AQUA006728 (Anopheles quadriannulatus)
Homeodomain,Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00046 (Homeobox)
PF00292 (PAX) 		IPR001356
IPR001523 		AQUA006728 T237804_2.00 Vectorbase (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gsb-n
M03888_2.00 		Drosophila melanogaster
SCGTRWCKAATB
VATTMGWYACGS		 SELEX
Nitta et al.(2015)
gsb-n_1 		0.857 0.857
gsb
M03889_2.00 		Drosophila melanogaster
RATTMGTCACGSN
NSCGTGACKAATY		 SELEX
Nitta et al.(2015)
gsb_1 		0.838 0.838
gsb
M03890_2.00 		Drosophila melanogaster
NNNAATCRATTWNN
NNWAATYGATTNNN		 SELEX
Nitta et al.(2015)
gsb_2 		0.838 0.838
gsb
M03891_2.00 		Drosophila melanogaster
RTBDMTAATTGATTD
HAATCAATTAKHVAY		 SELEX
Nitta et al.(2015)
gsb_3 		0.838 0.838
gsb
M03892_2.00 		Drosophila melanogaster
NNTAATYGATTANN
NNTAATCRATTANN		 SELEX
Nitta et al.(2015)
gsb_4 		0.838 0.838
gsb
M03893_2.00 		Drosophila melanogaster
NSCGTGACKAATBV
BVATTMGTCACGSN		 SELEX
Nitta et al.(2015)
gsb_5 		0.838 0.838
Pax7
M00541_2.00 		Mus musculus
NNVATTWN
NWAATBNN		 PBM
Berger et al.(2008)
Pax7_3783 		0.792 0.792
PAX7
M03292_2.00 		Homo sapiens
WAATYRATTA
TAATYRATTW		 SELEX
Jolma et al.(2013)
PAX7_1 		0.792 0.792
PAX7
M03293_2.00 		Homo sapiens
TAATYGATTA
TAATCRATTA		 SELEX
Jolma et al.(2013)
PAX7_2 		0.792 0.792
prd
M03894_2.00 		Drosophila melanogaster
VATTVGTCACGS
SCGTGACBAATB		 SELEX
Nitta et al.(2015)
prd_1 		0.792 0.792
prd
M03895_2.00 		Drosophila melanogaster
NRATCRATYN
NRATYGATYN		 SELEX
Nitta et al.(2015)
prd_2 		0.792 0.792
PAX7
M05416_2.00 		Homo sapiens
NDSCGTGACGAATYR
YRATTCGTCACGSHN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_1 		0.792 0.792
PAX7
M05417_2.00 		Homo sapiens
NSGTCACGSHWRTTAN
NTAAYWDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_2 		0.792 0.792
PAX7
M05418_2.00 		Homo sapiens
NNAATCRATTWN
NWAATYGATTNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_HT-SELEX_3 		0.792 0.792
PAX7
M05422_2.00 		Homo sapiens
BVATTMGTCACGSHN
NDSCGTGACKAATBV		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_1 		0.792 0.792
PAX7
M05423_2.00 		Homo sapiens
NSGTCACGSYWATTAN
NTAATWRSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_2 		0.792 0.792
PAX7
M05424_2.00 		Homo sapiens
NTAATYGATTAN
NTAATCRATTAN		 SELEX
Yin et al.(2017)
PAX7_FL_HT-SELEX_3 		0.792 0.792
PAX7
M05874_2.00 		Homo sapiens
ATTMGTYACGSHN
NDSCGTRACKAAT		 SMiLE-seq
Isakova et al.(2017)
PAX7 		0.792 0.792
prd
M06555_2.00 		Drosophila melanogaster
HSWAACNGH
DCNGTTWSD		 B1H
Mathelier et al.(2014)
MA0239.1 		0.792 0.792
Pax7
M09586_2.00 		Mus musculus
NNNNNYAATTDNNHAATTAN
NTAATTDNNHAATTRNNNNN		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_1 		0.792 0.792
Pax7
M09587_2.00 		Mus musculus
DTAATYDGATTA
TAATCHRATTAH		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_2 		0.792 0.792
Pax7
M09588_2.00 		Mus musculus
TAATTGATTW
WAATCAATTA		 Misc
Heinz et al.(2010)
Myoblast-Pax7_GSE25064_3 		0.792 0.792
prd
M09684_2.00 		Drosophila melanogaster
HMVNTHHKWMACGS
SCGTKWMDDANBKD		 Misc
Kulakovskiy et al.(2009)
prd 		0.792 0.792
prd
M10818_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$PRD_Q6 		0.792 0.792
PAX7
M05419_2.00 		Homo sapiens
NVATTVGTCRCGSYN
NRSCGYGACBAATBN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_1 		0.792 0.792
PAX7
M05420_2.00 		Homo sapiens
NNGTCACGSHHRTTAN
NTAAYDDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_2 		0.792 0.792
PAX7
M05421_2.00 		Homo sapiens
NNAATCRATTWN
NWAATYGATTNN		 SELEX
Yin et al.(2017)
PAX7_eDBD_Methyl-HT-SELEX_3 		0.792 0.792
PAX7
M05425_2.00 		Homo sapiens
YRATTMGTCACGSHN
NDSCGTGACKAATYR		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_1 		0.792 0.792
PAX7
M05426_2.00 		Homo sapiens
NSGTCACGSYWATTAN
NTAATWRSCGTGACSN		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_2 		0.792 0.792
PAX7
M05427_2.00 		Homo sapiens
NTAATYGATTAN
NTAATCRATTAN		 SELEX
Yin et al.(2017)
PAX7_FL_Methyl-HT-SELEX_3 		0.792 0.792
PAX3
M00358_2.00 		Homo sapiens
NRTNNNN
NNNNAYN		 PBM
Barrera et al.(2016)
PAX3_REF 		0.779 0.779
PAX3
M03297_2.00 		Homo sapiens
TAATYRATTA
TAATYRATTA		 SELEX
Jolma et al.(2013)
PAX3_1 		0.779 0.779
PAX3
M03885_2.00 		Homo sapiens
NNTAATYGATTANN
NNTAATCRATTANN		 SELEX
Nitta et al.(2015)
PAX3_1 		0.779 0.779
PAX3
M03886_2.00 		Homo sapiens
RATTMGTCACGST
ASCGTGACKAATY		 SELEX
Nitta et al.(2015)
PAX3_2 		0.779 0.779
PAX3
M05438_2.00 		Homo sapiens
NSGTCACGSHHATTAN
NTAATDDSCGTGACSN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_1 		0.779 0.779
PAX3
M05439_2.00 		Homo sapiens
NDAATCRATTMN
NKAATYGATTHN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_2 		0.779 0.779
PAX3
M05440_2.00 		Homo sapiens
NBRATTMGTCACGSHN
NDSCGTGACKAATYVN		 SELEX
Yin et al.(2017)
PAX3_eDBD_HT-SELEX_3 		0.779 0.779
PAX3
M09585_2.00 		Homo sapiens
WSYRTGACWAATBNN
NNVATTWGTCAYRSW		 Misc
Heinz et al.(2010)
Rh4-PAX3_FKHR_GSE19063 		0.779 0.779
PAX3
M10816_2.00 		Homo sapiens
TCGTCACRCHYHM
KDRDGYGTGACGA		 Transfac
Matys et al.(2006)
V$PAX3_01 		0.779 0.779
PAX3
M10817_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX3_B 		0.779 0.779
PAX3
M00352_2.00 		Homo sapiens
VNTAATYR
YRATTANB		 PBM
Barrera et al.(2016)
PAX3_G48R 		0.779 0.779
PAX3
M00353_2.00 		Homo sapiens
NNNNRTNNN
NNNAYNNNN		 PBM
Barrera et al.(2016)
PAX3_N47H 		0.779 0.779
PAX3
M00354_2.00 		Homo sapiens
NNNRYNN
NNRYNNN		 PBM
Barrera et al.(2016)
PAX3_N47K 		0.779 0.779
PAX3
M00355_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_P50L 		0.779 0.779
PAX3
M00357_2.00 		Homo sapiens
NNNATNWNN
NNWNATNNN		 PBM
Barrera et al.(2016)
PAX3_R56L 		0.779 0.779
PAX3
M05441_2.00 		Homo sapiens
NNGTCACGSHWRTTAN
NTAAYWDSCGTGACNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_1 		0.779 0.779
PAX3
M05442_2.00 		Homo sapiens
NWAATCRATTAN
NTAATYGATTWN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_2 		0.779 0.779
PAX3
M05443_2.00 		Homo sapiens
NNRATTVGTCRCGSHN
NDSCGYGACBAATYNN		 SELEX
Yin et al.(2017)
PAX3_eDBD_Methyl-HT-SELEX_3 		0.779 0.779
PAX3
M00356_2.00 		Homo sapiens
NNKWCAYDDWN
NWHHRTGWMNN		 PBM
Barrera et al.(2016)
PAX3_R270C 		0.773 0.773
PAX3
M00359_2.00 		Homo sapiens
NTAATYRV
BYRATTAN		 PBM
Barrera et al.(2016)
PAX3_Y90H 		0.773 0.773
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AQUA006728-PA Paired box 1 97
AQUA006728-PA Homeodomain 140 196

Links

Other Homeodomain,Paired box family TFs
Other Anopheles quadriannulatus TFs

158 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR003306 Anopheles christyi ACHR003306 I 0.994
AARA005847 Anopheles arabiensis AARA005847 I 0.987
AMAM004970 Anopheles maculatus AMAM004970 I 0.987
ADIR009744 Anopheles dirus ADIR009744 I 0.987
ASIS005037 Anopheles sinensis ASIS005037 I 0.987
ADAC005776 Anopheles darlingi ADAC005776 I 0.974
CPIJ006496 Culex quinquefasciatus CPIJ006496 I 0.929
CpipJ_CPIJ006496 Culex pipiens CpipJ_CPIJ006496 I 0.929
ACOM040804 Anopheles coluzzii ACOM040804 I 0.916
Hsal_08388--XP_394847.3_APIME Harpegnathos saltator Hsal_08388--XP_394847.3_APIME I 0.909
GB43792 Apis mellifera GB43792 I 0.896
BGIBMGA009025 Bombyx mori BGIBMGA009025 I 0.896
Cflo_06472--XP_394847.3_APIME Camponotus floridanus Cflo_06472--XP_394847.3_APIME I 0.883
ACYPI004907 Acyrthosiphon pisum ACYPI004907 I 0.877
CLEC002253 Cimex lectularius CLEC002253 I 0.877
AMEM007650 Anopheles merus AMEM007650 I 0.868
MCINX015564 Melitaea cinxia MCINX015564 I 0.868
LDEC019773 Leptinotarsa decemlineata LDEC019773 I 0.864
GJ21339 Drosophila virilis FBgn0208469 I 0.864
GH22657 Drosophila grimshawi FBgn0130115 I 0.844
GL17644 Drosophila persimilis FBgn0155247 I 0.844
GJ21022 Drosophila virilis FBgn0208157 I 0.844
Cflo_07008--XP_394847.3_APIME Camponotus floridanus Cflo_07008--XP_394847.3_APIME I 0.844
GB43794 Apis mellifera GB43794 I 0.844
ACUA004518 Anopheles culicifacies ACUA004518 I 0.841
AFUN002669 Anopheles funestus AFUN002669 I 0.841
AEPI009865 Anopheles epiroticus AEPI009865 I 0.841
AGAP010358 Anopheles gambiae AGAP010358 I 0.841
ASTEI06722 Anopheles stephensi ASTEI06722 I 0.841
MCINX015565 Melitaea cinxia MCINX015565 I 0.841
AFAF003749 Anopheles farauti AFAF003749 I 0.841
AMIN006552 Anopheles minimus AMIN006552 I 0.841
AATE003551 Anopheles atroparvus AATE003551 I 0.835
Hsal_08389--XP_394848.3_APIME Harpegnathos saltator Hsal_08389--XP_394848.3_APIME I 0.831
ACYPI002777 Acyrthosiphon pisum ACYPI002777 I 0.831
MDOA002110 Musca domestica MDOA002110 I 0.831
AALB001247 Anopheles albimanus AALB001247 I 0.824
AMEC005923 Anopheles melas AMEC005923 I 0.820
Hsal_04609--XP_394847.3_APIME Harpegnathos saltator Hsal_04609--XP_394847.3_APIME I 0.818
CGI_10026438 Crassostrea gigas CGI_10026438 I 0.812
tetur29g00530 Tetranychus urticae tetur29g00530 I 0.812
pax7a Takifugu rubripes ENSTRUG00000015245 I 0.805
pax7a Danio rerio ENSDARG00000100398 I 0.805
ENSPFOG00000013988 Poecilia formosa ENSPFOG00000013988 I 0.805
ENSONIG00000014283 Oreochromis niloticus ENSONIG00000014283 I 0.805
pax7a Tetraodon nigroviridis ENSTNIG00000014797 I 0.805
pax7b Danio rerio ENSDARG00000070818 I 0.805
PAX7 Oryzias latipes ENSORLG00000004269 I 0.805
ENSLOCG00000003864 Lepisosteus oculatus ENSLOCG00000003864 I 0.805
ENSAMXG00000024811 Astyanax mexicanus ENSAMXG00000024811 I 0.805
pax7a Gasterosteus aculeatus ENSGACG00000012890 I 0.805
ENSGMOG00000001549 Gadus morhua ENSGMOG00000001549 I 0.805
PAX7 Gasterosteus aculeatus ENSGACG00000001703 I 0.805
ENSAMXG00000003799 Astyanax mexicanus ENSAMXG00000003799 I 0.805
GF23439 Drosophila ananassae FBgn0100433 I 0.799
fgenesh2_kg.scaffold_211000002 Branchiostoma floridae fgenesh2_kg.scaffold_211000002 I 0.792
fgenesh2_kg.scaffold_259000002 Branchiostoma floridae fgenesh2_kg.scaffold_259000002 I 0.792
GH10195 Drosophila grimshawi FBgn0117676 I 0.792
GJ23973 Drosophila virilis FBgn0211060 I 0.792
GA19807 Drosophila pseudoobscura FBgn0079803 I 0.792
ENSPFOG00000016934 Poecilia formosa ENSPFOG00000016934 I 0.792
PAX7 Oryctolagus cuniculus ENSOCUG00000006146 I 0.792
ENSCSAG00000000870 Chlorocebus sabaeus ENSCSAG00000000870 I 0.792
ENSPANG00000015169 Papio anubis ENSPANG00000015169 I 0.792
ENSLACG00000006342 Latimeria chalumnae ENSLACG00000006342 I 0.792
PAX3 Microcebus murinus ENSMICG00000000336 I 0.779
PAX3 Felis catus ENSFCAG00000018967 I 0.779
ENSFALG00000012312 Ficedula albicollis ENSFALG00000012312 I 0.779
PAX3 Homo sapiens ENSG00000135903 D 0.779
ENSMEUG00000013628 Macropus eugenii ENSMEUG00000013628 I 0.779
ENSLOCG00000004189 Lepisosteus oculatus ENSLOCG00000004189 I 0.779
PAX3 Equus caballus ENSECAG00000014549 I 0.779
PAX3 Gorilla gorilla ENSGGOG00000015636 I 0.779
PAX3 Loxodonta africana ENSLAFG00000008041 I 0.779
ENSCSAG00000007841 Chlorocebus sabaeus ENSCSAG00000007841 I 0.779
PAX3 Bos taurus ENSBTAG00000009950 I 0.779
ENSAMEG00000007444 Ailuropoda melanoleuca ENSAMEG00000007444 I 0.779
PAX3 Anolis carolinensis ENSACAG00000004981 I 0.779
ENSBTAP00000013131-D1 Bos grunniens ENSBTAP00000013131-D1 I 0.779
PAX3 Canis familiaris ENSCAFG00000016041 I 0.779
Pvit_18803 Pogona vitticeps Pvit_18803 I 0.779
PAX3 Myotis lucifugus ENSMLUG00000014155 I 0.779
PAX3 Cavia porcellus ENSCPOG00000006276 I 0.779
PAX3 Callithrix jacchus ENSCJAG00000012088 I 0.779
pax3a Danio rerio ENSDARG00000010192 I 0.779
ENSLACG00000019159 Latimeria chalumnae ENSLACG00000019159 I 0.779
ENSPANG00000008818 Papio anubis ENSPANG00000008818 I 0.779
ENSSTOG00000008650 Ictidomys tridecemlineatus ENSSTOG00000008650 I 0.779
PAX3 Macaca mulatta ENSMMUG00000020409 I 0.779
PAX3 Tetraodon nigroviridis ENSTNIG00000014313 I 0.779
ENSSHAG00000016542 Sarcophilus harrisii ENSSHAG00000016542 I 0.779
Pax3 Rattus norvegicus ENSRNOG00000013670 I 0.779
ENSP00000375921 Macaca fascicularis ENSP00000375921 I 0.779
ENSPPYG00000013219 Pongo abelii ENSPPYG00000013219 I 0.779
ENSPSIG00000005535 Pelodiscus sinensis ENSPSIG00000005535 I 0.779
PAX3 Pan troglodytes ENSPTRG00000012969 I 0.779
PAX3 Otolemur garnettii ENSOGAG00000001304 I 0.779
PAX3 Tupaia belangeri ENSTBEG00000010268 I 0.779
ENSMPUG00000016673 Mustela putorius furo ENSMPUG00000016673 I 0.779
Pax3 Mus musculus ENSMUSG00000004872 I 0.779
PAX3 Oryctolagus cuniculus ENSOCUG00000017507 I 0.779
ENSNLEG00000009611 Nomascus leucogenys ENSNLEG00000009611 I 0.779
ENSXMAG00000012884 Xiphophorus maculatus ENSXMAG00000012884 I 0.779
ENSOARG00000020289 Ovis aries ENSOARG00000020289 I 0.779
PAX3 Monodelphis domestica ENSMODG00000021190 I 0.779
PAX3 Dasypus novemcinctus ENSDNOG00000001871 I 0.773
PAX7 Ochotona princeps ENSOPRG00000007352 I 0.773
ASTEI06723 Anopheles stephensi ASTEI06723 I 0.773
SINV15888 Solenopsis invicta SINV15888 I 0.769
ENSCING00000005904 Ciona intestinalis ENSCING00000005904 I 0.766
ENSPFOG00000007769 Poecilia formosa ENSPFOG00000007769 I 0.766
ENSCSAVG00000004794 Ciona savignyi ENSCSAVG00000004794 I 0.766
KGM_11699 Danaus plexippus KGM_11699 I 0.758
HMEL015048 Heliconius melpomene HMEL015048 I 0.758
DAPPUDRAFT_334067 Daphnia pulex DAPPUDRAFT_334067 I 0.753
AGAP010359 Anopheles gambiae AGAP010359 I 0.753
PAX3 Tetraodon nigroviridis ENSTNIG00000015279 I 0.753
DAPPUDRAFT_45999 Daphnia pulex DAPPUDRAFT_45999 I 0.753
TC006788 Tribolium castaneum TC006788 I 0.753
ENSGMOG00000006159 Gadus morhua ENSGMOG00000006159 I 0.753
AMEM003304 Anopheles merus AMEM003304 N 0.752
GI18478 Drosophila mojavensis FBgn0141217 I 0.749
Brh_R006623 Buceros rhinoceros Brh_R006623 I 0.745
PHUM375940 Pediculus humanus PHUM375940 I 0.742
HelroG185509 Helobdella robusta HelroG185509 I 0.740
gsb-n Drosophila melanogaster FBgn0001147 D 0.737
GL16831 Drosophila persimilis FBgn0154435 I 0.737
GM11765 Drosophila sechellia FBgn0166708 I 0.737
TC005342 Tribolium castaneum TC005342 I 0.737
GG19864 Drosophila erecta FBgn0112065 I 0.737
GA15432 Drosophila pseudoobscura FBgn0075449 I 0.737
GF11512 Drosophila ananassae FBgn0088552 I 0.737
GD24898 Drosophila simulans FBgn0196214 I 0.737
GH23137 Drosophila grimshawi FBgn0130594 I 0.737
GE11387 Drosophila yakuba FBgn0229199 I 0.737
GK21727 Drosophila willistoni FBgn0223712 I 0.737
PAX3 Pteropus vampyrus ENSPVAG00000007498 I 0.734
MDOA008527 Musca domestica MDOA008527 I 0.731
PAX3 Echinops telfairi ENSETEG00000006800 I 0.727
PAX3 Tursiops truncatus ENSTTRG00000000379 I 0.727
HMEL015047 Heliconius melpomene HMEL015047 I 0.726
GF13361 Drosophila ananassae FBgn0090393 I 0.725
GB54180 Apis mellifera GB54180 I 0.725
ISCW014979 Ixodes scapularis ISCW014979 I 0.720
LCUP011795 Lucilia cuprina LCUP011795 I 0.720
PAX3 Sus scrofa ENSSSCG00000028418 I 0.714
GI21167 Drosophila mojavensis FBgn0143898 I 0.714
GK21576 Drosophila willistoni FBgn0223568 I 0.714
MDOA004461 Musca domestica MDOA004461 I 0.709
GG23031 Drosophila erecta FBgn0115188 I 0.709
GA17419 Drosophila pseudoobscura FBgn0077432 I 0.709
GD11918 Drosophila simulans FBgn0183657 I 0.709
gsb Drosophila melanogaster FBgn0001148 D 0.709
GE14464 Drosophila yakuba FBgn0232069 I 0.709
GM11922 Drosophila sechellia FBgn0166863 I 0.709
LLOJ009941 Lutzomyia longipalpis LLOJ009941 I 0.703
PPAI006228 Phlebotomus papatasi PPAI006228 I 0.703
DAPPUDRAFT_15023 Daphnia pulex DAPPUDRAFT_15023 I 0.701