CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g02365
(
Litomosoides sigmodontis
)
Homeodomain,Paired box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00046 (Homeobox)
PF00292 (PAX)
IPR001356
IPR001523
nLs.2.1.2.g02365
T237877_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t02365-RA
Paired box
105
230
GQGRVNQLGGVFINGRPLPQHIRLKIVEMATNGVKPCHISRQLRVSHGCVSKILYRYAETGSVSPGQIGGNPRSRKTILALEEHVARIRHERPTINAHEIRLTLIDKGICSRSNAPTISSIHKYMR
nLs.2.1.2.t02365-RA
Homeodomain
291
347
RRNRTSFTQEQLEILEAAFKANTYPDQELRERLAAATKLDEGKIQVWFSNRRARCRK
Links
Other
Homeodomain,Paired box
family TFs
Other
Litomosoides sigmodontis
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LOAG_16736
Loa loa
LOAG_16736
N
0.962
BTMF_0000840501
Brugia timori
BTMF_0000840501
N
0.951
Bm10054
Brugia malayi
Bm10054
N
0.951
nAv.1.0.1.g05397
Acanthocheilonema viteae
nAv.1.0.1.g05397
N
0.951
nDi.2.2.2.g00519
Dirofilaria immitis
nDi.2.2.2.g00519
N
0.940
WUBG_00484
Wuchereria bancrofti
WUBG_00484
N
0.940
TCLT_0000479901
Thelazia callipaeda
TCLT_0000479901
N
0.819
ASU_06308
Ascaris suum
ASU_06308
N
0.775
DME_0000433801
Dracunculus medinensis
DME_0000433801
N
0.773
PAX7
Choloepus hoffmanni
ENSCHOG00000005130
I
0.733
ENSVPAG00000012251
Vicugna pacos
ENSVPAG00000012251
I
0.733
L596_g28015
Steinernema carpocapsae
L596_g28015
N
0.731
L893_g19326
Steinernema glaseri
L893_g19326
N
0.714
nDi.2.2.2.g00518
Dirofilaria immitis
nDi.2.2.2.g00518
N
0.714
L889_g18441
Steinernema feltiae
L889_g18441
N
0.709
Bm3656
Brugia malayi
Bm3656
N
0.709
SMUV_0000066201
Syphacia muris
SMUV_0000066201
N
0.703