AMIN002127 (Anopheles minimus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
AMIN002127 T237801_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ey
M03896_2.00
Drosophila melanogaster
CKAATTAD

HTAATTMG
SELEX
Nitta et al.(2015)
ey_1
0.874 0.874
ey
M03897_2.00
Drosophila melanogaster
HTAATCKMATTAD

HTAATKMGATTAD
SELEX
Nitta et al.(2015)
ey_2
0.874 0.874
ey
M03898_2.00
Drosophila melanogaster
WAAYYRRTTN

NAAYYRRTTW
SELEX
Nitta et al.(2015)
ey_3
0.874 0.874
PAX6
M00342_2.00
Homo sapiens
NNNRCDMATTANNN

NNNTAATKHGYNNN
PBM
Barrera et al.(2016)
PAX6_REF
0.863 0.863
Pax6
M00540_2.00
Mus musculus
CBAATTAA

TTAATTVG
PBM
Berger et al.(2008)
Pax6_3838
0.863 0.863
PAX6
M03291_2.00
Homo sapiens
DTWYACGCWTGANTGMDYH

DRHKCANTCAWGCGTRWAH
SELEX
Jolma et al.(2013)
PAX6_1
0.863 0.863
PAX6
M05412_2.00
Homo sapiens
NYACGCHYSRNYRMNYN

NRNKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_eDBD_HT-SELEX
0.863 0.863
PAX6
M05414_2.00
Homo sapiens
NYRCGCNYSRNYRVNYN

NRNBYRNYSRNGCGYRN
SELEX
Yin et al.(2017)
PAX6_FL_HT-SELEX
0.863 0.863
PAX6
M02689_2.00
Homo sapiens
TTYACGCWTSANTK

MANTSAWGCGTRAA
SELEX
Mathelier et al.(2014)
MA0069.1
0.863 0.863
PAX6
M09216_2.00
Homo sapiens
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_HUMAN.H11MO.0.C
0.863 0.863
Pax6
M09217_2.00
Mus musculus
TYMYRCWTSRNT

ANYSAWGYRKRA
Misc
Kulakovskiy et al.(2013)
PAX6_MOUSE.H11MO.0.C
0.863 0.863
PAX6
M10806_2.00
Homo sapiens
NHNNTTYACGCWTSANTKVHH

DDBMANTSAWGCGTRAANNDN
Transfac
Matys et al.(2006)
V$PAX6_01
0.863 0.863
PAX6
M10807_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PAX6_Q2
0.863 0.863
PAX6
M05413_2.00
Homo sapiens
DYRCGCWTSRNYRMNYN

NRNKYRNYSAWGCGYRH
SELEX
Yin et al.(2017)
PAX6_eDBD_Methyl-HT-SELEX
0.863 0.863
PAX6
M05415_2.00
Homo sapiens
NYACGCHYSRNYRMHYN

NRDKYRNYSRDGCGTRN
SELEX
Yin et al.(2017)
PAX6_FL_Methyl-HT-SELEX
0.863 0.863
PAX6
M00335_2.00
Homo sapiens
BRNNNNNN

NNNNNNYV
PBM
Barrera et al.(2016)
PAX6_A79E
0.857 0.857
PAX6
M00336_2.00
Homo sapiens
RTGCACAC

GTGTGCAY
PBM
Barrera et al.(2016)
PAX6_F258S
0.857 0.857
PAX6
M00337_2.00
Homo sapiens
NMTAATTANNN

NNNTAATTAKN
PBM
Barrera et al.(2016)
PAX6_P118R
0.857 0.857
PAX6
M00338_2.00
Homo sapiens
WSGVRVDR

YHBYBCSW
PBM
Barrera et al.(2016)
PAX6_P68S
0.857 0.857
PAX6
M00339_2.00
Homo sapiens
NNNNSGKVGGHNN

NNDCCBMCSNNNN
PBM
Barrera et al.(2016)
PAX6_R128C
0.857 0.857
PAX6
M00340_2.00
Homo sapiens
NNNNNRN

NYNNNNN
PBM
Barrera et al.(2016)
PAX6_R242T
0.857 0.857
PAX6
M00341_2.00
Homo sapiens
BTSCCCSGSC

GSCSGGGSAV
PBM
Barrera et al.(2016)
PAX6_R26G
0.857 0.857
PAX6
M00343_2.00
Homo sapiens
NNNNCCCVKCNBN

NVNGMBGGGNNNN
PBM
Barrera et al.(2016)
PAX6_S119R
0.857 0.857
PAX6
M00344_2.00
Homo sapiens
NNMSASGBYNNN

NNNRVCSTSKNN
PBM
Barrera et al.(2016)
PAX6_V126D
0.857 0.857
toy
M03899_2.00
Drosophila melanogaster
TTYACGCWTGASTGMACAN

NTGTKCASTCAWGCGTRAA
SELEX
Nitta et al.(2015)
toy_1
0.819 0.819
toy
M03900_2.00
Drosophila melanogaster
NTYACGCWTSAVTGMRCNN

NNGYKCABTSAWGCGTRAN
SELEX
Nitta et al.(2015)
toy_2
0.819 0.819
toy
M03901_2.00
Drosophila melanogaster
VATTANBHAYGSWYSRN

NYSRWSCRTDVNTAATB
SELEX
Nitta et al.(2015)
toy_3
0.819 0.819
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AMIN002127-PA Paired box 29 153
AMIN002127-PA Homeodomain 300 356

Links

Other Homeodomain,Paired box family TFs
Other Anopheles minimus TFs

181 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30190.m010807 Ricinus communis 30190.m010807 I 0.000
Aquca_013_00142 Aquilegia coerulea Aquca_013_00142 I 0.000
Bo1g037180 Brassica oleracea Bo1g037180 I 0.000
Bostr.25463s0218 Boechera stricta Bostr.25463s0218 I 0.000
Bostr.7867s0182 Boechera stricta Bostr.7867s0182 I 0.000
Bra013731 Brassica rapa Bra013731 I 0.000
Bra035256 Brassica rapa Bra035256 I 0.000
BRADI3G09690 Brachypodium distachyon BRADI3G09690 I 0.000
Cagra.1226s0043 Capsella grandiflora Cagra.1226s0043 I 0.000
Cagra.3839s0003 Capsella grandiflora Cagra.3839s0003 I 0.000
Carubv10000930m.g Capsella rubella Carubv10000930m.g I 0.000
Carubv10007590m.g Capsella rubella Carubv10007590m.g I 0.000
chr4.CM0025.190.nd Lotus japonicus chr4.CM0025.190.nd I 0.000
Ciclev10023918m.g Citrus clementina Ciclev10023918m.g I 0.000
Cla011101 Citrullus lanatus Cla011101 I 0.000
Cucsa.107270 Cucumis sativus Cucsa.107270 I 0.000
Eucgr.E00847 Eucalyptus grandis Eucgr.E00847 I 0.000
evm.TU.supercontig_122.41 Carica papaya evm.TU.supercontig_122.41 I 0.000
fgenesh2_kg.6__3081__AT4G11080.1 Arabidopsis lyrata fgenesh2_kg.6__3081__AT4G11080.1 I 0.000
gene32050-v1.0-hybrid Fragaria vesca gene32050-v1.0-hybrid I 0.000
GLYMA05G37010 Glycine max GLYMA05G37010 I 0.000
GLYMA08G02550 Glycine max GLYMA08G02550 N 0.000
Gorai.007G025500 Gossypium raimondii Gorai.007G025500 I 0.000
HMGB13 Arabidopsis thaliana AT4G11080 D 0.000
HMGB6 Arabidopsis thaliana AT4G23800 I 0.000
Lus10001909.g Linum usitatissimum Lus10001909.g I 0.000
Lus10003904.g Linum usitatissimum Lus10003904.g I 0.000
Lus10032379.g Linum usitatissimum Lus10032379.g I 0.000
MDP0000268093 Malus domestica MDP0000268093 I 0.000
mgf015439m Mimulus guttatus mgf015439m I 0.000
MTR_8g099305 Medicago truncatula MTR_8g099305 I 0.000
Pavir.J07596 Panicum virgatum Pavir.J07596 I 0.000
PGSC0003DMG400012298 Solanum tuberosum PGSC0003DMG400012298 I 0.000
PK10992.1 Cannabis sativa PK10992.1 I 0.000
Pm024077 Prunus mume Pm024077 I 0.000
POPTR_0001s10410 Populus trichocarpa POPTR_0001s10410 I 0.000
POPTR_0003s13780 Populus trichocarpa POPTR_0003s13780 I 0.000
PRUPE_ppa004611mg Prunus persica PRUPE_ppa004611mg I 0.000
SapurV1A.0035s0680 Salix purpurea SapurV1A.0035s0680 I 0.000
Sb04g009610 Sorghum bicolor Sb04g009610 I 0.000
Solyc08g082070.2 Solanum lycopersicum Solyc08g082070.2 I 0.000
TCM_016416 Theobroma cacao TCM_016416 I 0.000
Thhalv10025168m.g Eutrema salsugineum Thhalv10025168m.g I 0.000
Thhalv10028648m.g Eutrema salsugineum Thhalv10028648m.g I 0.000
VIT_02s0025g01220 Vitis vinifera VIT_02s0025g01220 I 0.000