CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nAv.1.0.1.g05397
(
Acanthocheilonema viteae
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
nAv.1.0.1.g05397
T237874_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nAv.1.0.1.t05397-RA
Paired box
40
165
GQGRVNQLGGIFINGRPLPQHIRLKIVEMATNGVKPCHISRQLRVSHGCVSKILYRYAETGSVSPGQIGGNPRLRKTILALEEHIARIRQDQPTLNAHEIRLMLIDKGICSRSNAPTISSIHKYMR
nAv.1.0.1.t05397-RA
Homeodomain
226
282
RRNRTSFTQEQLEVLEAAFKANTYPDQELRERLAAATKLDEGKIQVWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Acanthocheilonema viteae
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy