AMEM002691 (Anopheles merus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
AMEM002691 T237798_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
toy
M03899_2.00
Drosophila melanogaster
TTYACGCWTGASTGMACAN

NTGTKCASTCAWGCGTRAA
SELEX
Nitta et al.(2015)
toy_1
0.901 0.901
toy
M03900_2.00
Drosophila melanogaster
NTYACGCWTSAVTGMRCNN

NNGYKCABTSAWGCGTRAN
SELEX
Nitta et al.(2015)
toy_2
0.901 0.901
toy
M03901_2.00
Drosophila melanogaster
VATTANBHAYGSWYSRN

NYSRWSCRTDVNTAATB
SELEX
Nitta et al.(2015)
toy_3
0.901 0.901
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
0.895 0.895
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
0.895 0.895
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
0.895 0.895
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
0.895 0.895
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
0.895 0.895
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
0.895 0.895
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
0.895 0.895
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
0.895 0.895
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
0.895 0.895
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
0.895 0.895
PAX6
M00336_2.00
Homo sapiens
RTGCACAC

GTGTGCAY
PBM
Barrera et al.(2016)
PAX6_F258S
0.895 0.895
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
0.895 0.895
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
0.895 0.895
PAX6
M00335_2.00
Homo sapiens
BRNNNNNN

NNNNNNYV
PBM
Barrera et al.(2016)
PAX6_A79E
0.890 0.890
PAX6
M00337_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
PAX6_P118R
0.890 0.890
PAX6
M00338_2.00
Homo sapiens
WSGVRVDR

YHBYBCSW
PBM
Barrera et al.(2016)
PAX6_P68S
0.890 0.890
PAX6
M00339_2.00
Homo sapiens
NNNNSGKVGGHNN

NNDCCBMCSNNNN
PBM
Barrera et al.(2016)
PAX6_R128C
0.890 0.890
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.890 0.890
PAX6
M00341_2.00
Homo sapiens
BTSCCCSGSC

GSCSGGGSAV
PBM
Barrera et al.(2016)
PAX6_R26G
0.890 0.890
PAX6
M00343_2.00
Homo sapiens
NNNNCCCVKCNBN

NVNGMBGGGNNNN
PBM
Barrera et al.(2016)
PAX6_S119R
0.890 0.890
PAX6
M00344_2.00
Homo sapiens
NNMSASGBYNNN

NNNRVCSTSKNN
PBM
Barrera et al.(2016)
PAX6_V126D
0.890 0.890
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD

HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.878 0.878
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD

HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.878 0.878
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN

NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.878 0.878
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMEM002691-PA Paired box 20 144
AMEM002691-PA Homeodomain 238 284

Links

Other Homeodomain,Paired box family TFs
Other Anopheles merus TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_33210 Aegilops tauschii F775_33210 I 0.000
F775_25656 Aegilops tauschii F775_25656 I 0.000
F775_21760 Aegilops tauschii F775_21760 I 0.000
F775_20715 Aegilops tauschii F775_20715 I 0.000
AMTR_s00066p00120340 Amborella trichopoda AMTR_s00066p00120340 I 0.000
Aquca_058_00006 Aquilegia coerulea Aquca_058_00006 I 0.000
Aquca_007_00083 Aquilegia coerulea Aquca_007_00083 I 0.000
AS2 Arabidopsis lyrata fgenesh2_kg.2__796__AT1G65620.2 I 0.000
LBD10 Arabidopsis lyrata scaffold_400352.1 I 0.000
ASL1 Arabidopsis lyrata fgenesh2_kg.8__2729__AT5G66870.1 I 0.000
LBD6 Arabidopsis thaliana AT1G65620 D 0.000
LBD10 Arabidopsis thaliana AT2G23660 I 0.000
LBD36 Arabidopsis thaliana AT5G66870 I 0.000
Bostr.0568s0111 Boechera stricta Bostr.0568s0111 I 0.000
Bostr.26959s0351 Boechera stricta Bostr.26959s0351 I 0.000
Bostr.27895s0126 Boechera stricta Bostr.27895s0126 N 0.000
BRADI2G57380 Brachypodium distachyon BRADI2G57380 I 0.000
BRADI2G25270 Brachypodium distachyon BRADI2G25270 I 0.000
BRADI2G04270 Brachypodium distachyon BRADI2G04270 I 0.000
BRADI1G14677 Brachypodium distachyon BRADI1G14677 N 0.000
Bo2g051420 Brassica oleracea Bo2g051420 I 0.000
Bo4g151770 Brassica oleracea Bo4g151770 I 0.000
Bo2g167820 Brassica oleracea Bo2g167820 I 0.000
Bo7g085860 Brassica oleracea Bo7g085860 I 0.000
Bo7g064360 Brassica oleracea Bo7g064360 I 0.000
Bra012112 Brassica rapa Bra012112 I 0.000
Bra039733 Brassica rapa Bra039733 I 0.000
Bra032153 Brassica rapa Bra032153 I 0.000
Bra025294 Brassica rapa Bra025294 I 0.000
PK18922.1 Cannabis sativa PK18922.1 I 0.000
Cagra.10809s0001 Capsella grandiflora Cagra.10809s0001 I 0.000
Cagra.2475s0001 Capsella grandiflora Cagra.2475s0001 I 0.000
Cagra.20099s0001 Capsella grandiflora Cagra.20099s0001 I 0.000
Carubv10025704m.g Capsella rubella Carubv10025704m.g I 0.000
Carubv10026811m.g Capsella rubella Carubv10026811m.g I 0.000
Carubv10020974m.g Capsella rubella Carubv10020974m.g I 0.000
evm.TU.supercontig_39.110 Carica papaya evm.TU.supercontig_39.110 I 0.000
evm.TU.supercontig_6.423 Carica papaya evm.TU.supercontig_6.423 I 0.000
Ca_18206 Cicer arietinum Ca_18206 N 0.000
Ca_11161 Cicer arietinum Ca_11161 I 0.000
Ca_02125 Cicer arietinum Ca_02125 I 0.000
Ca_20200 Cicer arietinum Ca_20200 I 0.000
Ca_02124 Cicer arietinum Ca_02124 I 0.000
Cla003499 Citrullus lanatus Cla003499 I 0.000
Cla005851 Citrullus lanatus Cla005851 I 0.000
Cla020438 Citrullus lanatus Cla020438 I 0.000
Ciclev10027275m.g Citrus clementina Ciclev10027275m.g I 0.000
Ciclev10017910m.g Citrus clementina Ciclev10017910m.g I 0.000
orange1.1g027472m.g Citrus sinensis orange1.1g027472m.g I 0.000
orange1.1g039589m.g Citrus sinensis orange1.1g039589m.g I 0.000
Cucsa.098680 Cucumis sativus Cucsa.098680 I 0.000
Cucsa.178830 Cucumis sativus Cucsa.178830 I 0.000
Cucsa.250570 Cucumis sativus Cucsa.250570 I 0.000
Eucgr.C02148 Eucalyptus grandis Eucgr.C02148 I 0.000
Thhalv10004535m.g Eutrema salsugineum Thhalv10004535m.g I 0.000
Thhalv10019572m.g Eutrema salsugineum Thhalv10019572m.g I 0.000
Thhalv10005120m.g Eutrema salsugineum Thhalv10005120m.g I 0.000
Thhalv10000525m.g Eutrema salsugineum Thhalv10000525m.g I 0.000
gene21541-v1.0-hybrid Fragaria vesca gene21541-v1.0-hybrid I 0.000
gene24088-v1.0-hybrid Fragaria vesca gene24088-v1.0-hybrid I 0.000
GLYMA13G26020 Glycine max GLYMA13G26020 I 0.000
GLYMA11G17890 Glycine max GLYMA11G17890 I 0.000
GLYMA11G06210 Glycine max GLYMA11G06210 I 0.000
GLYMA15G36310 Glycine max GLYMA15G36310 I 0.000
GLYMA05G09950 Glycine max GLYMA05G09950 I 0.000
GLYMA04G11991 Glycine max GLYMA04G11991 I 0.000
GLYMA01G39060 Glycine max GLYMA01G39060 I 0.000
GLYMA06G11181 Glycine max GLYMA06G11181 I 0.000
Gorai.007G210500 Gossypium raimondii Gorai.007G210500 I 0.000
Gorai.008G073400 Gossypium raimondii Gorai.008G073400 I 0.000
Gorai.011G104600 Gossypium raimondii Gorai.011G104600 I 0.000
Gorai.007G350300 Gossypium raimondii Gorai.007G350300 I 0.000
MLOC_61156 Hordeum vulgare MLOC_61156 I 0.000
MLOC_72525 Hordeum vulgare MLOC_72525 I 0.000
LPERR01G34430 Leersia perrieri LPERR01G34430 I 0.000
LPERR01G04140 Leersia perrieri LPERR01G04140 I 0.000
LPERR03G21590 Leersia perrieri LPERR03G21590 I 0.000
Lus10009337.g Linum usitatissimum Lus10009337.g I 0.000
Lus10005313.g Linum usitatissimum Lus10005313.g I 0.000
Lus10013610.g Linum usitatissimum Lus10013610.g I 0.000
Lus10016769.g Linum usitatissimum Lus10016769.g I 0.000
Lus10019633.g Linum usitatissimum Lus10019633.g I 0.000
Lus10022463.g Linum usitatissimum Lus10022463.g I 0.000
chr2.LjT16G06.10.nd Lotus japonicus chr2.LjT16G06.10.nd I 0.000
MDP0000643326 Malus domestica MDP0000643326 I 0.000
MDP0000310871 Malus domestica MDP0000310871 I 0.000
MDP0000273432 Malus domestica MDP0000273432 I 0.000
MDP0000777060 Malus domestica MDP0000777060 I 0.000
MDP0000197526 Malus domestica MDP0000197526 I 0.000
MDP0000562305 Malus domestica MDP0000562305 I 0.000
cassava16840.m1 Manihot esculenta cassava16840.m1 I 0.000
cassava16846.m1 Manihot esculenta cassava16846.m1 I 0.000
cassava32690.m1 Manihot esculenta cassava32690.m1 I 0.000
cassava32691.m1 Manihot esculenta cassava32691.m1 I 0.000
cassava1141.valid.m1 Manihot esculenta cassava1141.valid.m1 I 0.000
MTR_3g452660 Medicago truncatula MTR_3g452660 N 0.000
MTR_3g073690 Medicago truncatula MTR_3g073690 I 0.000
MTR_8g040900 Medicago truncatula MTR_8g040900 I 0.000
MTR_5g017950 Medicago truncatula MTR_5g017950 I 0.000
mgf004296m Mimulus guttatus mgf004296m I 0.000
mgf014755m Mimulus guttatus mgf014755m I 0.000
GSMUA_Achr6G04670_001 Musa acuminata GSMUA_Achr6G04670_001 I 0.000
OBART01G04470 Oryza barthii OBART01G04470 I 0.000
OBART01G39990 Oryza barthii OBART01G39990 I 0.000
OB01G48740 Oryza brachyantha OB01G48740 I 0.000
OB03G34080 Oryza brachyantha OB03G34080 I 0.000
OB05G24560 Oryza brachyantha OB05G24560 I 0.000
OB01G14220 Oryza brachyantha OB01G14220 I 0.000
ORGLA01G0040900 Oryza glaberrima ORGLA01G0040900 I 0.000
ORGLA03G0240600 Oryza glaberrima ORGLA03G0240600 I 0.000
ORGLA05G0143500 Oryza glaberrima ORGLA05G0143500 I 0.000
ORGLA01G0339000 Oryza glaberrima ORGLA01G0339000 I 0.000
OGLUM03G26820 Oryza glumaepatula OGLUM03G26820 I 0.000
OGLUM01G04900 Oryza glumaepatula OGLUM01G04900 I 0.000
OGLUM01G44190 Oryza glumaepatula OGLUM01G44190 I 0.000
OGLUM05G17630 Oryza glumaepatula OGLUM05G17630 I 0.000
BGIOSGA013119 Oryza indica BGIOSGA013119 I 0.000
BGIOSGA018046 Oryza indica BGIOSGA018046 I 0.000
LBD6 Oryza indica BGIOSGA004955 I 0.000
OLONG_016086 Oryza longistaminata OLONG_016086 I 0.000
OMERI01G04420 Oryza meridionalis OMERI01G04420 I 0.000
OMERI01G36900 Oryza meridionalis OMERI01G36900 I 0.000
ONIVA11G15310 Oryza nivara ONIVA11G15310 I 0.000
ONIVA01G44840 Oryza nivara ONIVA01G44840 I 0.000
ONIVA01G04930 Oryza nivara ONIVA01G04930 I 0.000
OPUNC01G38680 Oryza punctata OPUNC01G38680 I 0.000
ORUFI03G26840 Oryza rufipogon ORUFI03G26840 I 0.000
ORUFI01G43320 Oryza rufipogon ORUFI01G43320 I 0.000
ORUFI05G17830 Oryza rufipogon ORUFI05G17830 I 0.000
ORUFI01G04670 Oryza rufipogon ORUFI01G04670 I 0.000
OS03G0612400 Oryza sativa OS03G0612400 I 0.000
LBD6 Oryza sativa OS01G0889400 I 0.000
OS01G0169400 Oryza sativa OS01G0169400 I 0.000
OS05G0417000 Oryza sativa OS05G0417000 I 0.000
Pavir.J38993 Panicum virgatum Pavir.J38993 I 0.000
Pavir.J22284 Panicum virgatum Pavir.J22284 I 0.000
Pavir.J16692 Panicum virgatum Pavir.J16692 I 0.000
Pavir.J09541 Panicum virgatum Pavir.J09541 I 0.000
Pavir.J03307 Panicum virgatum Pavir.J03307 I 0.000
Pavir.J03238 Panicum virgatum Pavir.J03238 I 0.000
Pavir.Ib03943 Panicum virgatum Pavir.Ib03943 I 0.000
Pavir.Eb00458 Panicum virgatum Pavir.Eb00458 I 0.000
Pavir.Ea03589 Panicum virgatum Pavir.Ea03589 I 0.000
gw1.170.40.1 Physcomitrella patens gw1.170.40.1 I 0.000
gw1.12.172.1 Physcomitrella patens gw1.12.172.1 I 0.000
gw1.170.36.1 Physcomitrella patens gw1.170.36.1 I 0.000
gw1.71.84.1 Physcomitrella patens gw1.71.84.1 I 0.000
POPTR_0010s18460 Populus trichocarpa POPTR_0010s18460 I 0.000
POPTR_0008s07930 Populus trichocarpa POPTR_0008s07930 I 0.000
POPTR_0007s11460 Populus trichocarpa POPTR_0007s11460 I 0.000
POPTR_0005s14150 Populus trichocarpa POPTR_0005s14150 I 0.000
Pm026450 Prunus mume Pm026450 I 0.000
Pm010483 Prunus mume Pm010483 I 0.000
PRUPE_ppa026393mg Prunus persica PRUPE_ppa026393mg I 0.000
PRUPE_ppa015145mg Prunus persica PRUPE_ppa015145mg I 0.000
PRUPE_ppa027059mg Prunus persica PRUPE_ppa027059mg I 0.000
29929.m004500 Ricinus communis 29929.m004500 I 0.000
29676.m001633 Ricinus communis 29676.m001633 I 0.000
SapurV1A.0641s0140 Salix purpurea SapurV1A.0641s0140 I 0.000
SapurV1A.0093s0490 Salix purpurea SapurV1A.0093s0490 I 0.000
SapurV1A.0164s0090 Salix purpurea SapurV1A.0164s0090 I 0.000
SapurV1A.0428s0090 Salix purpurea SapurV1A.0428s0090 I 0.000
SapurV1A.0811s0020 Salix purpurea SapurV1A.0811s0020 I 0.000
SapurV1A.0811s0010 Salix purpurea SapurV1A.0811s0010 I 0.000
Si036905m.g Setaria italica Si036905m.g I 0.000
Si024114m.g Setaria italica Si024114m.g I 0.000
Si002599m.g Setaria italica Si002599m.g I 0.000
Si002632m.g Setaria italica Si002632m.g I 0.000
Solyc11g008830.1 Solanum lycopersicum Solyc11g008830.1 I 0.000
Solyc03g063140.2 Solanum lycopersicum Solyc03g063140.2 I 0.000
Solyc02g090410.2 Solanum lycopersicum Solyc02g090410.2 I 0.000
Solyc02g065150.1 Solanum lycopersicum Solyc02g065150.1 I 0.000
PGSC0003DMG400000974 Solanum tuberosum PGSC0003DMG400000974 I 0.000
PGSC0003DMG402000764 Solanum tuberosum PGSC0003DMG402000764 I 0.000
PGSC0003DMG400010023 Solanum tuberosum PGSC0003DMG400010023 I 0.000
PGSC0003DMG401000764 Solanum tuberosum PGSC0003DMG401000764 I 0.000
Sb03g042310 Sorghum bicolor Sb03g042310 I 0.000
Sb03g004590 Sorghum bicolor Sb03g004590 I 0.000
Sb01g014650 Sorghum bicolor Sb01g014650 I 0.000
Sb09g020440 Sorghum bicolor Sb09g020440 I 0.000
TCM_000560 Theobroma cacao TCM_000560 I 0.000
TCM_024217 Theobroma cacao TCM_024217 I 0.000
Traes_1AL_4B89B33E3 Triticum aestivum Traes_1AL_4B89B33E3 I 0.000
Traes_4AL_C060BF9F6 Triticum aestivum Traes_4AL_C060BF9F6 I 0.000
Traes_4BS_C1F4F41E9 Triticum aestivum Traes_4BS_C1F4F41E9 I 0.000
Traes_4DS_72ABC3EE5 Triticum aestivum Traes_4DS_72ABC3EE5 I 0.000
Traes_1DL_1290B6A52 Triticum aestivum Traes_1DL_1290B6A52 I 0.000
TRAES3BF084400010CFD_g Triticum aestivum TRAES3BF084400010CFD_g I 0.000
TRIUR3_06488 Triticum urartu TRIUR3_06488 I 0.000
TRIUR3_23928 Triticum urartu TRIUR3_23928 I 0.000
TRIUR3_32863 Triticum urartu TRIUR3_32863 I 0.000
VIT_07s0197g00040 Vitis vinifera VIT_07s0197g00040 I 0.000
VIT_07s0197g00020 Vitis vinifera VIT_07s0197g00020 I 0.000
VIT_16s0022g02050 Vitis vinifera VIT_16s0022g02050 I 0.000
VIT_07s0197g00030 Vitis vinifera VIT_07s0197g00030 I 0.000
VIT_00s0215g00010 Vitis vinifera VIT_00s0215g00010 I 0.000
AS2 Vitis vinifera VIT_00s0340g00090 I 0.000
VIT_00s1247g00010 Vitis vinifera VIT_00s1247g00010 I 0.000
GRMZM2G362627 Zea mays GRMZM2G362627 I 0.000
GRMZM2G118250 Zea mays GRMZM2G118250 I 0.000
AC233943.1_FG002 Zea mays AC233943.1_FG002 I 0.000