CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L596_g28013
(
Steinernema carpocapsae
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
L596_g28013
T237857_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L596_g28013.t1
Paired box
15
140
GQGRVNQLGGVFINGRPLPHPTRVQIIEMAKHGVKPCQISRQLKVSHGAVSKILNRYAETGSVSPGQIGGNPRSRLSIQSVEKHILQIKEENPGICANDIRELLIEQLVCSRQNAPTVSSINRHLR
L596_g28013.t1
Homeodomain
222
278
RRNRTSFTTKQLETLENAFKLNSYPDATERENIAKSTNLNEDKIMTWFSNRRARNRK
L596_g28013.t2
Paired box
2
127
GQGRVNQLGGVFINGRPLPHPTRVQIIEMAKHGVKPCQISRQLKVSHGAVSKILNRYAETGSVSPGQIGGNPRSRLSIQSVEKHILQIKEENPGICANDIRELLIEQLVCSRQNAPTVSSINRHLR
L596_g28013.t2
Homeodomain
211
267
RRNRTSFTTKQLETLENAFKLNSYPDATERENIAKSTNLNEDKIMTWFSNRRARNRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Steinernema carpocapsae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L892_g7002
Steinernema scapterisci
L892_g7002
N
0.989
L898_g1097
Steinernema monticolum
L898_g1097
N
0.973
L889_g18440
Steinernema feltiae
L889_g18440
N
0.962
L893_g26110
Steinernema glaseri
L893_g26110
N
0.956
HCOI01507400
Haemonchus contortus
HCOI01507400
N
0.775
HPLM_0000710501
Haemonchus placei
HPLM_0000710501
N
0.775
ACAC_0000839201
Angiostrongylus cantonensis
ACAC_0000839201
N
0.753
ACOC_0000203501
Angiostrongylus costaricensis
ACOC_0000203501
N
0.747
nDi.2.2.2.g00518
Dirofilaria immitis
nDi.2.2.2.g00518
N
0.747
Bm3656
Brugia malayi
Bm3656
N
0.742
SMUV_0000066201
Syphacia muris
SMUV_0000066201
N
0.742
TELCIR_00729
Teladorsagia circumcincta
TELCIR_00729
N
0.703