ACHR009845 (Anopheles christyi)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
ACHR009845 T237772_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
toy
M03899_2.00
Drosophila melanogaster
TTYACGCWTGASTGMACAN

NTGTKCASTCAWGCGTRAA
SELEX
Nitta et al.(2015)
toy_1
0.906 0.906
toy
M03900_2.00
Drosophila melanogaster
NTYACGCWTSAVTGMRCNN

NNGYKCABTSAWGCGTRAN
SELEX
Nitta et al.(2015)
toy_2
0.906 0.906
toy
M03901_2.00
Drosophila melanogaster
VATTANBHAYGSWYSRN

NYSRWSCRTDVNTAATB
SELEX
Nitta et al.(2015)
toy_3
0.906 0.906
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
0.901 0.901
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
0.901 0.901
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
0.901 0.901
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
0.901 0.901
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
0.901 0.901
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
0.901 0.901
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
0.901 0.901
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
0.901 0.901
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
0.901 0.901
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
0.901 0.901
PAX6
M00336_2.00
Homo sapiens
RTGCACAC

GTGTGCAY
PBM
Barrera et al.(2016)
PAX6_F258S
0.901 0.901
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
0.901 0.901
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
0.901 0.901
PAX6
M00335_2.00
Homo sapiens
BRNNNNNN

NNNNNNYV
PBM
Barrera et al.(2016)
PAX6_A79E
0.895 0.895
PAX6
M00337_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
PAX6_P118R
0.895 0.895
PAX6
M00338_2.00
Homo sapiens
WSGVRVDR

YHBYBCSW
PBM
Barrera et al.(2016)
PAX6_P68S
0.895 0.895
PAX6
M00339_2.00
Homo sapiens
NNNNSGKVGGHNN

NNDCCBMCSNNNN
PBM
Barrera et al.(2016)
PAX6_R128C
0.895 0.895
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.895 0.895
PAX6
M00341_2.00
Homo sapiens
BTSCCCSGSC

GSCSGGGSAV
PBM
Barrera et al.(2016)
PAX6_R26G
0.895 0.895
PAX6
M00343_2.00
Homo sapiens
NNNNCCCVKCNBN

NVNGMBGGGNNNN
PBM
Barrera et al.(2016)
PAX6_S119R
0.895 0.895
PAX6
M00344_2.00
Homo sapiens
NNMSASGBYNNN

NNNRVCSTSKNN
PBM
Barrera et al.(2016)
PAX6_V126D
0.895 0.895
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD

HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.883 0.883
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD

HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.883 0.883
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN

NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.883 0.883
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACHR009845-PA Paired box 20 144
ACHR009845-PA Homeodomain 238 284

Links

Other Homeodomain,Paired box family TFs
Other Anopheles christyi TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ASU_06962 Ascaris suum ASU_06962 N 0.000
Bm7459 Brugia malayi Bm7459 N 0.000
BTMF_0000953701 Brugia timori BTMF_0000953701 N 0.000
BXY_1512700 Bursaphelenchus xylophilus BXY_1512700 N 0.000
CBG06922 Caenorhabditis briggsae CBG06922 N 0.000
CRE15772 Caenorhabditis remanei CRE15772 N 0.000
DME_0000390001 Dracunculus medinensis DME_0000390001 N 0.000
EEL_0000068901 Elaeophora elaphi EEL_0000068901 N 0.000
ENSAPLG00000004964 Anas platyrhynchos ENSAPLG00000004964 I 0.000
ENSGMOG00000005788 Gadus morhua ENSGMOG00000005788 I 0.000
ENSGMOG00000012301 Gadus morhua ENSGMOG00000012301 I 0.000
ENSLOCG00000008478 Lepisosteus oculatus ENSLOCG00000008478 I 0.000
ENSMGAG00000001351 Meleagris gallopavo ENSMGAG00000001351 I 0.000
ENSPMAG00000009833 Petromyzon marinus ENSPMAG00000009833 I 0.000
EVEC_0000636701 Enterobius vermicularis EVEC_0000636701 N 0.000
HCOI00251100 Haemonchus contortus HCOI00251100 N 0.000
HCOI01543700 Haemonchus contortus HCOI01543700 N 0.000
HelroG186716 Helobdella robusta HelroG186716 I 0.000
HPBE_0002664601 Heligmosomoides bakeri HPBE_0002664601 N 0.000
L596_g26009 Steinernema carpocapsae L596_g26009 N 0.000
L892_g4529 Steinernema scapterisci L892_g4529 N 0.000
L893_g15060 Steinernema glaseri L893_g15060 N 0.000
L898_g14583 Steinernema monticolum L898_g14583 N 0.000
LOAG_01471 Loa loa LOAG_01471 N 0.000
maker-nMf.1.1.scaf00076-augustus-gene-0.21 Meloidogyne floridensis maker-nMf.1.1.scaf00076-augustus-gene-0.21 N 0.000
Minc06478 Meloidogyne incognita Minc06478 N 0.000
nAv.1.0.1.g05112 Acanthocheilonema viteae nAv.1.0.1.g05112 N 0.000
NBR_0000271401 Nippostrongylus brasiliensis NBR_0000271401 N 0.000
NBR_0000522801 Nippostrongylus brasiliensis NBR_0000522801 I 0.000
nLs.2.1.2.g02003 Litomosoides sigmodontis nLs.2.1.2.g02003 N 0.000
nOo.2.0.1.g00974 Onchocerca ochengi nOo.2.0.1.g00974 N 0.000
OFLC_0000052301 Onchocerca flexuosa OFLC_0000052301 N 0.000
PTRK_0000297300 Parastrongyloides trichosuri PTRK_0000297300 N 0.000
RSKR_0000082500 Rhabditophanes kr3021 RSKR_0000082500 N 0.000
sma-2 Caenorhabditis elegans WBGene00004856 N 0.000
SMAD9 Cavia porcellus ENSCPOG00000010255 I 0.000
smad9 Danio rerio ENSDARG00000021938 I 0.000
SMAD9 Taeniopygia guttata ENSTGUG00000011897 I 0.000
SMUV_0000477801 Syphacia muris SMUV_0000477801 N 0.000
SPAL_0001290200 Strongyloides papillosus SPAL_0001290200 N 0.000
SVE_0161800 Strongyloides venezuelensis SVE_0161800 N 0.000
TCLT_0000791701 Thelazia callipaeda TCLT_0000791701 N 0.000
WBGene00245189 Onchocerca volvulus WBGene00245189 N 0.000
WUBG_02400 Wuchereria bancrofti WUBG_02400 N 0.000