 0.987
AMAM004970 Anopheles maculatus AMAM004970 I 0.987
ASIS005037 Anopheles sinensis ASIS005037 I 0.987
ADAC005776 Anopheles darlingi ADAC005776 I 0.974
Hsal_08388--XP_394847.3_APIME Harpegnathos saltator Hsal_08388--XP_394847.3_APIME I 0.903
BGIBMGA009025 Bombyx mori BGIBMGA009025 I 0.890
Cflo_06472--XP_394847.3_APIME Camponotus floridanus Cflo_06472--XP_394847.3_APIME I 0.877
ACYPI004907 Acyrthosiphon pisum ACYPI004907 I 0.870
CLEC002253 Cimex lectularius CLEC002253 I 0.870
AMEM007650 Anopheles merus AMEM007650 I 0.868
MCINX015564 Melitaea cinxia MCINX015564 I 0.861
LDEC019773 Leptinotarsa decemlineata LDEC019773 I 0.857
GJ21022 Drosophila virilis FBgn0208157 I 0.844
GH22657 Drosophila grimshawi FBgn0130115 I 0.844
Cflo_07008--XP_394847.3_APIME Camponotus floridanus Cflo_07008--XP_394847.3_APIME I 0.844
GL17644 Drosophila persimilis FBgn0155247 I 0.844
AFAF003749 Anopheles farauti AFAF003749 I 0.841
AEPI009865 Anopheles epiroticus AEPI009865 I 0.841
AFUN002669 Anopheles funestus AFUN002669 I 0.841
AMIN006552 Anopheles minimus AMIN006552 I 0.841
AGAP010358 Anopheles gambiae AGAP010358 I 0.841
ASTEI06722 Anopheles stephensi ASTEI06722 I 0.841
ACUA004518 Anopheles culicifacies ACUA004518 I 0.841
ADIR009744 Anopheles dirus ADIR009744 I 0.835
MDOA002110 Musca domestica MDOA002110 I 0.831
ACYPI002777 Acyrthosiphon pisum ACYPI002777 I 0.831
AATE003551 Anopheles atroparvus AATE003551 I 0.830
MCINX015565 Melitaea cinxia MCINX015565 I 0.829
Hsal_08389--XP_394848.3_APIME Harpegnathos saltator Hsal_08389--XP_394848.3_APIME I 0.825
AALB001247 Anopheles albimanus AALB001247 I 0.824
ACOM040804 Anopheles coluzzii ACOM040804 I 0.820
AMEC005923 Anopheles melas AMEC005923 I 0.820
Hsal_04609--XP_394847.3_APIME Harpegnathos saltator Hsal_04609--XP_394847.3_APIME I 0.818
CGI_10026438 Crassostrea gigas CGI_10026438 I 0.812
pax7a Gasterosteus aculeatus ENSGACG00000012890 I 0.805
ENSPFOG00000013988 Poecilia formosa ENSPFOG00000013988 I 0.805
ENSLOCG00000003864 Lepisosteus oculatus ENSLOCG00000003864 I 0.805
PAX7 Gasterosteus aculeatus ENSGACG00000001703 I 0.805
pax7a Danio rerio ENSDARG00000100398 I 0.805
ENSAMXG00000024811 Astyanax mexicanus ENSAMXG00000024811 I 0.805
ENSAMXG00000003799 Astyanax mexicanus ENSAMXG00000003799 I 0.805
pax7b Danio rerio ENSDARG00000070818 I 0.805
ENSGMOG00000001549 Gadus morhua ENSGMOG00000001549 I 0.805
pax7a Takifugu rubripes ENSTRUG00000015245 I 0.805
PAX7 Oryzias latipes ENSORLG00000004269 I 0.805
ENSONIG00000014283 Oreochromis niloticus ENSONIG00000014283 I 0.805
pax7a Tetraodon nigroviridis ENSTNIG00000014797 I 0.805
ENSPFOG00000016934 Poecilia formosa ENSPFOG00000016934 I 0.792
ENSPANG00000015169 Papio anubis ENSPANG00000015169 I 0.792
ENSLACG00000006342 Latimeria chalumnae ENSLACG00000006342 I 0.792
GJ23973 Drosophila virilis FBgn0211060 I 0.792
ENSCSAG00000000870 Chlorocebus sabaeus ENSCSAG00000000870 I 0.792
PAX7 Oryctolagus cuniculus ENSOCUG00000006146 I 0.792
GA19807 Drosophila pseudoobscura FBgn0079803 I 0.792
CPIJ006496 Culex quinquefasciatus CPIJ006496 I 0.780
CpipJ_CPIJ006496 Culex pipiens CpipJ_CPIJ006496 I 0.780
Pvit_18803 Pogona vitticeps Pvit_18803 I 0.779
PAX3 Oryctolagus cuniculus ENSOCUG00000017507 I 0.779
ENSPSIG00000005535 Pelodiscus sinensis ENSPSIG00000005535 I 0.779
PAX3 Anolis carolinensis ENSACAG00000004981 I 0.779
pax3a Danio rerio ENSDARG00000010192 I 0.779
ENSFALG00000012312 Ficedula albicollis ENSFALG00000012312 I 0.779
ENSXMAG00000012884 Xiphophorus maculatus ENSXMAG00000012884 I 0.779
ASTEI06723 Anopheles stephensi ASTEI06723 I 0.767
ENSCING00000005904 Ciona intestinalis ENSCING00000005904 I 0.766
SINV15888 Solenopsis invicta SINV15888 I 0.764
ENSCSAVG00000004794 Ciona savignyi ENSCSAVG00000004794 I 0.763
HMEL015048 Heliconius melpomene HMEL015048 I 0.753
ENSGMOG00000006159 Gadus morhua ENSGMOG00000006159 I 0.753
GB43792 Apis mellifera GB43792 I 0.753
DAPPUDRAFT_45999 Daphnia pulex DAPPUDRAFT_45999 I 0.753
PAX3 Tetraodon nigroviridis ENSTNIG00000015279 I 0.753
KGM_11699 Danaus plexippus KGM_11699 I 0.753
AGAP010359 Anopheles gambiae AGAP010359 I 0.753
AMEM003304 Anopheles merus AMEM003304 N 0.752
GI18478 Drosophila mojavensis FBgn0141217 I 0.749
TC006788 Tribolium castaneum TC006788 I 0.747
Brh_R006623 Buceros rhinoceros Brh_R006623 I 0.745
GJ21339 Drosophila virilis FBgn0208469 I 0.743
HelroG185509 Helobdella robusta HelroG185509 I 0.740
GK21727 Drosophila willistoni FBgn0223712 I 0.737
GL16831 Drosophila persimilis FBgn0154435 I 0.737
GE11387 Drosophila yakuba FBgn0229199 I 0.737
GM11765 Drosophila sechellia FBgn0166708 I 0.737
GD24898 Drosophila simulans FBgn0196214 I 0.737
GH23137 Drosophila grimshawi FBgn0130594 I 0.737
gsb-n Drosophila melanogaster FBgn0001147 D 0.737
GF11512 Drosophila ananassae FBgn0088552 I 0.737
GG19864 Drosophila erecta FBgn0112065 I 0.737
GA15432 Drosophila pseudoobscura FBgn0075449 I 0.737
PHUM375940 Pediculus humanus PHUM375940 I 0.736
PAX3 Pteropus vampyrus ENSPVAG00000007498 I 0.734
TC005342 Tribolium castaneum TC005342 I 0.732
MDOA008527 Musca domestica MDOA008527 I 0.731
PAX3 Tursiops truncatus ENSTTRG00000000379 I 0.727
PAX3 Echinops telfairi ENSETEG00000006800 I 0.727
GB54180 Apis mellifera GB54180 I 0.725
GF13361 Drosophila ananassae FBgn0090393 I 0.725
HMEL015047 Heliconius melpomene HMEL015047 I 0.721
GB43794 Apis mellifera GB43794 I 0.721
ISCW014979 Ixodes scapularis ISCW014979 I 0.720
LCUP011795 Lucilia cuprina LCUP011795 I 0.720
PAX3 Sus scrofa ENSSSCG00000028418 I 0.714
GI21167 Drosophila mojavensis FBgn0143898 I 0.714
GK21576 Drosophila willistoni FBgn0223568 I 0.714
MDOA004461 Musca domestica MDOA004461 I 0.709
GE14464 Drosophila yakuba FBgn0232069 I 0.709
GA17419 Drosophila pseudoobscura FBgn0077432 I 0.709
GD11918 Drosophila simulans FBgn0183657 I 0.709
gsb Drosophila melanogaster FBgn0001148 D 0.709
GG23031 Drosophila erecta FBgn0115188 I 0.709
GM11922 Drosophila sechellia FBgn0166863 I 0.709
LLOJ009941 Lutzomyia longipalpis LLOJ009941 I 0.703
PPAI006228 Phlebotomus papatasi PPAI006228 I 0.703
DAPPUDRAFT_15023 Daphnia pulex DAPPUDRAFT_15023 I 0.701