CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HPBE_0001307101
(
Heligmosomoides bakeri
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
HPBE_0001307101
T237853_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPBE_0001307101-mRNA-1
Paired box
13
138
GQGRVNQLGGVFINGRPLPQAVRVQIIEMASKGVKPCHISRQLRVSHGAVSKILNRYAETGSISPGQIGGNPRTKISLHSIEKQLMLTYEENPNLCAAELRQLLIEQEVCSRATAPTVASINRFIR
HPBE_0001307101-mRNA-1
Homeodomain
216
261
RRNRTSFSAEQLETLENAFKSNTYPDAGERETIARQTGLSEEKIMA
HPBE_0001307101-mRNA-1
Homeodomain
278
293
TRFQTWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Heligmosomoides bakeri
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TELCIR_00729
Teladorsagia circumcincta
TELCIR_00729
N
0.872
HPLM_0000710501
Haemonchus placei
HPLM_0000710501
N
0.861
HCOI01507400
Haemonchus contortus
HCOI01507400
N
0.861
ACOC_0000203501
Angiostrongylus costaricensis
ACOC_0000203501
N
0.861
ACAC_0000839201
Angiostrongylus cantonensis
ACAC_0000839201
N
0.861